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This page was generated on 2024-05-04 11:37:52 -0400 (Sat, 04 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" 4753
palomino3Windows Server 2022 Datacenterx644.4.0 beta (2024-04-15 r86425 ucrt) -- "Puppy Cup" 4486
lconwaymacOS 12.7.1 Montereyx86_644.4.0 beta (2024-04-14 r86421) -- "Puppy Cup" 4519
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" 4479
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 908/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
graper 1.20.0  (landing page)
Britta Velten
Snapshot Date: 2024-05-03 14:00:19 -0400 (Fri, 03 May 2024)
git_url: https://git.bioconductor.org/packages/graper
git_branch: RELEASE_3_19
git_last_commit: a4dfa52
git_last_commit_date: 2024-04-30 11:11:42 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    OK    OK  
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here

CHECK results for graper on palomino3


To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: graper
Version: 1.20.0
Command: F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:graper.install-out.txt --library=F:\biocbuild\bbs-3.19-bioc\R\library --no-vignettes --timings graper_1.20.0.tar.gz
StartedAt: 2024-05-04 04:07:03 -0400 (Sat, 04 May 2024)
EndedAt: 2024-05-04 04:08:36 -0400 (Sat, 04 May 2024)
EllapsedTime: 93.5 seconds
RetCode: 0
Status:   OK  
CheckDir: graper.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:graper.install-out.txt --library=F:\biocbuild\bbs-3.19-bioc\R\library --no-vignettes --timings graper_1.20.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory 'F:/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck'
* using R version 4.4.0 beta (2024-04-15 r86425 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'graper/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'graper' version '1.20.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'graper' can be installed ... OK
* used C++ compiler: 'G__~1.EXE (GCC) 13.2.0'
* checking C++ specification ... NOTE
  Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files for x64 is not available
File 'F:/biocbuild/bbs-3.19-bioc/R/library/graper/libs/x64/graper.dll':
  Found '_exit', possibly from '_exit' (C)
  Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
  Found 'exit', possibly from 'exit' (C), 'stop' (Fortran)

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs nor [v]sprintf. The detected symbols are linked into
the code but might come from libraries and not actually be called.

See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
  Running 'testthat.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 3 NOTEs
See
  'F:/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00check.log'
for details.


Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library 'F:/biocbuild/bbs-3.19-bioc/R/library'
* installing *source* package 'graper' ...
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 13.2.0'
using C++11
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.19-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.19-bioc/R/library/RcppArmadillo/include' -I'F:/biocbuild/bbs-3.19-bioc/R/library/BH/include'   -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.19-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.19-bioc/R/library/RcppArmadillo/include' -I'F:/biocbuild/bbs-3.19-bioc/R/library/BH/include'   -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c fit_graper.cpp -o fit_graper.o
In file included from F:/biocbuild/bbs-3.19-bioc/R/library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11,
                 from F:/biocbuild/bbs-3.19-bioc/R/library/BH/include/boost/math/special_functions/math_fwd.hpp:29,
                 from F:/biocbuild/bbs-3.19-bioc/R/library/BH/include/boost/math/special_functions/digamma.hpp:15,
                 from graper_linear_dense_ff.h:2,
                 from fit_graper.cpp:4:
F:/biocbuild/bbs-3.19-bioc/R/library/BH/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp]
   23 | #    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
      |      ^~~~~~~
g++ -shared -s -static-libgcc -o graper.dll tmp.def RcppExports.o fit_graper.o -LF:/biocbuild/bbs-3.19-bioc/R/bin/x64 -lRlapack -LF:/biocbuild/bbs-3.19-bioc/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.19-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.19-bioc/R/library/00LOCK-graper/00new/graper/libs/x64
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.4.0 beta (2024-04-15 r86425 ucrt) -- "Puppy Cup"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-884.403
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-564.214
ELB improved by 320.189

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-511.879
ELB improved by 52.335

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-483.696
ELB improved by 28.1823

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.727
ELB improved by 13.969

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.804
ELB improved by 7.92318

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.4
ELB improved by 6.40426

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.017
ELB improved by 6.38264

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.777
ELB improved by 6.24018

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.273
ELB improved by 5.50384

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.828
ELB improved by 4.44521

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.366
ELB improved by 3.46252

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.65
ELB improved by 2.71581

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.473
ELB improved by 2.17641

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.745
ELB improved by 1.72835

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.413
ELB improved by 1.33242

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.355
ELB improved by 1.05807

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.441
ELB improved by 0.913679

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.6
ELB improved by 0.84078

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.851
ELB improved by 0.749333

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.247
ELB improved by 0.603956

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.787
ELB improved by 0.460072

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.432
ELB improved by 0.355104

