Back to Multiple platform build/check report for BioC 3.6 experimental data

CHECK report for tinesath1probe on malbec1

This page was generated on 2018-04-12 12:49:05 -0400 (Thu, 12 Apr 2018).

Package 309/326HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
tinesath1probe 1.16.0
Tine Casneuf
Snapshot Date: 2018-04-12 07:35:06 -0400 (Thu, 12 Apr 2018)
URL: https://git.bioconductor.org/packages/tinesath1probe
Branch: RELEASE_3_6
Last Commit: 899b5d6
Last Changed Date: 2017-10-30 11:58:22 -0400 (Mon, 30 Oct 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded  OK [ WARNINGS ]UNNEEDED, same version exists in internal repository

Summary

Package: tinesath1probe
Version: 1.16.0
Command: /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD check --no-vignettes --timings tinesath1probe_1.16.0.tar.gz
StartedAt: 2018-04-12 10:41:49 -0400 (Thu, 12 Apr 2018)
EndedAt: 2018-04-12 10:42:49 -0400 (Thu, 12 Apr 2018)
EllapsedTime: 60.8 seconds
RetCode: 0
Status:  WARNINGS 
CheckDir: tinesath1probe.Rcheck
Warnings: 1

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD check --no-vignettes --timings tinesath1probe_1.16.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.6-data-experiment/meat/tinesath1probe.Rcheck’
* using R version 3.4.4 (2018-03-15)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘tinesath1probe/DESCRIPTION’ ... OK
* this is package ‘tinesath1probe’ version ‘1.16.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘tinesath1probe’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
                     old_size new_size compress
  tinesath1probe.rda    3.5Mb    2.5Mb       xz
* checking examples ... OK
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING
See
  ‘/home/biocbuild/bbs-3.6-data-experiment/meat/tinesath1probe.Rcheck/00check.log’
for details.



Installation output

tinesath1probe.Rcheck/00install.out

* installing *source* package ‘tinesath1probe’ ...
** data
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (tinesath1probe)

Tests output


Example timings

tinesath1probe.Rcheck/tinesath1probe-Ex.timings

nameusersystemelapsed
tinesath1probe4.2000.1924.395