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BioC 3.2: BUILD BIN report for ChIPpeakAnno on moscato1

This page was generated on 2016-04-23 10:16:58 -0700 (Sat, 23 Apr 2016).

Package 165/1103HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPpeakAnno 3.4.6
Lihua Julie Zhu , Jianhong Ou
Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/ChIPpeakAnno
Last Changed Rev: 113524 / Revision: 116712
Last Changed Date: 2016-02-11 06:19:09 -0800 (Thu, 11 Feb 2016)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: ChIPpeakAnno
Version: 3.4.6
Command: cd ChIPpeakAnno.buildbin-libdir/ChIPpeakAnno && zip -r ../../ChIPpeakAnno_3.4.6.zip . & cd ../..
StartedAt: 2016-04-23 09:23:17 -0700 (Sat, 23 Apr 2016)
EndedAt: 2016-04-23 09:24:28 -0700 (Sat, 23 Apr 2016)
EllapsedTime: 71.4 seconds
RetCode: 0
Status:  OK  
PackageFile: ChIPpeakAnno_3.4.6.zip
PackageFileSize: 31.46 MiB

Command output

##############################################################################
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###
### Running command:
###
###   cd ChIPpeakAnno.buildbin-libdir/ChIPpeakAnno && zip -r ../../ChIPpeakAnno_3.4.6.zip . & cd ../..
###
##############################################################################
##############################################################################


