Back to Multiple platform build/check report for BioC 3.19: simplified long |
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This page was generated on 2024-05-04 11:40:36 -0400 (Sat, 04 May 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" | 4753 |
palomino3 | Windows Server 2022 Datacenter | x64 | 4.4.0 beta (2024-04-15 r86425 ucrt) -- "Puppy Cup" | 4486 |
lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.0 beta (2024-04-14 r86421) -- "Puppy Cup" | 4519 |
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" | 4479 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 908/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
graper 1.20.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | ![]() | ||||||||
palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | ![]() | ||||||||
lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | ![]() | ||||||||
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
kjohnson3 | macOS 13.6.5 Ventura / arm64 | see weekly results here | ||||||||||||
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
Package: graper |
Version: 1.20.0 |
Command: /home/biocbuild/R/R-beta-2024-04-15_r86425/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library --no-vignettes --timings graper_1.20.0.tar.gz |
StartedAt: 2024-05-04 08:10:31 -0000 (Sat, 04 May 2024) |
EndedAt: 2024-05-04 08:11:39 -0000 (Sat, 04 May 2024) |
EllapsedTime: 68.1 seconds |
RetCode: 0 |
Status: OK |
CheckDir: graper.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R-beta-2024-04-15_r86425/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library --no-vignettes --timings graper_1.20.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck’ * using R version 4.4.0 beta (2024-04-15 r86425) * using platform: aarch64-unknown-linux-gnu * R was compiled by gcc (GCC) 10.3.1 GNU Fortran (GCC) 10.3.1 * running under: openEuler 22.03 (LTS-SP1) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘graper/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘graper’ version ‘1.20.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘graper’ can be installed ... OK * used C++ compiler: ‘g++ (GCC) 10.3.1’ * checking C++ specification ... NOTE Specified C++11: please drop specification unless essential * checking installed package size ... NOTE installed size is 7.7Mb sub-directories of 1Mb or more: libs 7.5Mb * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... NOTE checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ? checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ? checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ? * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking compiled code ... NOTE Note: information on .o files is not available * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 4 NOTEs See ‘/home/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00check.log’ for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R-beta-2024-04-15_r86425/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library’ * installing *source* package ‘graper’ ... ** using staged installation ** libs using C++ compiler: ‘g++ (GCC) 10.3.1’ using C++11 g++ -std=gnu++11 -I"/home/biocbuild/R/R-beta-2024-04-15_r86425/include" -DNDEBUG -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/Rcpp/include' -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/RcppArmadillo/include' -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++11 -I"/home/biocbuild/R/R-beta-2024-04-15_r86425/include" -DNDEBUG -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/Rcpp/include' -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/RcppArmadillo/include' -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -c fit_graper.cpp -o fit_graper.o In file included from /home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11, from /home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include/boost/math/special_functions/math_fwd.hpp:29, from /home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include/boost/math/special_functions/digamma.hpp:15, from graper_linear_dense_ff.h:2, from fit_graper.cpp:4: /home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -std=gnu++11 -shared -L/home/biocbuild/R/R-beta-2024-04-15_r86425/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -lopenblas -lgfortran -lm -L/home/biocbuild/R/R-beta-2024-04-15_r86425/lib -lR installing to /home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: aarch64-unknown-linux-gnu R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(graper) > > test_check("graper") iteration 1 Updating parameters of variational distributions... Calculating ELB.. ELB=-877.21 ELB improved by inf iteration 2 Updating parameters of variational distributions... Calculating ELB.. ELB=-611.795 ELB improved by 265.415 iteration 3 Updating parameters of variational distributions... Calculating ELB.. ELB=-554.688 ELB improved by 57.1063 iteration 4 Updating parameters of variational distributions... Calculating ELB.. ELB=-506.129 ELB improved by 48.5595 iteration 5 Updating parameters of variational distributions... Calculating ELB.. ELB=-480.419 ELB improved by 25.7103 iteration 6 Updating parameters of variational distributions... Calculating ELB.. ELB=-470.04 ELB improved by 10.3783 iteration 7 Updating parameters of variational distributions... Calculating ELB.. ELB=-463.802 ELB improved by 6.23807 iteration 8 Updating parameters of variational distributions... Calculating ELB.. ELB=-458.113 