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This page was generated on 2024-05-04 11:39:18 -0400 (Sat, 04 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" 4753
palomino3Windows Server 2022 Datacenterx644.4.0 beta (2024-04-15 r86425 ucrt) -- "Puppy Cup" 4486
lconwaymacOS 12.7.1 Montereyx86_644.4.0 beta (2024-04-14 r86421) -- "Puppy Cup" 4519
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" 4479
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 908/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
graper 1.20.0  (landing page)
Britta Velten
Snapshot Date: 2024-05-03 14:00:19 -0400 (Fri, 03 May 2024)
git_url: https://git.bioconductor.org/packages/graper
git_branch: RELEASE_3_19
git_last_commit: a4dfa52
git_last_commit_date: 2024-04-30 11:11:42 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    OK    OK  
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here

CHECK results for graper on lconway


To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: graper
Version: 1.20.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.20.0.tar.gz
StartedAt: 2024-05-03 22:21:22 -0400 (Fri, 03 May 2024)
EndedAt: 2024-05-03 22:22:36 -0400 (Fri, 03 May 2024)
EllapsedTime: 74.3 seconds
RetCode: 0
Status:   WARNINGS  
CheckDir: graper.Rcheck
Warnings: 1

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.20.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck’
* using R version 4.4.0 beta (2024-04-14 r86421)
* using platform: x86_64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Monterey 12.7.1
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.20.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... WARNING
Found the following significant warnings:
  /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
  #    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
See ‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00install.out’ for details.
* used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.sdk’
* checking C++ specification ... NOTE
  Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 3 NOTEs
See
  ‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00check.log’
for details.


Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using C++11
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c fit_graper.cpp -o fit_graper.o
In file included from fit_graper.cpp:4:
In file included from ./graper_linear_dense_ff.h:2:
In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/digamma.hpp:15:
In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/math_fwd.hpp:29:
In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11:
/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
#    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
     ^
1 warning generated.
clang++ -arch x86_64 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.4.0 beta (2024-04-14 r86421) -- "Puppy Cup"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-838.677
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-570.5
ELB improved by 268.177

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.923
ELB improved by 60.5762

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.892
ELB improved by 39.0309

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.286
ELB improved by 18.6061

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.375
ELB improved by 8.91141

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.739
ELB improved by 5.63576

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.948
ELB improved by 4.79141

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.24
ELB improved by 4.70794

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.641
ELB improved by 4.59862

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.557
ELB improved by 4.08402

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.355
ELB improved by 3.20227

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.07
ELB improved by 2.28485

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.487
ELB improved by 1.58353

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.36
ELB improved by 1.12635

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.518
ELB improved by 0.842608

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.85
ELB improved by 0.667814

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.287
ELB improved by 0.562537

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.783
ELB improved by 0.503989

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.304
ELB improved by 0.478886

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.825
ELB improved by 0.479624

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.324
ELB improved by 0.5011

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.786
ELB improved by 0.537522

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.204
ELB improved by 0.58221

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.572
ELB improved by 0.63209

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.883
ELB improved by 0.688315

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.135
ELB improved by 0.748436

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.331
ELB improved by 0.803715

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.48
ELB improved by 0.850984

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.582
ELB improved by 0.898608

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.626
ELB improved by 0.955953

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.597
ELB improved by 1.02833

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.478
ELB improved by 1.11951

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.244
ELB improved by 1.23411

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.864
ELB improved by 1.38026

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.3
ELB improved by 1.56399

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.532
ELB improved by 1.76791

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.524
ELB improved by 2.0076

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.357
ELB improved by 2.16751

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.543
ELB improved by 1.81387

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.297
ELB improved by 1.2455

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.457
ELB improved by 0.840104

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.841
ELB improved by 0.61618

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.334
ELB improved by 0.506919

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.898
ELB improved by 0.435926

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.551
ELB improved by 0.347152

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.307
ELB improved by 0.24429

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.144
ELB improved by 0.162641

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.032
ELB improved by 0.111782

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.95
ELB improved by 0.0821079

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.886
ELB improved by 0.0640199

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.834
ELB improved by 0.0520693

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.79
ELB improved by 0.0435785

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.753
ELB improved by 0.0372177

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.721
ELB improved by 0.0322748

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.693
ELB improved by 0.0283341

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.667
ELB improved by 0.0251341

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.645
ELB improved by 0.0224999

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.625
ELB improved by 0.0203078