Scanning files 
  adding: CITATION (188 bytes security) (deflated 58%)
  adding: data/ (208 bytes security) (stored 0%)
  adding: data/annotatedPeak.rda (188 bytes security) (deflated 0%)
  adding: data/datalist (188 bytes security) (deflated 45%)
  adding: data/enrichedGO.rda (188 bytes security) (stored 0%)
  adding: data/ExonPlusUtr.human.GRCh37.rda (188 bytes security) (deflated 0%)
  adding: data/HOT.spots.rda (188 bytes security) (deflated 0%)
  adding: data/myPeakList.rda (188 bytes security) (deflated 0%)
  adding: data/Peaks.Ste12.Replicate1.rda (188 bytes security) (stored 0%)
  adding: data/Peaks.Ste12.Replicate2.rda (188 bytes security) (stored 0%)
  adding: data/Peaks.Ste12.Replicate3.rda (188 bytes security) (stored 0%)
  adding: data/TSS.human.GRCh37.rda (188 bytes security) (deflated 0%)
  adding: data/TSS.human.GRCh38.rda (188 bytes security) (deflated 0%)
  adding: data/TSS.human.NCBI36.rda (188 bytes security) (deflated 0%)
  adding: data/TSS.mouse.GRCm38.rda (188 bytes security) (deflated 0%)
  adding: data/TSS.mouse.NCBIM37.rda (188 bytes security) (deflated 0%)
  adding: data/TSS.rat.RGSC3.4.rda (188 bytes security) (deflated 0%)
  adding: data/TSS.rat.Rnor_5.0.rda (188 bytes security) (deflated 0%)
  adding: data/TSS.zebrafish.Zv8.rda (188 bytes security) (deflated 0%)
  adding: data/TSS.zebrafish.Zv9.rda (188 bytes security) (deflated 0%)
  adding: data/wgEncodeTfbsV3.rda (188 bytes security) (deflated 0%)
  adding: DESCRIPTION (188 bytes security) (deflated 48%)
  adding: doc/ (208 bytes security) (stored 0%)
  adding: doc/ChIPpeakAnno.html (188 bytes security) (deflated 50%)
  adding: doc/ChIPpeakAnno.Rmd (188 bytes security) (deflated 70%)
  adding: doc/index.html (188 bytes security) (deflated 59%)
  adding: extdata/ (208 bytes security) (stored 0%)
  adding: extdata/annotatedPeaks.2.10.0.rds (188 bytes security) (deflated 1%)
  adding: extdata/examplePattern.fa (188 bytes security) (deflated 24%)
  adding: extdata/gadem.rda (188 bytes security) (deflated 4%)
  adding: extdata/GFF_peaks.gff (188 bytes security) (deflated 76%)
  adding: extdata/GSM700906_AA86_vs_INPUT_WS170.bed (188 bytes security) (deflated 62%)
  adding: extdata/GSM700907_DAF-12_TAP_vs_INPUT_#1_WS170.bed (188 bytes security) (deflated 63%)
  adding: extdata/GSM700908_DAF-12_TAP_vs_INPUT_#2_WS170.bed (188 bytes security) (deflated 63%)
  adding: extdata/GSM700909_DAF-12_TAP_vs_INPUT_#3_WS170.bed (188 bytes security) (deflated 63%)
  adding: extdata/guide-seq-peaks.txt (188 bytes security) (deflated 78%)
  adding: extdata/MACS2_peaks.xls (188 bytes security) (deflated 69%)
  adding: extdata/MACS_output.bed (188 bytes security) (deflated 65%)
  adding: extdata/MACS_peaks.xls (188 bytes security) (deflated 48%)
  adding: extdata/peaks.narrowPeak (188 bytes security) (deflated 66%)
  adding: extdata/peaks_hg19.bed (188 bytes security) (deflated 63%)
  adding: extdata/ref.gtf (188 bytes security) (deflated 33%)
  adding: extdata/TAF.bigWig (188 bytes security) (deflated 32%)
  adding: extdata/TAF.broadPeak (188 bytes security) (deflated 65%)
  adding: extdata/Tead4.bigWig (188 bytes security) (deflated 44%)
  adding: extdata/Tead4.broadPeak (188 bytes security) (deflated 66%)
  adding: extdata/test.bed (188 bytes security) (deflated 12%)
  adding: extdata/WS220.bed (188 bytes security) (deflated 76%)
  adding: extdata/YY1.bigWig (188 bytes security) (deflated 32%)
  adding: extdata/YY1.broadPeak (188 bytes security) (deflated 66%)
  adding: help/ (208 bytes security) (stored 0%)
  adding: help/aliases.rds (188 bytes security) (stored 0%)
  adding: help/AnIndex (188 bytes security) (deflated 69%)
  adding: help/ChIPpeakAnno.rdb (188 bytes security) (deflated 1%)
  adding: help/ChIPpeakAnno.rdx (188 bytes security) (stored 0%)
  adding: help/paths.rds (188 bytes security) (stored 0%)
  adding: html/ (208 bytes security) (stored 0%)
  adding: html/00Index.html (188 bytes security) (deflated 78%)
  adding: html/R.css (188 bytes security) (deflated 75%)
  adding: INDEX (188 bytes security) (deflated 69%)
  adding: MD5 (188 bytes security) (deflated 48%)
  adding: Meta/ (208 bytes security) (stored 0%)
  adding: Meta/data.rds (188 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (188 bytes security) (deflated 1%)
  adding: Meta/links.rds (188 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (188 bytes security) (stored 0%)
  adding: Meta/package.rds (188 bytes security) (stored 0%)
  adding: Meta/Rd.rds (188 bytes security) (stored 0%)
  adding: Meta/vignette.rds (188 bytes security) (stored 0%)
  adding: NAMESPACE (188 bytes security) (deflated 58%)
  adding: NEWS (188 bytes security) (deflated 68%)
  adding: R/ (208 bytes security) (stored 0%)
  adding: R/ChIPpeakAnno (188 bytes security) (deflated 41%)
  adding: R/ChIPpeakAnno.rdb (188 bytes security) (deflated 8%)
  adding: R/ChIPpeakAnno.rdx (188 bytes security) (stored 0%)
  adding: unitTests/ (208 bytes security) (stored 0%)
  adding: unitTests/test_addGeneIDs.R (188 bytes security) (deflated 37%)
  adding: unitTests/test_annotatePeakInBatch.R (188 bytes security) (deflated 84%)
  adding: unitTests/test_assignChromosomeRegion.R (188 bytes security) (deflated 71%)
  adding: unitTests/test_binOverFeature.R (188 bytes security) (deflated 72%)
  adding: unitTests/test_feature.R (188 bytes security) (deflated 70%)
  adding: unitTests/test_findOverlapsOfPeaks.R (188 bytes security) (deflated 74%)
  adding: unitTests/test_getAllPeakSequence.R (188 bytes security) (deflated 72%)
  adding: unitTests/test_getAnnotation.R (188 bytes security) (deflated 31%)
  adding: unitTests/test_getVennCounts.R (188 bytes security) (deflated 78%)
  adding: unitTests/test_makeVennDiagram.R (188 bytes security) (deflated 89%)
  adding: unitTests/test_peaksNearBDP.R (188 bytes security) (deflated 69%)
  adding: unitTests/test_toGRanges.R (188 bytes security) (deflated 67%)
  adding: unitTests/test_write2FASTA.R (188 bytes security) (deflated 61%)