Tsu-Pei Chiu
| Snapshot Date: 2019-04-15 17:01:12 -0400 (Mon, 15 Apr 2019) |
| URL: https://git.bioconductor.org/packages/DNAshapeR |
| Branch: RELEASE_3_8 |
| Last Commit: d61d7d8 |
| Last Changed Date: 2018-10-30 11:42:00 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-16 11:59:25 -0400 (Tue, 16 Apr 2019).
| Package 427/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| DNAshapeR 1.10.0 Tsu-Pei Chiu
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | [ OK ] | |
| Package: DNAshapeR |
| Version: 1.10.0 |
| Command: rm -rf DNAshapeR.buildbin-libdir && mkdir DNAshapeR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh DNAshapeR_1.10.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R DNAshapeR.buildbin-libdir |
| StartedAt: 2019-04-16 03:58:13 -0400 (Tue, 16 Apr 2019) |
| EndedAt: 2019-04-16 03:58:55 -0400 (Tue, 16 Apr 2019) |
| EllapsedTime: 41.5 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: DNAshapeR_1.10.0.tgz |
| PackageFileSize: 1.315 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf DNAshapeR.buildbin-libdir && mkdir DNAshapeR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh DNAshapeR_1.10.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R DNAshapeR.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=DNAshapeR.buildbin-libdir DNAshapeR_1.10.0.tar.gz' >>>>>>> * installing *source* package ‘DNAshapeR’ ... ** libs clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c OptionParser.cpp -o OptionParser.o clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c Output.cpp -o Output.o clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c ReadData.cpp -o ReadData.o clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c SNP.cpp -o SNP.o clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c ShapePrediction.cpp -o ShapePrediction.o clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c TableCompiler.cpp -o TableCompiler.o clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c map.cpp -o map.o clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c prediction.cpp -o prediction.o clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c properties.cpp -o properties.o clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c utilities.cpp -o utilities.o clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o DNAshapeR.so OptionParser.o Output.o RcppExports.o ReadData.o SNP.o ShapePrediction.o TableCompiler.o map.o prediction.o properties.o utilities.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.8-bioc/meat/DNAshapeR.buildbin-libdir/DNAshapeR/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (DNAshapeR) >>>>>>> >>>>>>> FIXING LINKS FOR DNAshapeR.buildbin-libdir/DNAshapeR/libs//DNAshapeR.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgcc_s.1.dylib" "DNAshapeR.buildbin-libdir/DNAshapeR/libs//DNAshapeR.so" install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgfortran.3.dylib" "DNAshapeR.buildbin-libdir/DNAshapeR/libs//DNAshapeR.so" install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.5.2.dylib" "DNAshapeR.buildbin-libdir/DNAshapeR/libs//DNAshapeR.so" install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.dylib" "DNAshapeR.buildbin-libdir/DNAshapeR/libs//DNAshapeR.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libquadmath.0.dylib" "DNAshapeR.buildbin-libdir/DNAshapeR/libs//DNAshapeR.so"