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BioC 3.5: INSTALL report for CellNOptR on malbec2

This page was generated on 2017-10-18 14:14:24 -0400 (Wed, 18 Oct 2017).

Package 187/1381HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CellNOptR 1.22.0
T.Cokelaer
Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017)
URL: https://git.bioconductor.org/packages/CellNOptR
Branch: RELEASE_3_5
Last Commit: 90bcfa1
Last Changed Date: 2017-04-24 15:45:44 -0400 (Mon, 24 Apr 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64 [ OK ] OK  ERROR 
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  ERROR  OK 
veracruz2 OS X 10.11.6 El Capitan / x86_64  OK  OK  ERROR  OK 

Summary

Package: CellNOptR
Version: 1.22.0
Command: /home/biocbuild/bbs-3.5-bioc/R/bin/R CMD INSTALL CellNOptR
StartedAt: 2017-10-17 18:07:58 -0400 (Tue, 17 Oct 2017)
EndedAt: 2017-10-17 18:08:06 -0400 (Tue, 17 Oct 2017)
EllapsedTime: 7.6 seconds
RetCode: 0
Status:  OK 

Command output

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###
### Running command:
###
###   /home/biocbuild/bbs-3.5-bioc/R/bin/R CMD INSTALL CellNOptR
###
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* installing to library ‘/home/biocbuild/bbs-3.5-bioc/R/library’
* installing *source* package ‘CellNOptR’ ...
** libs
gcc -I/home/biocbuild/bbs-3.5-bioc/R/include -DNDEBUG   -I/usr/local/include  -I./include  -fpic  -g -O2  -Wall -c getFit.c -o getFit.o
getFit.c: In function ‘getFit’:
getFit.c:47:6: warning: unused variable ‘nReacs’ [-Wunused-variable]
  int nReacs = INTEGER(nReacs_in)[0];
      ^
getFit.c:42:6: warning: unused variable ‘selCounter’ [-Wunused-variable]
  int selCounter = 0;
      ^
getFit.c:41:6: warning: unused variable ‘selection’ [-Wunused-variable]
  int selection[40];
      ^
getFit.c:40:6: warning: unused variable ‘or_max’ [-Wunused-variable]
  int or_max = 0;
      ^
getFit.c:39:6: warning: unused variable ‘curr_max’ [-Wunused-variable]
  int curr_max = 0;
      ^
gcc -I/home/biocbuild/bbs-3.5-bioc/R/include -DNDEBUG   -I/usr/local/include  -I./include  -fpic  -g -O2  -Wall -c simulatorT1.c -o simulatorT1.o
gcc -I/home/biocbuild/bbs-3.5-bioc/R/include -DNDEBUG   -I/usr/local/include  -I./include  -fpic  -g -O2  -Wall -c simulatorTN.c -o simulatorTN.o
gcc -shared -L/home/biocbuild/bbs-3.5-bioc/R/lib -L/usr/local/lib -o CellNOptR.so getFit.o simulatorT1.o simulatorTN.o -L/home/biocbuild/bbs-3.5-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.5-bioc/R/library/CellNOptR/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (CellNOptR)