ELB improved by 5.68933 iteration 9 Updating parameters of variational distributions... Calculating ELB.. ELB=-452.348 ELB improved by 5.76447 iteration 10 Updating parameters of variational distributions... Calculating ELB.. ELB=-446.776 ELB improved by 5.57227 iteration 11 Updating parameters of variational distributions... Calculating ELB.. ELB=-441.962 ELB improved by 4.81427 iteration 12 Updating parameters of variational distributions... Calculating ELB.. ELB=-438.292 ELB improved by 3.67012 iteration 13 Updating parameters of variational distributions... Calculating ELB.. ELB=-435.731 ELB improved by 2.56028 iteration 14 Updating parameters of variational distributions... Calculating ELB.. ELB=-433.991 ELB improved by 1.73992 iteration 15 Updating parameters of variational distributions... Calculating ELB.. ELB=-432.765 ELB improved by 1.22608 iteration 16 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.831 ELB improved by 0.93425 iteration 17 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.047 ELB improved by 0.783978 iteration 18 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.32 ELB improved by 0.727584 iteration 19 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.574 ELB improved by 0.7459 iteration 20 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.739 ELB improved by 0.834817 iteration 21 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.811 ELB improved by 0.927531 iteration 22 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.943 ELB improved by 0.868716 iteration 23 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.239 ELB improved by 0.70334 iteration 24 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.664 ELB improved by 0.574798 iteration 25 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.162 ELB improved by 0.50298 iteration 26 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.699 ELB improved by 0.462255 iteration 27 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.271 ELB improved by 0.428735 iteration 28 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.878 ELB improved by 0.392094 iteration 29 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.522 ELB improved by 0.35594 iteration 30 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.196 ELB improved by 0.326218 iteration 31 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.892 ELB improved by 0.303883 iteration 32 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.605 ELB improved by 0.286969 iteration 33 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.332 ELB improved by 0.273525 iteration 34 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.069 ELB improved by 0.262395 iteration 35 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.816 ELB improved by 0.253017 iteration 36 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.571 ELB improved by 0.245129 iteration 37 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.333 ELB improved by 0.238568 iteration 38 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.1 ELB improved by 0.233179 iteration 39 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.871 ELB improved by 0.228765 iteration 40 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.646 ELB improved by 0.225062 iteration 41 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.424 ELB improved by 0.221736 iteration 42 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.206 ELB improved by 0.218386 iteration 43 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.991 ELB improved by 0.214558 iteration 44 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.781 ELB improved by 0.209791 iteration 45 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.578 ELB improved by 0.203664 iteration 46 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.382 ELB improved by 0.195868 iteration 47 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.196 ELB improved by 0.186264 iteration 48 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.021 ELB improved by 0.174929 iteration 49 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.858 ELB improved by 0.162159 iteration 50 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.71 ELB improved by 0.148424 iteration 51 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.576 ELB improved by 0.134296 iteration 52 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.455 ELB improved by 0.120358 iteration 53 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.348 ELB improved by 0.107123 iteration 54 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.253 ELB improved by 0.0949811 iteration 55 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.169 ELB improved by 0.0841804 iteration 56 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.094 ELB improved by 0.0748331 iteration 57 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.027 ELB improved by 0.0669407 iteration 58 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.967 ELB improved by 0.0604241 iteration 59 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.912 ELB improved by 0.0551528 iteration 60 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.861 ELB improved by 0.0509742 iteration 61 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.813 ELB improved by 0.0477428 iteration 62 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.768 ELB improved by 0.045359 iteration 63 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.724 ELB improved