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This page was generated on 2024-05-04 11:40:36 -0400 (Sat, 04 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" 4753
palomino3Windows Server 2022 Datacenterx644.4.0 beta (2024-04-15 r86425 ucrt) -- "Puppy Cup" 4486
lconwaymacOS 12.7.1 Montereyx86_644.4.0 beta (2024-04-14 r86421) -- "Puppy Cup" 4519
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" 4479
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 908/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
graper 1.20.0  (landing page)
Britta Velten
Snapshot Date: 2024-05-03 14:00:19 -0400 (Fri, 03 May 2024)
git_url: https://git.bioconductor.org/packages/graper
git_branch: RELEASE_3_19
git_last_commit: a4dfa52
git_last_commit_date: 2024-04-30 11:11:42 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    OK    OK  
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here

CHECK results for graper on kunpeng2


To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results


Summary

Package: graper
Version: 1.20.0
Command: /home/biocbuild/R/R-beta-2024-04-15_r86425/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library --no-vignettes --timings graper_1.20.0.tar.gz
StartedAt: 2024-05-04 08:10:31 -0000 (Sat, 04 May 2024)
EndedAt: 2024-05-04 08:11:39 -0000 (Sat, 04 May 2024)
EllapsedTime: 68.1 seconds
RetCode: 0
Status:   OK  
CheckDir: graper.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R-beta-2024-04-15_r86425/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library --no-vignettes --timings graper_1.20.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck’
* using R version 4.4.0 beta (2024-04-15 r86425)
* using platform: aarch64-unknown-linux-gnu
* R was compiled by
    gcc (GCC) 10.3.1
    GNU Fortran (GCC) 10.3.1
* running under: openEuler 22.03 (LTS-SP1)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.20.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (GCC) 10.3.1’
* checking C++ specification ... NOTE
  Specified C++11: please drop specification unless essential
* checking installed package size ... NOTE
  installed size is  7.7Mb
  sub-directories of 1Mb or more:
    libs   7.5Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 4 NOTEs
See
  ‘/home/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00check.log’
for details.


Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R-beta-2024-04-15_r86425/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 10.3.1’
using C++11
g++ -std=gnu++11 -I"/home/biocbuild/R/R-beta-2024-04-15_r86425/include" -DNDEBUG  -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/Rcpp/include' -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/RcppArmadillo/include' -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include' -I/usr/local/include    -fPIC  -g -O2  -Wall  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/R/R-beta-2024-04-15_r86425/include" -DNDEBUG  -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/Rcpp/include' -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/RcppArmadillo/include' -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include' -I/usr/local/include    -fPIC  -g -O2  -Wall  -c fit_graper.cpp -o fit_graper.o
In file included from /home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11,
                 from /home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include/boost/math/special_functions/math_fwd.hpp:29,
                 from /home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include/boost/math/special_functions/digamma.hpp:15,
                 from graper_linear_dense_ff.h:2,
                 from fit_graper.cpp:4:
/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp]
   23 | #    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
      |      ^~~~~~~
g++ -std=gnu++11 -shared -L/home/biocbuild/R/R-beta-2024-04-15_r86425/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -lopenblas -lgfortran -lm -L/home/biocbuild/R/R-beta-2024-04-15_r86425/lib -lR
installing to /home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.4.0 beta (2024-04-15 r86425) -- "Puppy Cup"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-877.21
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-611.795
ELB improved by 265.415

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-554.688
ELB improved by 57.1063

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-506.129
ELB improved by 48.5595

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.419
ELB improved by 25.7103

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.04
ELB improved by 10.3783

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.802
ELB improved by 6.23807

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.113
ELB improved by 5.68933

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.348
ELB improved by 5.76447

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.776
ELB improved by 5.57227

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.962
ELB improved by 4.81427

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.292
ELB improved by 3.67012

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.731
ELB improved by 2.56028

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.991
ELB improved by 1.73992

