Back to Multiple platform build/check report for BioC 3.8
A[B]CDEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for Basic4Cseq on tokay1

This page was generated on 2019-04-13 11:23:36 -0400 (Sat, 13 Apr 2019).

Package 100/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Basic4Cseq 1.18.1
Carolin Walter
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/Basic4Cseq
Branch: RELEASE_3_8
Last Commit: ade9a72
Last Changed Date: 2019-01-04 13:19:54 -0400 (Fri, 04 Jan 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: Basic4Cseq
Version: 1.18.1
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/Basic4Cseq_1.18.1.tar.gz && rm -rf Basic4Cseq.buildbin-libdir && mkdir Basic4Cseq.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Basic4Cseq.buildbin-libdir Basic4Cseq_1.18.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL Basic4Cseq_1.18.1.zip && rm Basic4Cseq_1.18.1.tar.gz Basic4Cseq_1.18.1.zip
StartedAt: 2019-04-12 19:57:46 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 19:59:05 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 79.0 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/Basic4Cseq_1.18.1.tar.gz && rm -rf Basic4Cseq.buildbin-libdir && mkdir Basic4Cseq.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Basic4Cseq.buildbin-libdir Basic4Cseq_1.18.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL Basic4Cseq_1.18.1.zip && rm Basic4Cseq_1.18.1.tar.gz Basic4Cseq_1.18.1.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  218k  100  218k    0     0  4317k      0 --:--:-- --:--:-- --:--:-- 4647k

install for i386

* installing *source* package 'Basic4Cseq' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Basic4Cseq'
    finding HTML links ... done
    Data4Cseq-class                         html  
    Data4Cseq                               html  
    checkRestrictionEnzymeSequence          html  
    chooseNearCisFragments                  html  
    createVirtualFragmentLibrary            html  
    drawDigestionFragmentHistogram          html  
    drawHeatmap                             html  
    exportVisualizationFragmentData         html  
    getReadDistribution                     html  
    giveEnzymeSequence                      html  
    importVisualizationFragmentData         html  
    liverData                               html  
    liverDataRaw                            html  
    normalizeFragmentData                   html  
    plotTransInteractions                   html  
    prepare4CseqData                        html  
    printBEDFragmentLibrary                 html  
    printWigFile                            html  
    readPointsOfInterestFile                html  
    readsToFragments                        html  
    simulateDigestion                       html  
    visualizeViewpoint                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'Basic4Cseq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Basic4Cseq' as Basic4Cseq_1.18.1.zip
* DONE (Basic4Cseq)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'Basic4Cseq' successfully unpacked and MD5 sums checked
In R CMD INSTALL