by 0.0438227 iteration 64 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.68 ELB improved by 0.0433138 iteration 65 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.636 ELB improved by 0.0443295 iteration 66 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.588 ELB improved by 0.0479354 iteration 67 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.532 ELB improved by 0.0562208 iteration 68 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.459 ELB improved by 0.0728983 iteration 69 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.356 ELB improved by 0.102922 iteration 70 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.209 ELB improved by 0.146987 iteration 71 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.02 ELB improved by 0.188989 iteration 72 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.82 ELB improved by 0.200162 iteration 73 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.645 ELB improved by 0.174579 iteration 74 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.511 ELB improved by 0.13449 iteration 75 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.41 ELB improved by 0.10117 iteration 76 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.327 ELB improved by 0.0831336 iteration 77 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.245 ELB improved by 0.0812812 iteration 78 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.15 ELB improved by 0.0949218 iteration 79 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.029 ELB improved by 0.121015 iteration 80 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.884 ELB improved by 0.145352 iteration 81 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.739 ELB improved by 0.144874 iteration 82 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.62 ELB improved by 0.119236 iteration 83 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.528 ELB improved by 0.0915588 iteration 84 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.454 ELB improved by 0.0747852 iteration 85 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.385 ELB improved by 0.0687025 iteration 86 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.314 ELB improved by 0.0705978 iteration 87 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.235 ELB improved by 0.0791063 iteration 88 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.141 ELB improved by 0.0941051 iteration 89 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.026 ELB improved by 0.115585 iteration 90 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.884 ELB improved by 0.14191 iteration 91 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.716 ELB improved by 0.168142 iteration 92 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.526 ELB improved by 0.189531 iteration 93 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.312 ELB improved by 0.214336 iteration 94 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.054 ELB improved by 0.257638 iteration 95 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.776 ELB improved by 0.278409 iteration 96 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.563 ELB improved by 0.21287 iteration 97 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.442 ELB improved by 0.120761 iteration 98 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.379 ELB improved by 0.0627895 iteration 99 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.345 ELB improved by 0.0346015 iteration 100 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.323 ELB improved by 0.0213076 iteration 101 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.309 ELB improved by 0.0146726 iteration 102 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.298 ELB improved by 0.0110772 iteration 103 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.289 ELB improved by 0.00895874 ELB converged iteration 1 Updating parameters of variational distributions... Calculating ELB.. ELB=-872.047 ELB improved by inf iteration 2 Updating parameters of variational distributions... Calculating ELB.. ELB=-556.994 ELB improved by 315.053 iteration 3 Updating parameters of variational distributions... Calculating ELB.. ELB=-499.871 ELB improved by 57.1228 iteration 4 Updating parameters of variational distributions... Calculating ELB.. ELB=-470.92 ELB improved by 28.9518 iteration 5 Updating parameters of variational distributions... Calculating ELB.. ELB=-460.191 ELB improved by 10.7287 iteration 6 Updating parameters of variational distributions... Calculating ELB.. ELB=-454.988 ELB improved by 5.20289 iteration 7 Updating parameters of variational distributions... Calculating ELB.. ELB=-451.092 ELB improved by 3.89653 iteration 8 Updating parameters of variational distributions... Calculating ELB.. ELB=-447.241 ELB improved by 3.85071 iteration 9 Updating parameters of variational distributions... Calculating ELB.. ELB=-442.991 ELB improved by 4.24957 iteration 10 Updating parameters of variational distributions... Calculating ELB.. ELB=-438.232 ELB improved by 4.75951 iteration 11 Updating parameters of variational distributions... Calculating ELB.. ELB=-433.223 ELB improved by 5.00916 iteration 12 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.627 ELB improved by 4.59542 iteration 13 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.104 ELB improved by 3.52321 iteration 14 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.781 ELB improved