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INSTALL report for basecallQC on tokay2

This page was generated on 2018-10-17 08:43:48 -0400 (Wed, 17 Oct 2018).

Package 92/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
basecallQC 1.4.0
Thomas Carroll
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/basecallQC
Branch: RELEASE_3_7
Last Commit: 91bb781
Last Changed Date: 2018-04-30 10:35:46 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: basecallQC
Version: 1.4.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/basecallQC_1.4.0.tar.gz && rm -rf basecallQC.buildbin-libdir && mkdir basecallQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=basecallQC.buildbin-libdir basecallQC_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL basecallQC_1.4.0.zip && rm basecallQC_1.4.0.tar.gz basecallQC_1.4.0.zip
StartedAt: 2018-10-16 19:52:06 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 19:53:26 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 79.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/basecallQC_1.4.0.tar.gz && rm -rf basecallQC.buildbin-libdir && mkdir basecallQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=basecallQC.buildbin-libdir basecallQC_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL basecallQC_1.4.0.zip && rm basecallQC_1.4.0.tar.gz basecallQC_1.4.0.zip
###
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install for i386

* installing *source* package 'basecallQC' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'basecallQC'
    finding HTML links ... done
    BCL2FastQparams                         html  
    baseCallMetrics                         html  
    basecallQC                              html  
    createBCLcommand                        html  
    createBasemasks                         html  
    demultiplexMetrics                      html  
    demuxBarplot                            html  
    demuxBoxplot                            html  
    indexlengths                            html  
    interOpsReport                          html  
    makeFQTable                             html  
    passFilterBar                           html  
    passFilterBoxplot                       html  
    passFilterTileplot                      html  
    readlengths                             html  
    reportBCL                               html  
    summaryConvStatsTable                   html  
    summaryDemuxTable                       html  
    validateBCLSheet                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'basecallQC' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'basecallQC' as basecallQC_1.4.0.zip
* DONE (basecallQC)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'basecallQC' successfully unpacked and MD5 sums checked
In R CMD INSTALL