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.147
ELB improved by 0.284503

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.912
ELB improved by 0.235596

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.712
ELB improved by 0.199794

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.539
ELB improved by 0.172431

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.388
ELB improved by 0.150984

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.254
ELB improved by 0.133937

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.134
ELB improved by 0.120264

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.025
ELB improved by 0.109228

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.925
ELB improved by 0.100294

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.832
ELB improved by 0.0930799

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.744
ELB improved by 0.0873142

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.661
ELB improved by 0.0828144

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.582
ELB improved by 0.079469

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.505
ELB improved by 0.0772305

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.429
ELB improved by 0.0761158

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.352
ELB improved by 0.0762135

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.275
ELB improved by 0.0776973

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.194
ELB improved by 0.08084

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.108
ELB improved by 0.0860155

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.014
ELB improved by 0.093656

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.91
ELB improved by 0.104106

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.793
ELB improved by 0.117324

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.66
ELB improved by 0.132531

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.512
ELB improved by 0.148194

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.349
ELB improved by 0.162755

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.174
ELB improved by 0.175648

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.986
ELB improved by 0.187492

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.787
ELB improved by 0.19937

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.575
ELB improved by 0.212208

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.348
ELB improved by 0.226693

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.104
ELB improved by 0.243429

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.841
ELB improved by 0.263048

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.555
ELB improved by 0.28623

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.241
ELB improved by 0.31367

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.895
ELB improved by 0.345999

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.512
ELB improved by 0.383668

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.085
ELB improved by 0.426748

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.61
ELB improved by 0.47464

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.085
ELB improved by 0.5256

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.509
ELB improved by 0.575923

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.89
ELB improved by 0.618739

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.247
ELB improved by 0.643472

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.608
ELB improved by 0.638977

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.007
ELB improved by 0.600769

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.472
ELB improved by 0.534958

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.018
ELB improved by 0.454201

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.646
ELB improved by 0.371313

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.351
ELB improved by 0.295459

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.12
ELB improved by 0.231223

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.94
ELB improved by 0.179532

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.801
ELB improved by 0.139225

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.693
ELB improved by 0.108342

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.608
ELB improved by 0.0848719

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.541
ELB improved by 0.0670693

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.487
ELB improved by 0.053532

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.444
ELB improved by 0.0431797

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.409
ELB improved by 0.0351986

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.38
ELB improved by 0.0289838

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.356
ELB improved by 0.0240904

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.336
ELB improved by 0.0201935

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.318
ELB improved by 0.0170576

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.304
ELB improved by 0.0145115

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.292
ELB improved by 0.0124307

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.281
ELB improved by 0.0107223

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.271
ELB improved by 0.00931598

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-884.782
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-590.338
ELB improved by 294.444

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-526.685
ELB improved by 63.6523

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.414
ELB improved by 48.2716

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.323
ELB improved by 23.0906

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.948
ELB improved by 8.37561

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.219
ELB improved by 4.7291

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.465
ELB improved by 3.75377

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.034
ELB improved by 3.43122

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.692
ELB improved by 3.34112

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.381
ELB improved by 3.31097

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.112
ELB improved by 3.26995

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.927
ELB improved by 3.18465

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.908
ELB improved by 3.01879

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.179
ELB improved by 2.72888

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.878
ELB improved by 2.30106

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.094
ELB improved by 1.78412

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.811
ELB improved by 1.28272

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.926
ELB improved by 0.885374

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.314
ELB improved by 0.612043

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.877
ELB improved by 0.436994

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.55
ELB improved by 0.326617

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.295
ELB improved by 0.255551

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.087
ELB improved by 0.207927

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.912
ELB improved by 0.174497

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.762
ELB improved by 0.149961

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.631
ELB improved by 0.131235

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.515
ELB improved by 0.116472

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.41
ELB improved by 0.104529

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.315
ELB improved by 0.0946707

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.229
ELB improved by 0.0864124

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.15
ELB improved by 0.0794231

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.076
ELB improved by 0.0734714

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.008
ELB improved by 0.0683922

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.944
ELB improved by 0.0640666

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.883
ELB improved by 0.0604093

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.826
ELB improved by 0.0573613

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.771
ELB improved by 0.0548858

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.718
ELB improved by 0.052966

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.666
ELB improved by 0.0516053

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.616
ELB improved by 0.0508271

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.565
ELB improved by 0.0506757

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.514
ELB improved by 0.0512151

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.461
ELB improved by 0.0525229

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.407
ELB improved by 0.0546739

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.349
ELB improved by 0.0577075

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.287
ELB improved by 0.0615731

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.221
ELB improved by 0.0660628

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.15
ELB improved by 0.0707702