by 2.32283 iteration 15 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.331 ELB improved by 1.44968 iteration 16 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.389 ELB improved by 0.942385 iteration 17 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.725 ELB improved by 0.663757 iteration 18 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.219 ELB improved by 0.506177 iteration 19 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.807 ELB improved by 0.412604 iteration 20 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.452 ELB improved by 0.354262 iteration 21 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.136 ELB improved by 0.316281 iteration 22 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.845 ELB improved by 0.290741 iteration 23 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.572 ELB improved by 0.273237 iteration 24 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.311 ELB improved by 0.26117 iteration 25 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.058 ELB improved by 0.252891 iteration 26 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.811 ELB improved by 0.247253 iteration 27 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.567 ELB improved by 0.243354 iteration 28 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.327 ELB improved by 0.240367 iteration 29 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.089 ELB improved by 0.237457 iteration 30 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.856 ELB improved by 0.233816 iteration 31 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.627 ELB improved by 0.228812 iteration 32 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.405 ELB improved by 0.222152 iteration 33 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.191 ELB improved by 0.213899 iteration 34 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.986 ELB improved by 0.204346 iteration 35 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.793 ELB improved by 0.193862 iteration 36 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.61 ELB improved by 0.18281 iteration 37 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.438 ELB improved by 0.171509 iteration 38 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.278 ELB improved by 0.160228 iteration 39 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.129 ELB improved by 0.14918 iteration 40 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.99 ELB improved by 0.138524 iteration 41 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.862 ELB improved by 0.12837 iteration 42 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.743 ELB improved by 0.118781 iteration 43 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.633 ELB improved by 0.10979 iteration 44 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.532 ELB improved by 0.1014 iteration 45 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.438 ELB improved by 0.0935988 iteration 46 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.352 ELB improved by 0.0863605 iteration 47 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.272 ELB improved by 0.0796544 iteration 48 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.199 ELB improved by 0.0734469 iteration 49 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.131 ELB improved by 0.067704 iteration 50 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.069 ELB improved by 0.0623931 iteration 51 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.011 ELB improved by 0.0574834 iteration 52 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.958 ELB improved by 0.0529467 iteration 53 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.91 ELB improved by 0.0487569 iteration 54 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.865 ELB improved by 0.0448899 iteration 55 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.823 ELB improved by 0.0413237 iteration 56 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.785 ELB improved by 0.0380377 iteration 57 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.75 ELB improved by 0.0350128 iteration 58 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.718 ELB improved by 0.0322309 iteration 59 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.689 ELB improved by 0.029675 iteration 60 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.661 ELB improved by 0.027329 iteration 61 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.636 ELB improved by 0.0251777 iteration 62 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.613 ELB improved by 0.0232064 iteration 63 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.591 ELB improved by 0.0214015 iteration 64 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.572 ELB improved by 0.0197501 iteration 65 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.553 ELB improved by 0.0182399 iteration 66 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.537 ELB improved by 0.0168594 iteration 67 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.521 ELB improved by 0.0155978 iteration 68 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.506 ELB improved by 0.0144453 iteration 69 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.493 ELB improved by 0.0133924 iteration 70 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.481 ELB improved by 0.0124306 iteration 71 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.469 