Back to Multiple platform build/check report for BioC 3.9
AB[C]DEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for CancerSubtypes on tokay2

This page was generated on 2019-04-09 12:27:05 -0400 (Tue, 09 Apr 2019).

Package 206/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CancerSubtypes 1.9.0
Taosheng Xu
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/CancerSubtypes
Branch: master
Last Commit: 0e61488
Last Changed Date: 2018-10-30 11:54:36 -0400 (Tue, 30 Oct 2018)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: CancerSubtypes
Version: 1.9.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CancerSubtypes_1.9.0.tar.gz && rm -rf CancerSubtypes.buildbin-libdir && mkdir CancerSubtypes.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CancerSubtypes.buildbin-libdir CancerSubtypes_1.9.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CancerSubtypes_1.9.0.zip && rm CancerSubtypes_1.9.0.tar.gz CancerSubtypes_1.9.0.zip
StartedAt: 2019-04-08 20:38:40 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 20:39:40 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 60.1 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CancerSubtypes_1.9.0.tar.gz && rm -rf CancerSubtypes.buildbin-libdir && mkdir CancerSubtypes.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CancerSubtypes.buildbin-libdir CancerSubtypes_1.9.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CancerSubtypes_1.9.0.zip && rm CancerSubtypes_1.9.0.tar.gz CancerSubtypes_1.9.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1873k  100 1873k    0     0  17.5M      0 --:--:-- --:--:-- --:--:-- 18.8M

install for i386

* installing *source* package 'CancerSubtypes' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CancerSubtypes'
    finding HTML links ... done
    DiffExp.limma                           html  
    ExecuteCC                               html  
    ExecuteCNMF                             html  
    finding level-2 HTML links ... done

    ExecuteSNF.CC                           html  
    ExecuteSNF                              html  
    ExecuteWSNF                             html  
    ExecuteiCluster                         html  
    FSbyCox                                 html  
    FSbyMAD                                 html  
    FSbyPCA                                 html  
    FSbyVar                                 html  
    GeneExp                                 html  
    Ranking                                 html  
    data.checkDistribution                  html  
    data.imputation                         html  
    data.normalization                      html  
    drawHeatmap                             html  
    miRNAExp                                html  
    saveFigure                              html  
    sigclustTest                            html  
    silhouette_SimilarityMatrix             html  
    spectralAlg                             html  
    status                                  html  
    survAnalysis                            html  
    time                                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CancerSubtypes' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CancerSubtypes' as CancerSubtypes_1.9.0.zip
* DONE (CancerSubtypes)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'CancerSubtypes' successfully unpacked and MD5 sums checked