Henrik Bengtsson
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/aroma.light |
| Branch: RELEASE_3_6 |
| Last Commit: 13ba811 |
| Last Changed Date: 2017-10-30 12:39:17 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:18:21 -0400 (Thu, 12 Apr 2018).
| Package 63/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| aroma.light 3.8.0 Henrik Bengtsson
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: aroma.light |
| Version: 3.8.0 |
| Command: cd aroma.light.buildbin-libdir/aroma.light && zip -r ../../aroma.light_3.8.0.zip . & cd ../.. |
| StartedAt: 2018-04-12 04:23:54 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 04:24:44 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 50.2 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: aroma.light_3.8.0.zip |
| PackageFileSize: 1.153 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd aroma.light.buildbin-libdir/aroma.light && zip -r ../../aroma.light_3.8.0.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: CITATION (332 bytes security) (deflated 80%) adding: data-ex/ (372 bytes security) (stored 0%) adding: data-ex/PMT-RGData.dat (332 bytes security) (deflated 64%) adding: data-ex/TumorBoost,fracB,exampleData.Rbin (332 bytes security) (deflated 0%) adding: DESCRIPTION (332 bytes security) (deflated 44%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 81%) adding: help/aroma.light.rdb (332 bytes security) (deflated 1%) adding: help/aroma.light.rdx (332 bytes security) (stored 0%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 86%) adding: html/1._Calibration_and_Normalization.html (332 bytes security) (deflated 61%) adding: html/aroma.light-package.html (332 bytes security) (deflated 63%) adding: html/averageQuantile.html (332 bytes security) (deflated 62%) adding: html/backtransformAffine.html (332 bytes security) (deflated 68%) adding: html/backtransformPrincipalCurve.html (332 bytes security) (deflated 65%) adding: html/calibrateMultiscan.html (332 bytes security) (deflated 65%) adding: html/callNaiveGenotypes.html (332 bytes security) (deflated 69%) adding: html/distanceBetweenLines.html (332 bytes security) (deflated 66%) adding: html/findPeaksAndValleys.html (332 bytes security) (deflated 66%) adding: html/fitIWPCA.html (332 bytes security) (deflated 67%) adding: html/fitNaiveGenotypes.html (332 bytes security) (deflated 66%) adding: html/fitPrincipalCurve.html (332 bytes security) (deflated 60%) adding: html/fitXYCurve.html (332 bytes security) (deflated 61%) adding: html/iwpca.html (332 bytes security) (deflated 60%) adding: html/likelihood.smooth.spline.html (332 bytes security) (deflated 63%) adding: html/medianPolish.html (332 bytes security) (deflated 64%) adding: html/Non-documented_objects.html (332 bytes security) (deflated 45%) adding: html/normalizeAffine.html (332 bytes security) (deflated 66%) adding: html/normalizeAverage.html (332 bytes security) (deflated 64%) adding: html/normalizeCurveFit.html (332 bytes security) (deflated 66%) adding: html/normalizeDifferencesToAverage.html (332 bytes security) (deflated 58%) adding: html/normalizeFragmentLength.html (332 bytes security) (deflated 70%) adding: html/normalizeQuantileRank.html (332 bytes security) (deflated 63%) adding: html/normalizeQuantileRank.matrix.html (332 bytes security) (deflated 63%) adding: html/normalizeQuantileSpline.html (332 bytes security) (deflated 67%) adding: html/normalizeTumorBoost.html (332 bytes security) (deflated 62%) adding: html/pairedAlleleSpecificCopyNumbers.html (332 bytes security) (deflated 58%) adding: html/plotDensity.html (332 bytes security) (deflated 68%) adding: html/plotMvsA.html (332 bytes security) (deflated 57%) adding: html/plotMvsAPairs.html (332 bytes