Back to Multiple platform build/check report for BioC 3.7
A[B]CDEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for BioQC on merida2

This page was generated on 2018-10-17 08:55:40 -0400 (Wed, 17 Oct 2018).

Package 146/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BioQC 1.8.0
Jitao David Zhang
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/BioQC
Branch: RELEASE_3_7
Last Commit: f043d16
Last Changed Date: 2018-04-30 10:35:39 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: BioQC
Version: 1.8.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL BioQC
StartedAt: 2018-10-16 15:18:41 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 15:19:06 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 24.8 seconds
RetCode: 0
Status:  OK 

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL BioQC
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/3.5/Resources/library’
* installing *source* package ‘BioQC’ ...
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `/Library/Frameworks/R.framework/Resources/bin/Rscript -e 'Rcpp:::CxxFlags()'`  -I/usr/local/include   -fPIC  -Wall -g -O2  -c gini.c -o gini.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `/Library/Frameworks/R.framework/Resources/bin/Rscript -e 'Rcpp:::CxxFlags()'`  -I/usr/local/include   -fPIC  -Wall -g -O2  -c init.c -o init.o
clang++  -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `/Library/Frameworks/R.framework/Resources/bin/Rscript -e 'Rcpp:::CxxFlags()'`  -I/usr/local/include   -fPIC  -Wall -g -O2  -c read_gmt.cpp -o read_gmt.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `/Library/Frameworks/R.framework/Resources/bin/Rscript -e 'Rcpp:::CxxFlags()'`  -I/usr/local/include   -fPIC  -Wall -g -O2  -c stat_rank.c -o stat_rank.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `/Library/Frameworks/R.framework/Resources/bin/Rscript -e 'Rcpp:::CxxFlags()'`  -I/usr/local/include   -fPIC  -Wall -g -O2  -c wmw_test.c -o wmw_test.o
clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o BioQC.so gini.o init.o read_gmt.o stat_rank.o wmw_test.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.5/Resources/library/BioQC/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (BioQC)