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INSTALL report for adaptest on tokay1

This page was generated on 2019-04-13 11:29:05 -0400 (Sat, 13 Apr 2019).

Package 16/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
adaptest 1.2.0
Weixin Cai
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/adaptest
Branch: RELEASE_3_8
Last Commit: 5c7b540
Last Changed Date: 2018-10-31 02:36:56 -0400 (Wed, 31 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: adaptest
Version: 1.2.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/adaptest_1.2.0.tar.gz && rm -rf adaptest.buildbin-libdir && mkdir adaptest.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=adaptest.buildbin-libdir adaptest_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL adaptest_1.2.0.zip && rm adaptest_1.2.0.tar.gz adaptest_1.2.0.zip
StartedAt: 2019-04-12 19:39:03 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 19:40:13 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 69.9 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/adaptest_1.2.0.tar.gz && rm -rf adaptest.buildbin-libdir && mkdir adaptest.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=adaptest.buildbin-libdir adaptest_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL adaptest_1.2.0.zip && rm adaptest_1.2.0.tar.gz adaptest_1.2.0.zip
###
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install for i386

* installing *source* package 'adaptest' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'adaptest'
    finding HTML links ... done
    adapTMLE-class                          html  
    adaptest                                html  
    adaptest_old                            html  
    bioadaptest                             html  
    cv_param_est                            html  
    data_adapt                              html  
    get_composition                         html  
    get_pval                                html  
    get_results_adaptmle                    html  
    get_significant_biomarker               html  
    plot.data_adapt                         html  
    print.data_adapt                        html  
    rank_DE                                 html  
    rank_ttest                              html  
    simulated_array                         html  
    simulated_treatment                     html  
    summary.data_adapt                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'adaptest' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'adaptest' as adaptest_1.2.0.zip
* DONE (adaptest)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'adaptest' successfully unpacked and MD5 sums checked
In R CMD INSTALL