ELB improved by 0.0115519 iteration 72 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.458 ELB improved by 0.0107489 iteration 73 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.448 ELB improved by 0.010015 iteration 74 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.439 ELB improved by 0.00934399 ELB converged iteration 1 Updating parameters of variational distributions... Calculating ELB.. ELB=-859.091 ELB improved by inf iteration 2 Updating parameters of variational distributions... Calculating ELB.. ELB=-596.434 ELB improved by 262.657 iteration 3 Updating parameters of variational distributions... Calculating ELB.. ELB=-534.985 ELB improved by 61.4496 iteration 4 Updating parameters of variational distributions... Calculating ELB.. ELB=-493.199 ELB improved by 41.7855 iteration 5 Updating parameters of variational distributions... Calculating ELB.. ELB=-472.763 ELB improved by 20.4359 iteration 6 Updating parameters of variational distributions... Calculating ELB.. ELB=-463.261 ELB improved by 9.50258 iteration 7 Updating parameters of variational distributions... Calculating ELB.. ELB=-457.199 ELB improved by 6.06193 iteration 8 Updating parameters of variational distributions... Calculating ELB.. ELB=-451.661 ELB improved by 5.53761 iteration 9 Updating parameters of variational distributions... Calculating ELB.. ELB=-445.641 ELB improved by 6.01975 iteration 10 Updating parameters of variational distributions... Calculating ELB.. ELB=-438.891 ELB improved by 6.75044 iteration 11 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.911 ELB improved by 6.98024 iteration 12 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.86 ELB improved by 6.05086 iteration 13 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.462 ELB improved by 4.39758 iteration 14 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.447 ELB improved by 3.01541 iteration 15 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.282 ELB improved by 2.16499 iteration 16 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.633 ELB improved by 1.64878 iteration 17 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.331 ELB improved by 1.30215 iteration 18 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.333 ELB improved by 0.997842 iteration 19 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.604 ELB improved by 0.729274 iteration 20 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.063 ELB improved by 0.5411 iteration 21 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.641 ELB improved by 0.422159 iteration 22 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.296 ELB improved by 0.344653 iteration 23 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.005 ELB improved by 0.290959 iteration 24 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.753 ELB improved by 0.251928 iteration 25 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.53 ELB improved by 0.222641 iteration 26 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.33 ELB improved by 0.200193 iteration 27 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.147 ELB improved by 0.18272 iteration 28 Updating parameters of variational distributions... Calculating ELB.. ELB=-408.979 ELB improved by 0.168943 iteration 29 Updating parameters of variational distributions... Calculating ELB.. ELB=-408.821 ELB improved by 0.157945 iteration 30 Updating parameters of variational distributions... Calculating ELB.. ELB=-408.672 ELB improved by 0.149044 iteration 31 Updating parameters of variational distributions... Calculating ELB.. ELB=-408.53 ELB improved by 0.141721 iteration 32 Updating parameters of variational distributions... Calculating ELB.. ELB=-408.394 ELB improved by 0.135568 iteration 33 Updating parameters of variational distributions... Calculating ELB.. ELB=-408.264 ELB improved by 0.130267 iteration 34 Updating parameters of variational distributions... Calculating ELB.. ELB=-408.138 ELB improved by 0.125559 iteration 35 Updating parameters of variational distributions... Calculating ELB.. ELB=-408.017 ELB improved by 0.121237 iteration 36 Updating parameters of variational distributions... Calculating ELB.. ELB=-407.9 ELB improved by 0.117137 iteration 37 Updating parameters of variational distributions... Calculating ELB.. ELB=-407.787 ELB improved by 0.11313 iteration 38 Updating parameters of variational distributions... Calculating ELB.. ELB=-407.678 ELB improved by 0.109122 iteration 39 Updating parameters of variational distributions... Calculating ELB.. ELB=-407.573 ELB improved by 0.105049 iteration 40 Updating parameters of variational distributions... Calculating ELB.. ELB=-407.472 ELB improved by 0.100877 iteration 41 Updating parameters of variational distributions... Calculating ELB.. ELB=-407.375 ELB improved by 0.0965968 iteration 42 Updating parameters of variational distributions... Calculating ELB.. ELB=-407.283 ELB improved by 0.0922234 iteration 43 Updating parameters of variational distributions... Calculating ELB.. ELB=-407.195 ELB improved by 0.087788 iteration 44 Updating parameters of variational distributions... Calculating ELB.. ELB=-407.112 ELB improved by 0.0833337 iteration 45 Updating parameters of variational distributions... Calculating ELB.. ELB=-407.033 ELB improved by 0.0789086 iteration 46 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.958 ELB improved by 0.0745607 iteration 47 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.888 