CellNOptR 1.23.0
T.Cokelaer
| Snapshot Date: 2017-08-15 17:18:21 -0400 (Tue, 15 Aug 2017) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/CellNOptR | | Last Changed Rev: 129129 / Revision: 131943 | | Last Changed Date: 2017-04-24 15:50:57 -0400 (Mon, 24 Apr 2017) |
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |  |
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
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### Running command:
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### rm -rf CellNOptR.buildbin-libdir && mkdir CellNOptR.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/CellNOptR_1.23.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=CellNOptR.buildbin-libdir --merge-multiarch CellNOptR_1.23.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL CellNOptR_1.23.0.zip && rm CellNOptR_1.23.0.tar.gz CellNOptR_1.23.0.zip
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install for i386
* installing *source* package 'CellNOptR' ...
** libs
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -I./include -O3 -Wall -std=gnu99 -mtune=core2 -c getFit.c -o getFit.o
getFit.c: In function 'getFit':
getFit.c:47:6: warning: unused variable 'nReacs' [-Wunused-variable]
int nReacs = INTEGER(nReacs_in)[0];
^
getFit.c:42:6: warning: unused variable 'selCounter' [-Wunused-variable]
int selCounter = 0;
^
getFit.c:41:6: warning: unused variable 'selection' [-Wunused-variable]
int selection[40];
^
getFit.c:40:6: warning: unused variable 'or_max' [-Wunused-variable]
int or_max = 0;
^
getFit.c:39:6: warning: unused variable 'curr_max' [-Wunused-variable]
int curr_max = 0;
^
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -I./include -O3 -Wall -std=gnu99 -mtune=core2 -c simulatorT1.c -o simulatorT1.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -I./include -O3 -Wall -std=gnu99 -mtune=core2 -c simulatorTN.c -o simulatorTN.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o CellNOptR.dll tmp.def getFit.o simulatorT1.o simulatorTN.o -LC:/local323/lib/i386 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/CellNOptR.buildbin-libdir/CellNOptR/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
install for x64
* installing *source* package 'CellNOptR' ...
** libs
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -I./include -O2 -Wall -std=gnu99 -mtune=core2 -c getFit.c -o getFit.o
getFit.c: In function 'getFit':
getFit.c:47:6: warning: unused variable 'nReacs' [-Wunused-variable]
int nReacs = INTEGER(nReacs_in)[0];
^
getFit.c:42:6: warning: unused variable 'selCounter' [-Wunused-variable]
int selCounter = 0;
^
getFit.c:41:6: warning: unused variable 'selection' [-Wunused-variable]
int selection[40];
^
getFit.c:40:6: warning: unused variable 'or_max' [-Wunused-variable]
int or_max = 0;
^
getFit.c:39:6: warning: unused variable 'curr_max' [-Wunused-variable]
int curr_max = 0;
^
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -I./include -O2 -Wall -std=gnu99 -mtune=core2 -c simulatorT1.c -o simulatorT1.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -I./include -O2 -Wall -std=gnu99 -mtune=core2 -c simulatorTN.c -o simulatorTN.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o CellNOptR.dll tmp.def getFit.o simulatorT1.o simulatorTN.o -LC:/local323/lib/x64 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/CellNOptR.buildbin-libdir/CellNOptR/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CellNOptR' as CellNOptR_1.23.0.zip
* DONE (CellNOptR)
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'CellNOptR' successfully unpacked and MD5 sums checked