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.606
ELB improved by 0.0184664

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.589
ELB improved by 0.0169044

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.574
ELB improved by 0.0155641

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.559
ELB improved by 0.0143967

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.546
ELB improved by 0.0133604

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.534
ELB improved by 0.0124193

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.522
ELB improved by 0.0115441

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.511
ELB improved by 0.0107126

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.501
ELB improved by 0.0099111

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-891.049
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-583.832
ELB improved by 307.217

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-521.866
ELB improved by 61.9656

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.475
ELB improved by 41.3908

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.857
ELB improved by 17.6179

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.356
ELB improved by 6.50155

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.904
ELB improved by 3.45205

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.378
ELB improved by 2.52601

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.231
ELB improved by 2.14726

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.265
ELB improved by 1.96515

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.394
ELB improved by 1.87161

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.562
ELB improved by 1.8318

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.731
ELB improved by 1.83128

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.877
ELB improved by 1.8542

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.005
ELB improved by 1.87122

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.168
ELB improved by 1.83766

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.458
ELB improved by 1.70956

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.982
ELB improved by 1.47567

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.806
ELB improved by 1.17636

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.926
ELB improved by 0.879966

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.288
ELB improved by 0.638091

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.822
ELB improved by 0.465801

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.469
ELB improved by 0.35288

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.188
ELB improved by 0.281528

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.952
ELB improved by 0.235625

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.749
ELB improved by 0.202822

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.574
ELB improved by 0.174946

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.426
ELB improved by 0.148604

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.302
ELB improved by 0.124114

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.199
ELB improved by 0.102747

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.114
ELB improved by 0.0851053

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.043
ELB improved by 0.0710927

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.983
ELB improved by 0.0602527

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.931
ELB improved by 0.0519889

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.885
ELB improved by 0.0457084

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.844
ELB improved by 0.040903

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.807
ELB improved by 0.0371768

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.772
ELB improved by 0.0342371

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.741
ELB improved by 0.0318737

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.711
ELB improved by 0.0299374

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.682
ELB improved by 0.0283219

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.655
ELB improved by 0.0269514

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.63
ELB improved by 0.0257711

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.605
ELB improved by 0.0247406

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.581
ELB improved by 0.0238303

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.558
ELB improved by 0.0230174

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.536
ELB improved by 0.0222847

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.514
ELB improved by 0.0216186

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.493
ELB improved by 0.0210084

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.473
ELB improved by 0.0204453

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.453
ELB improved by 0.0199224

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.433
ELB improved by 0.0194336

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.414
ELB improved by 0.0189743

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.396
ELB improved by 0.0185403

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.378
ELB improved by 0.0181283

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.36
ELB improved by 0.0177356

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.343
ELB improved by 0.0173597

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.326
ELB improved by 0.0169989

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.309
ELB improved by 0.0166516

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.293
ELB improved by 0.0163168

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.277
ELB improved by 0.0159936

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.261
ELB improved by 0.0156815

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.246
ELB improved by 0.0153801

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.23
ELB improved by 0.0150894

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.216
ELB improved by 0.0148095

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.201
ELB improved by 0.0145408

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.187
ELB improved by 0.0142836

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.173
ELB improved by 0.0140387

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.159
ELB improved by 0.0138069

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.145
ELB improved by 0.0135891

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.132
ELB improved by 0.0133864

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.119
ELB improved by 0.0132001

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.106
ELB improved by 0.0130316

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.093
ELB improved by 0.0128826

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.08
ELB improved by 0.012755

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.068
ELB improved by 0.012651

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.055
ELB improved by 0.012573

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.042
ELB improved by 0.0125241

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.03
ELB improved by 0.0125078

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.017
ELB improved by 0.0125284

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.005
ELB improved by 0.0125909

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.992
ELB improved by 0.0127016

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.979
ELB improved by 0.0128682

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.966
ELB improved by 0.0131002

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.953
ELB improved by 0.0134096

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.939
ELB improved by 0.0138114

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.925
ELB improved by 0.0143247

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.91
ELB improved by 0.0149741

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.894
ELB improved by 0.0157914

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.877
ELB improved by 0.0168179

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.859
ELB improved by 0.0181074

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.839
ELB improved by 0.019731

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.817
ELB improved by 0.0217815

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.793
ELB improved by 0.02438

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.765
ELB improved by 0.027681

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.733
ELB improved by 0.0318744

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.696
ELB improved by 0.0371752