ELB improved by 0.0703338 iteration 48 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.822 ELB improved by 0.0662643 iteration 49 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.76 ELB improved by 0.06238 iteration 50 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.701 ELB improved by 0.0586997 iteration 51 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.646 ELB improved by 0.0552341 iteration 52 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.594 ELB improved by 0.0519867 iteration 53 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.545 ELB improved by 0.0489554 iteration 54 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.498 ELB improved by 0.046134 iteration 55 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.455 ELB improved by 0.0435133 iteration 56 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.414 ELB improved by 0.0410823 iteration 57 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.375 ELB improved by 0.038829 iteration 58 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.338 ELB improved by 0.0367411 iteration 59 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.304 ELB improved by 0.0348065 iteration 60 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.271 ELB improved by 0.0330137 iteration 61 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.239 ELB improved by 0.0313515 iteration 62 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.209 ELB improved by 0.0298098 iteration 63 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.181 ELB improved by 0.0283793 iteration 64 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.154 ELB improved by 0.0270513 iteration 65 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.128 ELB improved by 0.0258181 iteration 66 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.103 ELB improved by 0.0246726 iteration 67 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.08 ELB improved by 0.0236083 iteration 68 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.057 ELB improved by 0.0226197 iteration 69 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.035 ELB improved by 0.0217015 iteration 70 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.015 ELB improved by 0.0208491 iteration 71 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.995 ELB improved by 0.0200584 iteration 72 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.975 ELB improved by 0.0193257 iteration 73 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.957 ELB improved by 0.018648 iteration 74 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.939 ELB improved by 0.0180225 iteration 75 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.921 ELB improved by 0.0174469 iteration 76 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.904 ELB improved by 0.0169196 iteration 77 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.888 ELB improved by 0.0164395 iteration 78 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.872 ELB improved by 0.0160061 iteration 79 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.856 ELB improved by 0.0156197 iteration 80 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.841 ELB improved by 0.0152817 iteration 81 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.826 ELB improved by 0.0149949 iteration 82 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.811 ELB improved by 0.014764 iteration 83 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.797 ELB improved by 0.0145961 iteration 84 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.782 ELB improved by 0.0145022 iteration 85 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.768 ELB improved by 0.0144988 iteration 86 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.753 ELB improved by 0.0146109 iteration 87 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.738 ELB improved by 0.0148769 iteration 88 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.723 ELB improved by 0.015357 iteration 89 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.707 ELB improved by 0.0161483 iteration 90 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.689 ELB improved by 0.0174116 iteration 91 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.67 ELB improved by 0.0194212 iteration 92 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.647 ELB improved by 0.0226568 iteration 93 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.619 ELB improved by 0.0279644 iteration 94 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.582 ELB improved by 0.0367968 iteration 95 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.531 ELB improved by 0.0513699 iteration 96 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.457 ELB improved by 0.0739811 iteration 97 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.353 ELB improved by 0.104094 iteration 98 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.218 ELB improved by 0.135308 iteration 99 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.055 ELB improved by 0.162681 iteration 100 Updating parameters of variational distributions... Calculating ELB.. ELB=-404.856 ELB improved by 0.198607 iteration 101 Updating parameters of variational distributions... Calculating ELB.. ELB=-404.578 ELB improved by 0.27825 iteration 102 Updating parameters of variational distributions... Calculating ELB.. ELB=-404.125 ELB improved by 0.452581 iteration 