Back to the "Build/check report"

BioC experimental data: CHECK report for FlowSorted.CordBloodNorway.450k on malbec2

This page was generated on 2017-10-18 15:09:51 -0400 (Wed, 18 Oct 2017).

Package 106/314HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FlowSorted.CordBloodNorway.450k 1.2.0
kristina gervin
Snapshot Date: 2017-10-18 09:00:07 -0400 (Wed, 18 Oct 2017)
URL: https://git.bioconductor.org/packages/FlowSorted.CordBloodNorway.450k
Branch: RELEASE_3_5
Last Commit: 4668372
Last Changed Date: 2017-08-16 15:15:20 -0400 (Wed, 16 Aug 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded  OK [ OK ]UNNEEDED, same version exists in internal repository

Summary

Package: FlowSorted.CordBloodNorway.450k
Version: 1.2.0
Command: /home/biocbuild/bbs-3.5-bioc/R/bin/R CMD check --no-vignettes --timings FlowSorted.CordBloodNorway.450k_1.2.0.tar.gz
StartedAt: 2017-10-18 10:44:43 -0400 (Wed, 18 Oct 2017)
EndedAt: 2017-10-18 10:50:57 -0400 (Wed, 18 Oct 2017)
EllapsedTime: 374.0 seconds
RetCode: 0
Status:  OK 
CheckDir: FlowSorted.CordBloodNorway.450k.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.5-bioc/R/bin/R CMD check --no-vignettes --timings FlowSorted.CordBloodNorway.450k_1.2.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.5-data-experiment/meat/FlowSorted.CordBloodNorway.450k.Rcheck’
* using R version 3.4.2 (2017-09-28)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘FlowSorted.CordBloodNorway.450k/DESCRIPTION’ ... OK
* this is package ‘FlowSorted.CordBloodNorway.450k’ version ‘1.2.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘FlowSorted.CordBloodNorway.450k’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is 432.6Mb
  sub-directories of 1Mb or more:
    data  432.5Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/home/biocbuild/bbs-3.5-data-experiment/meat/FlowSorted.CordBloodNorway.450k.Rcheck/00check.log’
for details.


FlowSorted.CordBloodNorway.450k.Rcheck/00install.out:

* installing *source* package ‘FlowSorted.CordBloodNorway.450k’ ...
** data
*** moving datasets to lazyload DB
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (FlowSorted.CordBloodNorway.450k)

FlowSorted.CordBloodNorway.450k.Rcheck/FlowSorted.CordBloodNorway.450k-Ex.timings:

nameusersystemelapsed
FlowSorted.CordBloodNorway.450k0.0000.0040.003