security) (deflated 56%) adding: html/plotMvsMPairs.html (332 bytes security) (deflated 57%) adding: html/plotXYCurve.html (332 bytes security) (deflated 66%) adding: html/print.SmoothSplineLikelihood.html (332 bytes security) (deflated 54%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/robustSmoothSpline.html (332 bytes security) (deflated 64%) adding: html/sampleCorrelations.html (332 bytes security) (deflated 59%) adding: html/sampleTuples.html (332 bytes security) (deflated 58%) adding: html/wpca.html (332 bytes security) (deflated 63%) adding: INDEX (332 bytes security) (deflated 69%) adding: MD5 (332 bytes security) (deflated 51%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (stored 0%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 76%) adding: NEWS (332 bytes security) (deflated 71%) adding: R/ (372 bytes security) (stored 0%) adding: R/aroma.light (332 bytes security) (deflated 41%) adding: R/aroma.light.rdb (332 bytes security) (deflated 9%) adding: R/aroma.light.rdx (332 bytes security) (stored 0%) adding: rsp/ (372 bytes security) (stored 0%) adding: rsp/.rspPlugins (332 bytes security) (deflated 21%) adding: rsp/AffineNormalization/ (372 bytes security) (stored 0%) adding: rsp/AffineNormalization/AffineNormalization.html.rsp (332 bytes security) (deflated 66%) adding: rsp/bgcorrection.html.rsp (332 bytes security) (deflated 60%) adding: rsp/figures/ (372 bytes security) (stored 0%) adding: rsp/figures/CalibrateMultiscan-GreenChannel-after.png (332 bytes security) (deflated 4%) adding: rsp/figures/CalibrateMultiscan-GreenChannel-before.png (332 bytes security) (deflated 6%) adding: rsp/figures/CalibrateMultiscan-RedChannel-after.png (332 bytes security) (deflated 4%) adding: rsp/figures/CalibrateMultiscan-RedChannel-before.png (332 bytes security) (deflated 6%) adding: rsp/figures/NormalizeAffine-after.png (332 bytes security) (deflated 4%) adding: rsp/figures/NormalizeAffine-before.png (332 bytes security) (deflated 5%) adding: rsp/figures/NormalizeAffine-nonweighted.png (332 bytes security) (deflated 4%) adding: rsp/figures/NormalizeAffine-raw.png (332 bytes security) (deflated 3%) adding: rsp/figures/NormalizeAffine-weighted.png (332 bytes security) (deflated 3%) adding: rsp/figures/NormalizeCurveFit-nonweighted.png (332 bytes security) (deflated 4%) adding: rsp/figures/NormalizeCurveFit-raw.png (332 bytes security) (deflated 3%) adding: rsp/figures/NormalizeCurveFit-weighted.png (332 bytes security) (deflated 3%) adding: rsp/index.html.rsp (332 bytes security) (deflated 58%) adding: rsp/MultiscanCalibration/ (372 bytes security) (stored 0%) adding: rsp/MultiscanCalibration/MultiscanCalibration.html.rsp (332 bytes security) (deflated 59%) adding: rsp/NormalizationWithWeights/ (372 bytes security) (stored 0%) adding: rsp/NormalizationWithWeights/NormalizationWithWeights.html.rsp (332 bytes security) (deflated 70%) adding: rsp/NormalizationWithWeights/TypesOfWeights.html (332 bytes security) (deflated 70%) adding: rsp/preprocessing.html.rsp (332 bytes security) (deflated 60%) adding: rsp/R/ (372 bytes security) (stored 0%) adding: rsp/R/weightedAffineNormalization.Rex (332 bytes security) (deflated 69%) adding: rsp/R/weightedCurveFitNormalization.Rex (332 bytes security) (deflated 69%) adding: rsp/README (332 bytes security) (deflated 30%) adding: rsp/references.html.rsp (332 bytes security) (deflated 58%) adding: rsp/src/ (372 bytes security) (stored 0%) adding: rsp/src/simpleFooter.html.rsp (332 bytes security) (deflated 42%) adding: rsp/src/simpleHead.html.rsp (332 bytes security) (deflated 50%) adding: rsp/src/simpleHeader.html.rsp (332 bytes security) (deflated 50%) adding: rsp/style.css (332 bytes security) (deflated 73%)