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.765
ELB improved by 1.22608

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.831
ELB improved by 0.93425

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.047
ELB improved by 0.783978

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.32
ELB improved by 0.727584

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.574
ELB improved by 0.7459

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.739
ELB improved by 0.834817

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.811
ELB improved by 0.927531

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.943
ELB improved by 0.868716

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.239
ELB improved by 0.70334

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.664
ELB improved by 0.574798

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.162
ELB improved by 0.50298

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.699
ELB improved by 0.462255

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.271
ELB improved by 0.428735

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.878
ELB improved by 0.392094

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.522
ELB improved by 0.35594

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.196
ELB improved by 0.326218

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.892
ELB improved by 0.303883

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.605
ELB improved by 0.286969

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.332
ELB improved by 0.273525

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.069
ELB improved by 0.262395

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.816
ELB improved by 0.253017

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.571
ELB improved by 0.245129

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.333
ELB improved by 0.238568

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.1
ELB improved by 0.233179

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.871
ELB improved by 0.228765

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.646
ELB improved by 0.225062

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.424
ELB improved by 0.221736

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.206
ELB improved by 0.218386

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.991
ELB improved by 0.214558

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.781
ELB improved by 0.209791

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.578
ELB improved by 0.203664

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.382
ELB improved by 0.195868

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.196
ELB improved by 0.186264

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.021
ELB improved by 0.174929

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.858
ELB improved by 0.162159

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.71
ELB improved by 0.148424

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.576
ELB improved by 0.134296

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.455
ELB improved by 0.120358

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.348
ELB improved by 0.107123

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.253
ELB improved by 0.0949811

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.169
ELB improved by 0.0841804

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.094
ELB improved by 0.0748331

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.027
ELB improved by 0.0669407

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.967
ELB improved by 0.0604241

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.912
ELB improved by 0.0551528

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.861
ELB improved by 0.0509742

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.813
ELB improved by 0.0477428

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.768
ELB improved by 0.045359

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.724
ELB improved by 0.0438227

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.68
ELB improved by 0.0433138

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.636
ELB improved by 0.0443295

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.588
ELB improved by 0.0479354

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.532
ELB improved by 0.0562208

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.459
ELB improved by 0.0728983

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.356
ELB improved by 0.102922

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.209
ELB improved by 0.146987

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.02
ELB improved by 0.188989

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.82
ELB improved by 0.200162

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.645
ELB improved by 0.174579

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.511
ELB improved by 0.13449

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.41
ELB improved by 0.10117

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.327
ELB improved by 0.0831336

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.245
ELB improved by 0.0812812

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.15
ELB improved by 0.0949218

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.029
ELB improved by 0.121015

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.884
ELB improved by 0.145352

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.739
ELB improved by 0.144874

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.62
ELB improved by 0.119236

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.528
ELB improved by 0.0915588

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.454
ELB improved by 0.0747852

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.385
ELB improved by 0.0687025

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.314
ELB improved by 0.0705978

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.235
ELB improved by 0.0791063

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.141
ELB improved by 0.0941051

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.026
ELB improved by 0.115585

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.884
ELB improved by 0.14191

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.716
ELB improved by 0.168142

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.526
ELB improved by 0.189531

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.312
ELB improved by 0.214336

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.054
ELB improved by 0.257638

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.776
ELB improved by 0.278409

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.563
ELB improved by 0.21287

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.442
ELB improved by 0.120761

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.379
ELB improved by 0.0627895

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.345
ELB improved by 0.0346015

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.323
ELB improved by 0.0213076

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.309
ELB improved by 0.0146726

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.298
ELB improved by 0.0110772

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.289
ELB improved by 0.00895874

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-872.047
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-556.994
ELB improved by 315.053

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-499.871
ELB improved by 57.1228

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.92
ELB improved by 28.9518

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.191
ELB improved by 10.7287

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.988
ELB improved by 5.20289

