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INSTALL report for branchpointer on tokay2

This page was generated on 2019-04-09 12:30:28 -0400 (Tue, 09 Apr 2019).

Package 182/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
branchpointer 1.9.0
Beth Signal
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/branchpointer
Branch: master
Last Commit: 63d1418
Last Changed Date: 2018-10-30 11:54:37 -0400 (Tue, 30 Oct 2018)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: branchpointer
Version: 1.9.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/branchpointer_1.9.0.tar.gz && rm -rf branchpointer.buildbin-libdir && mkdir branchpointer.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=branchpointer.buildbin-libdir branchpointer_1.9.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL branchpointer_1.9.0.zip && rm branchpointer_1.9.0.tar.gz branchpointer_1.9.0.zip
StartedAt: 2019-04-08 20:29:23 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 20:31:02 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 98.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/branchpointer_1.9.0.tar.gz && rm -rf branchpointer.buildbin-libdir && mkdir branchpointer.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=branchpointer.buildbin-libdir branchpointer_1.9.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL branchpointer_1.9.0.zip && rm branchpointer_1.9.0.tar.gz branchpointer_1.9.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 4715k  100 4715k    0     0  45.7M      0 --:--:-- --:--:-- --:--:-- 48.9M

install for i386

* installing *source* package 'branchpointer' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'branchpointer'
    finding HTML links ... done
    exonsToIntrons                          html  
    getBranchpointSequence                  html  
    getCanonical3SS                         html  
    getExonDists                            html  
    getPPT                                  html  
    getQueryLoc                             html  
    gtfToExons                              html  
    makeBranchpointWindowForExons           html  
    makeBranchpointWindowForSNP             html  
    plotBranchpointWindow                   html  
    plotStructure                           html  
    predictBranchpoints                     html  
    predictionsToSummary                    html  
    readQueryFile                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'branchpointer' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'branchpointer' as branchpointer_1.9.0.zip
* DONE (branchpointer)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'branchpointer' successfully unpacked and MD5 sums checked