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.075
ELB improved by 0.0751369

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.997
ELB improved by 0.078628

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.916
ELB improved by 0.0809647

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.833
ELB improved by 0.0822456

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.751
ELB improved by 0.0828522

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.667
ELB improved by 0.0832301

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.584
ELB improved by 0.0837163

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.499
ELB improved by 0.0844883

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.414
ELB improved by 0.0855994

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.326
ELB improved by 0.0870363

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.238
ELB improved by 0.088765

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.147
ELB improved by 0.0907562

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.054
ELB improved by 0.0929959

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.958
ELB improved by 0.0954837

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.86
ELB improved by 0.0982239

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.759
ELB improved by 0.101209

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.655
ELB improved by 0.104395

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.547
ELB improved by 0.107681

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.436
ELB improved by 0.11089

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.322
ELB improved by 0.113783

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.206
ELB improved by 0.116121

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.088
ELB improved by 0.117742

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.97
ELB improved by 0.118634

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.851
ELB improved by 0.118944

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.732
ELB improved by 0.118927

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.613
ELB improved by 0.118868

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.494
ELB improved by 0.119017

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.375
ELB improved by 0.119558

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.254
ELB improved by 0.120602

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.132
ELB improved by 0.122198

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.007
ELB improved by 0.12434

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.88
ELB improved by 0.126983

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.75
ELB improved by 0.130063

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.617
ELB improved by 0.133519

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.479
ELB improved by 0.137337

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.338
ELB improved by 0.141616

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.191
ELB improved by 0.146675

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.038
ELB improved by 0.153184

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.876
ELB improved by 0.162161

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.702
ELB improved by 0.1742

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.515
ELB improved by 0.186749

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.324
ELB improved by 0.190962

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.146
ELB improved by 0.178048

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.993
ELB improved by 0.153183

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.864
ELB improved by 0.128937

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.754
ELB improved by 0.110026

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.659
ELB improved by 0.0950677

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.576
ELB improved by 0.0822465

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.506
ELB improved by 0.0706665

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.446
ELB improved by 0.0600667

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.395
ELB improved by 0.0504833

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.353
ELB improved by 0.0420383

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.318
ELB improved by 0.034818

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.29
ELB improved by 0.0288201

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.266
ELB improved by 0.0239549

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.245
ELB improved by 0.0200737

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.228
ELB improved by 0.0170051

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.214
ELB improved by 0.0145828

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.201
ELB improved by 0.0126622

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.19
ELB improved by 0.011126

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.18
ELB improved by 0.00988333

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-902.579
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-567.257
ELB improved by 335.321

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-508.836
ELB improved by 58.4214

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.476
ELB improved by 34.3604

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.889
ELB improved by 13.5868

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.771
ELB improved by 5.11776

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.868
ELB improved by 2.90305

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.661
ELB improved by 2.20703

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.694
ELB improved by 1.96737

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.763
ELB improved by 1.93017

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.762
ELB improved by 2.00145

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.622
ELB improved by 2.13952

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.319
ELB improved by 2.30342

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.897
ELB improved by 2.42223

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.498
ELB improved by 2.39881

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.327
ELB improved by 2.17097

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.547
ELB improved by 1.77969

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.203
ELB improved by 1.34452

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.235
ELB improved by 0.967812

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.547
ELB improved by 0.688156

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.048
ELB improved by 0.499218

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.67
ELB improved by 0.377247

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.372
ELB improved by 0.298402

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.126
ELB improved by 0.245776

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.917
ELB improved by 0.209148

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.734
ELB improved by 0.182628

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.572
ELB improved by 0.162771

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.424
ELB improved by 0.147477

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.289
ELB improved by 0.135409

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.163
ELB improved by 0.125688

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.045
ELB improved by 0.117722

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.934
ELB improved by 0.111113

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.829
ELB improved by 0.105598

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.728
ELB improved by 0.101003

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.63
ELB improved by 0.0972273

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.536
ELB improved by 0.0942143

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.444
ELB improved by 0.0919427

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.354
ELB improved by 0.0904128

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.264
ELB improved by 0.0896376

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.174
ELB improved by 0.0896415

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.084
ELB improved by 0.090475

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.992
ELB improved by 0.0922565

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.897
ELB improved by 0.0952621

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.796
ELB improved by 0.100082

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.689
ELB improved by 0.107894

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.568
ELB improved by 0.120931

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.424
ELB improved by 0.143156

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.244
ELB improved by 0.180081

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.012
ELB improved by 0.232803

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.729
ELB improved by 0.282131

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.433
ELB improved by 0.296433

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.151
ELB improved by 0.281621

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.883
ELB improved by 0.268448

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.609
ELB improved by 0.274154