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.092
ELB improved by 3.89653

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.241
ELB improved by 3.85071

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.991
ELB improved by 4.24957

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.232
ELB improved by 4.75951

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.223
ELB improved by 5.00916

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.627
ELB improved by 4.59542

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.104
ELB improved by 3.52321

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.781
ELB improved by 2.32283

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.331
ELB improved by 1.44968

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.389
ELB improved by 0.942385

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.725
ELB improved by 0.663757

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.219
ELB improved by 0.506177

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.807
ELB improved by 0.412604

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.452
ELB improved by 0.354262

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.136
ELB improved by 0.316281

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.845
ELB improved by 0.290741

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.572
ELB improved by 0.273237

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.311
ELB improved by 0.26117

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.058
ELB improved by 0.252891

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.811
ELB improved by 0.247253

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.567
ELB improved by 0.243354

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.327
ELB improved by 0.240367

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.089
ELB improved by 0.237457

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.856
ELB improved by 0.233816

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.627
ELB improved by 0.228812

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.405
ELB improved by 0.222152

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.191
ELB improved by 0.213899

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.986
ELB improved by 0.204346

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.793
ELB improved by 0.193862

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.61
ELB improved by 0.18281

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.438
ELB improved by 0.171509

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.278
ELB improved by 0.160228

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.129
ELB improved by 0.14918

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.99
ELB improved by 0.138524

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.862
ELB improved by 0.12837

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.743
ELB improved by 0.118781

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.633
ELB improved by 0.10979

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.532
ELB improved by 0.1014

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.438
ELB improved by 0.0935988

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.352
ELB improved by 0.0863605

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.272
ELB improved by 0.0796544

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.199
ELB improved by 0.0734469

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.131
ELB improved by 0.067704

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.069
ELB improved by 0.0623931

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.011
ELB improved by 0.0574834

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.958
ELB improved by 0.0529467

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.91
ELB improved by 0.0487569

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.865
ELB improved by 0.0448899

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.823
ELB improved by 0.0413237

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.785
ELB improved by 0.0380377

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.75
ELB improved by 0.0350128

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.718
ELB improved by 0.0322309

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.689
ELB improved by 0.029675

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.661
ELB improved by 0.027329

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.636
ELB improved by 0.0251777

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.613
ELB improved by 0.0232064

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.591
ELB improved by 0.0214015

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.572
ELB improved by 0.0197501

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.553
ELB improved by 0.0182399

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.537
ELB improved by 0.0168594

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.521
ELB improved by 0.0155978

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.506
ELB improved by 0.0144453

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.493
ELB improved by 0.0133924

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.481
ELB improved by 0.0124306

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.469
ELB improved by 0.0115519

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.458
ELB improved by 0.0107489

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.448
ELB improved by 0.010015

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.439
ELB improved by 0.00934399

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-859.091
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-596.434
ELB improved by 262.657

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-534.985
ELB improved by 61.4496

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-493.199
ELB improved by 41.7855

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.763
ELB improved by 20.4359

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.261
ELB improved by 9.50258

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.199
ELB improved by 6.06193

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.661
ELB improved by 5.53761

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.641
ELB improved by 6.01975

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.891
ELB improved by 6.75044

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.911
ELB improved by 6.98024

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.86
ELB improved by 6.05086

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.462
ELB improved by 4.39758

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.447
ELB improved by 3.01541

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.282
ELB improved by 2.16499

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.633
ELB improved by 1.64878

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.331
ELB improved by 1.30215

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.333
ELB improved by 0.997842

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.604
ELB improved by 0.729274

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.063
ELB improved by 0.5411

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.641
ELB improved by 0.422159

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.296
ELB improved by 0.344653

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.005
ELB improved by 0.290959

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.753
ELB improved by 0.251928

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.53
ELB improved by 0.222641

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.33
ELB improved by 0.200193

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.147
ELB improved by 0.18272

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.979
ELB improved by 0.168943