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.652
ELB improved by 0.0437905

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.601
ELB improved by 0.0518473

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.539
ELB improved by 0.0612865

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.468
ELB improved by 0.0717838

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.385
ELB improved by 0.0828371

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.291
ELB improved by 0.0941312

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.185
ELB improved by 0.106034

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.065
ELB improved by 0.119858

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.927
ELB improved by 0.137714

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.765
ELB improved by 0.162168

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.569
ELB improved by 0.195725

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.329
ELB improved by 0.239594

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.039
ELB improved by 0.290602

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.701
ELB improved by 0.337541

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.335
ELB improved by 0.366226

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.961
ELB improved by 0.37377

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.593
ELB improved by 0.367945

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.239
ELB improved by 0.354632

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.903
ELB improved by 0.335271

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.593
ELB improved by 0.310179

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.313
ELB improved by 0.280296

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.066
ELB improved by 0.247349

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.852
ELB improved by 0.213487

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.671
ELB improved by 0.180807

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.52
ELB improved by 0.150938

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.396
ELB improved by 0.124832

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.293
ELB improved by 0.102782

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.208
ELB improved by 0.0845993

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.138
ELB improved by 0.0698277

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.08
ELB improved by 0.0579208

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.032
ELB improved by 0.0483491

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.991
ELB improved by 0.0406507

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.957
ELB improved by 0.0344439

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.928
ELB improved by 0.0294212

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.902
ELB improved by 0.025337

iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.88
ELB improved by 0.0219954

iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.861
ELB improved by 0.0192398

iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.844
ELB improved by 0.0169454

iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.829
ELB improved by 0.0150137

iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.816
ELB improved by 0.0133677

iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.804
ELB improved by 0.0119485

iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.793
ELB improved by 0.0107123

iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.783
ELB improved by 0.0096266

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-853.138
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-566.949
ELB improved by 286.189

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-507.61
ELB improved by 59.3385

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.969
ELB improved by 36.6415

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.883
ELB improved by 16.0854

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.324
ELB improved by 6.55921

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.696
ELB improved by 3.62767

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.009
ELB improved by 2.6871

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.668
ELB improved by 2.34092

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.481
ELB improved by 2.1874

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.375
ELB improved by 2.10581

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.313
ELB improved by 2.06188

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.281
ELB improved by 2.03212

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.299
ELB improved by 1.98245

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.433
ELB improved by 1.86612

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.788
ELB improved by 1.64423

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.464
ELB improved by 1.32404

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.492
ELB improved by 0.972089

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.824
ELB improved by 0.668129

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.373
ELB improved by 0.451119

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.058
ELB improved by 0.315073

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.822
ELB improved by 0.235794

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.631
ELB improved by 0.190832

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.466
ELB improved by 0.165198

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.316
ELB improved by 0.150257

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.174
ELB improved by 0.141376

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.038
ELB improved by 0.136139

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.905
ELB improved by 0.133294

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.773
ELB improved by 0.132182

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.64
ELB improved by 0.132449

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.506
ELB improved by 0.133908

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.37
ELB improved by 0.136464

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.23
ELB improved by 0.140093

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.085
ELB improved by 0.144823

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.934
ELB improved by 0.150742

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.776
ELB improved by 0.157999

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.609
ELB improved by 0.166811

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.432
ELB improved by 0.177476

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.242
ELB improved by 0.190376

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.036
ELB improved by 0.205979

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.811
ELB improved by 0.224828

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.563
ELB improved by 0.247514

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.289
ELB improved by 0.274603

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.982
ELB improved by 0.306521

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.639
ELB improved by 0.343348

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.254
ELB improved by 0.384541

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.826
ELB improved by 0.428612

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.353
ELB improved by 0.472879

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.839
ELB improved by 0.513501

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.293
ELB improved by 0.545976

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.727
ELB improved by 0.566192

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.155
ELB improved by 0.571724

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.593
ELB improved by 0.562781

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.051
ELB improved by 0.542043

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.538
ELB improved by 0.512882

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.062
ELB improved by 0.476132

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.633
ELB improved by 0.428321

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.266
ELB improved by 0.36744

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.965
ELB improved by 0.301077

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.724
ELB improved by 0.241034

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.531
ELB improved by 0.193041

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.374
ELB improved by 0.156332

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.246
ELB improved by 0.127951

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.141
ELB improved by 0.105406

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.054
ELB improved by 0.0872146