103 Updating parameters of variational distributions... Calculating ELB.. ELB=-403.449 ELB improved by 0.676418 iteration 104 Updating parameters of variational distributions... Calculating ELB.. ELB=-402.736 ELB improved by 0.713399 iteration 105 Updating parameters of variational distributions... Calculating ELB.. ELB=-402.138 ELB improved by 0.597927 iteration 106 Updating parameters of variational distributions... Calculating ELB.. ELB=-401.649 ELB improved by 0.488501 iteration 107 Updating parameters of variational distributions... Calculating ELB.. ELB=-401.243 ELB improved by 0.406612 iteration 108 Updating parameters of variational distributions... Calculating ELB.. ELB=-400.903 ELB improved by 0.339323 iteration 109 Updating parameters of variational distributions... Calculating ELB.. ELB=-400.627 ELB improved by 0.276705 iteration 110 Updating parameters of variational distributions... Calculating ELB.. ELB=-400.408 ELB improved by 0.218168 iteration 111 Updating parameters of variational distributions... Calculating ELB.. ELB=-400.241 ELB improved by 0.167769 iteration 112 Updating parameters of variational distributions... Calculating ELB.. ELB=-400.113 ELB improved by 0.127254 iteration 113 Updating parameters of variational distributions... Calculating ELB.. ELB=-400.018 ELB improved by 0.0956094 iteration 114 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.946 ELB improved by 0.0712749 iteration 115 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.893 ELB improved by 0.0530804 iteration 116 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.853 ELB improved by 0.040084 iteration 117 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.822 ELB improved by 0.0313374 iteration 118 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.796 ELB improved by 0.0258989 iteration 119 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.773 ELB improved by 0.0229411 iteration 120 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.751 ELB improved by 0.0217876 iteration 121 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.729 ELB improved by 0.0218396 iteration 122 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.707 ELB improved by 0.0224409 iteration 123 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.684 ELB improved by 0.022793 iteration 124 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.662 ELB improved by 0.0220925 iteration 125 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.642 ELB improved by 0.0199365 iteration 126 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.626 ELB improved by 0.01665 iteration 127 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.612 ELB improved by 0.0130719 iteration 128 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.603 ELB improved by 0.00995275 ELB converged iteration 1 Updating parameters of variational distributions... Calculating ELB.. ELB=-883.57 ELB improved by inf iteration 2 Updating parameters of variational distributions... Calculating ELB.. ELB=-577.357 ELB improved by 306.213 iteration 3 Updating parameters of variational distributions... Calculating ELB.. ELB=-518.81 ELB improved by 58.5468 iteration 4 Updating parameters of variational distributions... Calculating ELB.. ELB=-481.949 ELB improved by 36.8607 iteration 5 Updating parameters of variational distributions... Calculating ELB.. ELB=-466.321 ELB improved by 15.628 iteration 6 Updating parameters of variational distributions... Calculating ELB.. ELB=-458.951 ELB improved by 7.37078 iteration 7 Updating parameters of variational distributions... Calculating ELB.. ELB=-454.035 ELB improved by 4.91558 iteration 8 Updating parameters of variational distributions... Calculating ELB.. ELB=-449.863 ELB improved by 4.17233 iteration 9 Updating parameters of variational distributions... Calculating ELB.. ELB=-445.929 ELB improved by 3.93325 iteration 10 Updating parameters of variational distributions... Calculating ELB.. ELB=-442.145 ELB improved by 3.78433 iteration 11 Updating parameters of variational distributions... Calculating ELB.. ELB=-438.586 ELB improved by 3.55923 iteration 12 Updating parameters of variational distributions... Calculating ELB.. ELB=-435.353 ELB improved by 3.23293 iteration 13 Updating parameters of variational distributions... Calculating ELB.. ELB=-432.534 ELB improved by 2.81878 iteration 14 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.227 ELB improved by 2.30679 iteration 15 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.457 ELB improved by 1.7704 iteration 16 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.137 ELB improved by 1.32 iteration 17 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.147 ELB improved by 0.990181 iteration 18 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.388 ELB improved by 0.758978 iteration 19 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.796 ELB improved by 0.591526 iteration 20 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.33 ELB improved by 0.466002 iteration 21 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.956 ELB improved by 0.37445 iteration 22 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.645 ELB improved by 0.310615 iteration 23 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.378 ELB improved by 0.266857 iteration 24 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.142 ELB improved by 0.2367 iteration 25 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.926 