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.821
ELB improved by 0.157945

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.672
ELB improved by 0.149044

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.53
ELB improved by 0.141721

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.394
ELB improved by 0.135568

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.264
ELB improved by 0.130267

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.138
ELB improved by 0.125559

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.017
ELB improved by 0.121237

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.9
ELB improved by 0.117137

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.787
ELB improved by 0.11313

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.678
ELB improved by 0.109122

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.573
ELB improved by 0.105049

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.472
ELB improved by 0.100877

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.375
ELB improved by 0.0965968

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.283
ELB improved by 0.0922234

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.195
ELB improved by 0.087788

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.112
ELB improved by 0.0833337

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.033
ELB improved by 0.0789086

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.958
ELB improved by 0.0745607

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.888
ELB improved by 0.0703338

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.822
ELB improved by 0.0662643

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.76
ELB improved by 0.06238

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.701
ELB improved by 0.0586997

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.646
ELB improved by 0.0552341

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.594
ELB improved by 0.0519867

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.545
ELB improved by 0.0489554

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.498
ELB improved by 0.046134

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.455
ELB improved by 0.0435133

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.414
ELB improved by 0.0410823

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.375
ELB improved by 0.038829

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.338
ELB improved by 0.0367411

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.304
ELB improved by 0.0348065

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.271
ELB improved by 0.0330137

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.239
ELB improved by 0.0313515

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.209
ELB improved by 0.0298098

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.181
ELB improved by 0.0283793

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.154
ELB improved by 0.0270513

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.128
ELB improved by 0.0258181

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.103
ELB improved by 0.0246726

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.08
ELB improved by 0.0236083

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.057
ELB improved by 0.0226197

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.035
ELB improved by 0.0217015

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.015
ELB improved by 0.0208491

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.995
ELB improved by 0.0200584

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.975
ELB improved by 0.0193257

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.957
ELB improved by 0.018648

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.939
ELB improved by 0.0180225

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.921
ELB improved by 0.0174469

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.904
ELB improved by 0.0169196

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.888
ELB improved by 0.0164395

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.872
ELB improved by 0.0160061

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.856
ELB improved by 0.0156197

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.841
ELB improved by 0.0152817

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.826
ELB improved by 0.0149949

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.811
ELB improved by 0.014764

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.797
ELB improved by 0.0145961

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.782
ELB improved by 0.0145022

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.768
ELB improved by 0.0144988

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.753
ELB improved by 0.0146109

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.738
ELB improved by 0.0148769

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.723
ELB improved by 0.015357

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.707
ELB improved by 0.0161483

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.689
ELB improved by 0.0174116

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.67
ELB improved by 0.0194212

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.647
ELB improved by 0.0226568

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.619
ELB improved by 0.0279644

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.582
ELB improved by 0.0367968

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.531
ELB improved by 0.0513699

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.457
ELB improved by 0.0739811

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.353
ELB improved by 0.104094

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.218
ELB improved by 0.135308

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.055
ELB improved by 0.162681

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.856
ELB improved by 0.198607

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.578
ELB improved by 0.27825

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.125
ELB improved by 0.452581

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.449
ELB improved by 0.676418

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.736
ELB improved by 0.713399

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.138
ELB improved by 0.597927

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.649
ELB improved by 0.488501

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.243
ELB improved by 0.406612

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.903
ELB improved by 0.339323

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.627
ELB improved by 0.276705

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.408
ELB improved by 0.218168

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.241
ELB improved by 0.167769

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.113
ELB improved by 0.127254

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.018
ELB improved by 0.0956094

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.946
ELB improved by 0.0712749

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.893
ELB improved by 0.0530804

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.853
ELB improved by 0.040084

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.822
ELB improved by 0.0313374

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.796
ELB improved by 0.0258989

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.773
ELB improved by 0.0229411

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.751
ELB improved by 0.0217876

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.729
ELB improved by 0.0218396