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.981
ELB improved by 0.0725433

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.92
ELB improved by 0.0608534

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.869
ELB improved by 0.0517406

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.824
ELB improved by 0.0448548

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.784
ELB improved by 0.0398353

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.748
ELB improved by 0.0362646

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.714
ELB improved by 0.033644

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.683
ELB improved by 0.0314108

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.654
ELB improved by 0.0290317

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.627
ELB improved by 0.0261765

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.605
ELB improved by 0.0228608

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.585
ELB improved by 0.0194045

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.569
ELB improved by 0.0162106

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.555
ELB improved by 0.0135479

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.544
ELB improved by 0.0114866

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.534
ELB improved by 0.00995883

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-893.1
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-579.212
ELB improved by 313.887

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-519.082
ELB improved by 60.1305

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-481.622
ELB improved by 37.4598

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.666
ELB improved by 15.9562

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.727
ELB improved by 6.93919

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.159
ELB improved by 4.5675

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.19
ELB improved by 3.96912

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.373
ELB improved by 3.81663

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.563
ELB improved by 3.80994

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.734
ELB improved by 3.82948

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.975
ELB improved by 3.75873

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.496
ELB improved by 3.47957

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.545
ELB improved by 2.95057

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.277
ELB improved by 2.26772

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.666
ELB improved by 1.61127

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.554
ELB improved by 1.11225

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.768
ELB improved by 0.785724

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.186
ELB improved by 0.582466

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.734
ELB improved by 0.452166

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.37
ELB improved by 0.363515

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.07
ELB improved by 0.299949

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.818
ELB improved by 0.252552

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.601
ELB improved by 0.216092

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.414
ELB improved by 0.187295

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.25
ELB improved by 0.164034

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.105
ELB improved by 0.14489

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.976
ELB improved by 0.128899

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.861
ELB improved by 0.115392

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.757
ELB improved by 0.103896

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.663
ELB improved by 0.0940661

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.577
ELB improved by 0.0856381

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.499
ELB improved by 0.0783981

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.427
ELB improved by 0.0721646

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.36
ELB improved by 0.06678

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.298
ELB improved by 0.0621075

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.24
ELB improved by 0.0580297

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.185
ELB improved by 0.0544472

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.134
ELB improved by 0.0512769

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.086
ELB improved by 0.0484503

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.04
ELB improved by 0.0459109

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.996
ELB improved by 0.0436126

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.955
ELB improved by 0.0415173

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.915
ELB improved by 0.0395939

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.877
ELB improved by 0.0378167

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.841
ELB improved by 0.0361644

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.806
ELB improved by 0.0346195

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.773
ELB improved by 0.0331676

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.741
ELB improved by 0.0317969

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.711
ELB improved by 0.0304975

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.682
ELB improved by 0.0292616

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.654
ELB improved by 0.0280828

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.627
ELB improved by 0.0269558

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.601
ELB improved by 0.0258767

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.576
ELB improved by 0.0248419

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.552
ELB improved by 0.0238488

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.529
ELB improved by 0.0228951

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.507
ELB improved by 0.0219788

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.486
ELB improved by 0.0210982

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.466
ELB improved by 0.0202517

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.446
ELB improved by 0.0194375

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.428
ELB improved by 0.0186543

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.41
ELB improved by 0.0179004

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.393
ELB improved by 0.0171742

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.376
ELB improved by 0.0164742

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.36
ELB improved by 0.015799

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.345
ELB improved by 0.0151472

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.331
ELB improved by 0.0145177

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.317
ELB improved by 0.0139094

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.304
ELB improved by 0.0133216

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.291
ELB improved by 0.0127537

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.279
ELB improved by 0.0122054

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.267
ELB improved by 0.0116764

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.256
ELB improved by 0.0111667

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.245
ELB improved by 0.0106764

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.235
ELB improved by 0.0102053

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.225
ELB improved by 0.00975367

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.733   0.302   3.074 

Example timings

graper.Rcheck/graper-Ex.timings

nameusersystemelapsed
coef.graper0.0540.0190.074
getPIPs0.0510.0150.067
graper0.0870.0230.111
makeExampleData0.0130.0020.015
makeExampleDataWithUnequalGroups0.0310.0030.034
plotELBO0.2370.0220.261
plotGroupPenalties0.8300.0320.870
plotPosterior0.6560.0260.691
predict.graper2.1320.1152.286
print.graper0.0510.0130.066