ELB improved by 0.215826 iteration 26 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.724 ELB improved by 0.201636 iteration 27 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.532 ELB improved by 0.192619 iteration 28 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.344 ELB improved by 0.187915 iteration 29 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.157 ELB improved by 0.18707 iteration 30 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.967 ELB improved by 0.189892 iteration 31 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.77 ELB improved by 0.196383 iteration 32 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.564 ELB improved by 0.206703 iteration 33 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.342 ELB improved by 0.22115 iteration 34 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.102 ELB improved by 0.240159 iteration 35 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.838 ELB improved by 0.264294 iteration 36 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.544 ELB improved by 0.294248 iteration 37 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.213 ELB improved by 0.330821 iteration 38 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.838 ELB improved by 0.37486 iteration 39 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.411 ELB improved by 0.427097 iteration 40 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.923 ELB improved by 0.487806 iteration 41 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.367 ELB improved by 0.556175 iteration 42 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.738 ELB improved by 0.62939 iteration 43 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.036 ELB improved by 0.701782 iteration 44 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.271 ELB improved by 0.764762 iteration 45 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.463 ELB improved by 0.807999 iteration 46 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.642 ELB improved by 0.821007 iteration 47 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.848 ELB improved by 0.794454 iteration 48 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.124 ELB improved by 0.72406 iteration 49 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.505 ELB improved by 0.618347 iteration 50 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.006 ELB improved by 0.499148 iteration 51 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.617 ELB improved by 0.388642 iteration 52 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.319 ELB improved by 0.298314 iteration 53 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.09 ELB improved by 0.22943 iteration 54 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.911 ELB improved by 0.178301 iteration 55 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.771 ELB improved by 0.140276 iteration 56 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.659 ELB improved by 0.111572 iteration 57 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.57 ELB improved by 0.0896494 iteration 58 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.497 ELB improved by 0.0728787 iteration 59 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.437 ELB improved by 0.0600939 iteration 60 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.387 ELB improved by 0.0503515 iteration 61 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.344 ELB improved by 0.0428681 iteration 62 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.307 ELB improved by 0.0370203 iteration 63 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.274 ELB improved by 0.0323391 iteration 64 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.246 ELB improved by 0.0284905 iteration 65 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.221 ELB improved by 0.0252485 iteration 66 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.198 ELB improved by 0.0224684 iteration 67 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.178 ELB improved by 0.0200608 iteration 68 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.16 ELB improved by 0.0179706 iteration 69 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.144 ELB improved by 0.0161604 iteration 70 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.129 ELB improved by 0.0145998 iteration 71 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.116 ELB improved by 0.0132602 iteration 72 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.104 ELB improved by 0.0121133 iteration 73 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.093 ELB improved by 0.0111312 iteration 74 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.083 ELB improved by 0.0102881 iteration 75 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.073 ELB improved by 0.00956076 ELB converged [ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ] > > proc.time() user system elapsed 2.746 0.135 2.871
graper.Rcheck/graper-Ex.timings
name | user | system | elapsed | |
coef.graper | 0.053 | 0.000 | 0.054 | |
getPIPs | 0.045 | 0.004 | 0.049 | |
graper | 0.073 | 0.004 | 0.077 | |
makeExampleData | 0.006 | 0.003 | 0.009 | |
makeExampleDataWithUnequalGroups | 0.006 | 0.004 | 0.011 | |
plotELBO | 0.263 | 0.008 | 0.271 | |
plotGroupPenalties | 1.042 | 0.004 | 1.048 | |
plotPosterior | 0.921 | 0.008 | 0.930 | |
predict.graper | 0.963 | 0.024 | 0.988 | |
print.graper | 0.049 | 0.000 | 0.049 | |