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.707
ELB improved by 0.0224409

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.684
ELB improved by 0.022793

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.662
ELB improved by 0.0220925

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.642
ELB improved by 0.0199365

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.626
ELB improved by 0.01665

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.612
ELB improved by 0.0130719

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.603
ELB improved by 0.00995275

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-883.57
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-577.357
ELB improved by 306.213

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-518.81
ELB improved by 58.5468

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-481.949
ELB improved by 36.8607

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.321
ELB improved by 15.628

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.951
ELB improved by 7.37078

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.035
ELB improved by 4.91558

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.863
ELB improved by 4.17233

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.929
ELB improved by 3.93325

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.145
ELB improved by 3.78433

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.586
ELB improved by 3.55923

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.353
ELB improved by 3.23293

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.534
ELB improved by 2.81878

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.227
ELB improved by 2.30679

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.457
ELB improved by 1.7704

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.137
ELB improved by 1.32

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.147
ELB improved by 0.990181

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.388
ELB improved by 0.758978

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.796
ELB improved by 0.591526

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.33
ELB improved by 0.466002

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.956
ELB improved by 0.37445

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.645
ELB improved by 0.310615

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.378
ELB improved by 0.266857

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.142
ELB improved by 0.2367

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.926
ELB improved by 0.215826

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.724
ELB improved by 0.201636

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.532
ELB improved by 0.192619

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.344
ELB improved by 0.187915

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.157
ELB improved by 0.18707

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.967
ELB improved by 0.189892

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.77
ELB improved by 0.196383

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.564
ELB improved by 0.206703

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.342
ELB improved by 0.22115

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.102
ELB improved by 0.240159

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.838
ELB improved by 0.264294

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.544
ELB improved by 0.294248

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.213
ELB improved by 0.330821

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.838
ELB improved by 0.37486

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.411
ELB improved by 0.427097

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.923
ELB improved by 0.487806

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.367
ELB improved by 0.556175

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.738
ELB improved by 0.62939

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.036
ELB improved by 0.701782

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.271
ELB improved by 0.764762

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.463
ELB improved by 0.807999

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.642
ELB improved by 0.821007

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.848
ELB improved by 0.794454

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.124
ELB improved by 0.72406

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.505
ELB improved by 0.618347

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.006
ELB improved by 0.499148

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.617
ELB improved by 0.388642

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.319
ELB improved by 0.298314

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.09
ELB improved by 0.22943

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.911
ELB improved by 0.178301

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.771
ELB improved by 0.140276

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.659
ELB improved by 0.111572

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.57
ELB improved by 0.0896494

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.497
ELB improved by 0.0728787

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.437
ELB improved by 0.0600939

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.387
ELB improved by 0.0503515

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.344
ELB improved by 0.0428681

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.307
ELB improved by 0.0370203

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.274
ELB improved by 0.0323391

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.246
ELB improved by 0.0284905

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.221
ELB improved by 0.0252485

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.198
ELB improved by 0.0224684

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.178
ELB improved by 0.0200608

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.16
ELB improved by 0.0179706

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.144
ELB improved by 0.0161604

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.129
ELB improved by 0.0145998

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.116
ELB improved by 0.0132602

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.104
ELB improved by 0.0121133

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.093
ELB improved by 0.0111312

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.083
ELB improved by 0.0102881

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.073
ELB improved by 0.00956076

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.746   0.135   2.871 

Example timings

graper.Rcheck/graper-Ex.timings

nameusersystemelapsed
coef.graper0.0530.0000.054
getPIPs0.0450.0040.049
graper0.0730.0040.077
makeExampleData0.0060.0030.009
makeExampleDataWithUnequalGroups0.0060.0040.011
plotELBO0.2630.0080.271
plotGroupPenalties1.0420.0041.048
plotPosterior0.9210.0080.930
predict.graper0.9630.0240.988
print.graper0.0490.0000.049