Back to Multiple platform build/check report for BioC 3.7
AB[C]DEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for CAFE on tokay2

This page was generated on 2018-10-17 08:38:16 -0400 (Wed, 17 Oct 2018).

Package 177/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CAFE 1.16.0
Sander Bollen
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/CAFE
Branch: RELEASE_3_7
Last Commit: 2bbb237
Last Changed Date: 2018-04-30 10:35:32 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: CAFE
Version: 1.16.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/CAFE_1.16.0.tar.gz && rm -rf CAFE.buildbin-libdir && mkdir CAFE.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CAFE.buildbin-libdir CAFE_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL CAFE_1.16.0.zip && rm CAFE_1.16.0.tar.gz CAFE_1.16.0.zip
StartedAt: 2018-10-16 20:35:36 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 20:37:07 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 91.5 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/CAFE_1.16.0.tar.gz && rm -rf CAFE.buildbin-libdir && mkdir CAFE.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CAFE.buildbin-libdir CAFE_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL CAFE_1.16.0.zip && rm CAFE_1.16.0.tar.gz CAFE_1.16.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 2278k  100 2278k    0     0  27.9M      0 --:--:-- --:--:-- --:--:-- 30.4M

install for i386

* installing *source* package 'CAFE' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CAFE'
    finding HTML links ... done
    CAFE-package                            html  
    CAFE                                    html  
    ProcessCels                             html  
    armStats                                html  
    bandStats                               html  
    chromosomeStats                         html  
    cliSubset                               html  
    discontPlot                             html  
    discontSmooth                           html  
    facetPlot                               html  
    fisher.method                           html  
    guiSubset                               html  
    rawPlot                                 html  
    slidPlot                                html  
    slidSmooth                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'CAFE' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CAFE' as CAFE_1.16.0.zip
* DONE (CAFE)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'CAFE' successfully unpacked and MD5 sums checked
In R CMD INSTALL