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.295
ELB improved by 0.313303

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.885
ELB improved by 0.410031

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.318
ELB improved by 0.567556

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.627
ELB improved by 0.690738

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.968
ELB improved by 0.658797

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.443
ELB improved by 0.525398

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.029
ELB improved by 0.413702

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.685
ELB improved by 0.343925

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.387
ELB improved by 0.298015

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.124
ELB improved by 0.263373

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.89
ELB improved by 0.234072

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.682
ELB improved by 0.207902

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.498
ELB improved by 0.184157

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.335
ELB improved by 0.162307

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.194
ELB improved by 0.14164

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.072
ELB improved by 0.121634

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.97
ELB improved by 0.102385

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.885
ELB improved by 0.0845244

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.817
ELB improved by 0.0687627

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.761
ELB improved by 0.0555093

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.716
ELB improved by 0.0447916

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.68
ELB improved by 0.0363639

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.65
ELB improved by 0.0298533

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.625
ELB improved by 0.0248676

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.604
ELB improved by 0.0210541

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.586
ELB improved by 0.0181226

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.57
ELB improved by 0.0158464

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.556
ELB improved by 0.0140547

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.543
ELB improved by 0.0126217

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.532
ELB improved by 0.0114558

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.522
ELB improved by 0.010491

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.512
ELB improved by 0.00967945

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-883.741
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-569.275
ELB improved by 314.467

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-510.265
ELB improved by 59.0095

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.476
ELB improved by 34.7891

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.626
ELB improved by 14.8499

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.302
ELB improved by 7.32363

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.328
ELB improved by 5.97479

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.011
ELB improved by 6.31626

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.843
ELB improved by 7.16823

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.832
ELB improved by 8.01125

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.613
ELB improved by 8.21881

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.157
ELB improved by 7.45628

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.028
ELB improved by 6.12832

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399
ELB improved by 5.02874

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.56
ELB improved by 4.44002

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.94
ELB improved by 3.61978

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.556
ELB improved by 2.38379

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.032
ELB improved by 1.5243

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.011
ELB improved by 1.02036

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.281
ELB improved by 0.730227

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.723
ELB improved by 0.558334

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.272
ELB improved by 0.451139

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.891
ELB improved by 0.380591

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.559
ELB improved by 0.332002

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.262
ELB improved by 0.29735

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.99
ELB improved by 0.271979

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.737
ELB improved by 0.253011

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.498
ELB improved by 0.238586

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.271
ELB improved by 0.227463

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.052
ELB improved by 0.218804

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.84
ELB improved by 0.212042

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.633
ELB improved by 0.206794

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.43
ELB improved by 0.202798

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.23
ELB improved by 0.199866

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.033
ELB improved by 0.197847

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.836
ELB improved by 0.196599

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.64
ELB improved by 0.195964

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.444
ELB improved by 0.195755

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.248
ELB improved by 0.195742

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.053
ELB improved by 0.195656

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.858
ELB improved by 0.195189

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.664
ELB improved by 0.194019

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.472
ELB improved by 0.191828

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.283
ELB improved by 0.18834

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.1
ELB improved by 0.183351

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.923
ELB improved by 0.176767

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.755
ELB improved by 0.168614

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.596
ELB improved by 0.159044

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.447
ELB improved by 0.148316

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.311
ELB improved by 0.136765

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.186
ELB improved by 0.124761

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.073
ELB improved by 0.112672

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.972
ELB improved by 0.100833

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.883
ELB improved by 0.0895187

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.804
ELB improved by 0.0789357

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.735
ELB improved by 0.0692192

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.674
ELB improved by 0.0604386

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.622
ELB improved by 0.0526088

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.576
ELB improved by 0.0457034

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.536
ELB improved by 0.0396673

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.502
ELB improved by 0.0344286

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.472
ELB improved by 0.029907

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.446
ELB improved by 0.0260205

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.423
ELB improved by 0.02269

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.403
ELB improved by 0.0198415

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.386
ELB improved by 0.0174078

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.371
ELB improved by 0.0153289

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.357
ELB improved by 0.013552

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.345
ELB improved by 0.0120311

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.334
ELB improved by 0.0107264

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.325
ELB improved by 0.00960405

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
   2.32    0.18    3.34 

Example timings

graper.Rcheck/graper-Ex.timings

nameusersystemelapsed
coef.graper0.060.000.10
getPIPs0.080.000.07
graper0.070.030.11
makeExampleData0.000.020.02
makeExampleDataWithUnequalGroups0.020.000.02
plotELBO0.180.040.23
plotGroupPenalties0.990.051.03
plotPosterior0.500.020.53
predict.graper1.740.031.77
print.graper0.040.000.05