Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2024-05-04 11:39:18 -0400 (Sat, 04 May 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" | 4753 |
palomino3 | Windows Server 2022 Datacenter | x64 | 4.4.0 beta (2024-04-15 r86425 ucrt) -- "Puppy Cup" | 4486 |
lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.0 beta (2024-04-14 r86421) -- "Puppy Cup" | 4519 |
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" | 4479 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 908/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
graper 1.20.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | ![]() | ||||||||
palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | ![]() | ||||||||
lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | ![]() | ||||||||
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
kjohnson3 | macOS 13.6.5 Ventura / arm64 | see weekly results here | ||||||||||||
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: graper |
Version: 1.20.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.20.0.tar.gz |
StartedAt: 2024-05-03 22:21:22 -0400 (Fri, 03 May 2024) |
EndedAt: 2024-05-03 22:22:36 -0400 (Fri, 03 May 2024) |
EllapsedTime: 74.3 seconds |
RetCode: 0 |
Status: WARNINGS |
CheckDir: graper.Rcheck |
Warnings: 1 |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.20.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck’ * using R version 4.4.0 beta (2024-04-14 r86421) * using platform: x86_64-apple-darwin20 * R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 12.2.0 * running under: macOS Monterey 12.7.1 * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘graper/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘graper’ version ‘1.20.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘graper’ can be installed ... WARNING Found the following significant warnings: /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings] # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" See ‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00install.out’ for details. * used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ * used SDK: ‘MacOSX11.3.sdk’ * checking C++ specification ... NOTE Specified C++11: please drop specification unless essential * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... NOTE checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ? checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ? checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ? * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking compiled code ... NOTE Note: information on .o files is not available * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 1 WARNING, 3 NOTEs See ‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00check.log’ for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library’ * installing *source* package ‘graper’ ... ** using staged installation ** libs using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ using C++11 using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o In file included from fit_graper.cpp:4: In file included from ./graper_linear_dense_ff.h:2: In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/digamma.hpp:15: In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/math_fwd.hpp:29: In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11: /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings] # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" ^ 1 warning generated. clang++ -arch x86_64 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.4.0 beta (2024-04-14 r86421) -- "Puppy Cup" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-apple-darwin20 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(graper) > > test_check("graper") iteration 1 Updating parameters of variational distributions... Calculating ELB.. ELB=-838.677 ELB improved by inf iteration 2 Updating parameters of variational distributions... Calculating ELB.. ELB=-570.5 ELB improved by 268.177 iteration 3 Updating parameters of variational distributions... Calculating ELB.. ELB=-509.923 ELB improved by 60.5762 iteration 4 Updating parameters of variational distributions... Calculating ELB.. ELB=-470.892 ELB improved by 39.0309 iteration 5 Updating parameters of variational distributions... Calculating ELB.. ELB=-452.286 ELB improved by 18.6061 iteration 6 Updating parameters of variational distributions... Calculating ELB.. ELB=-443.375 ELB improved by 8.91141 iteration 7 Updating parameters of variational distributions... Calculating ELB.. ELB=-437.739 ELB improved by 5.63576 iteration 8 Updating parameters of variational distributions... Calculating ELB.. ELB=-432.948 ELB improved by 4.79141 iteration 9 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.24 ELB improved by 4.70794 iteration 10 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.641 ELB improved by 4.59862 iteration 11 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.557 ELB improved by 4.08402 iteration 12 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.355 ELB improved by 3.20227 iteration 13 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.07 ELB improved by 2.28485 iteration 14 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.487 ELB improved by 1.58353 iteration 15 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.36 ELB improved by 1.12635 iteration 16 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.518 ELB improved by 0.842608 iteration 17 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.85 ELB improved by 0.667814 iteration 18 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.287 ELB improved by 0.562537 iteration 19 Updating parameters of variational distributions... Calculating ELB.. ELB=-408.783 ELB improved by 0.503989 iteration 20 Updating parameters of variational distributions... Calculating ELB.. ELB=-408.304 ELB improved by 0.478886 iteration 21 Updating parameters of variational distributions... Calculating ELB.. ELB=-407.825 ELB improved by 0.479624 iteration 22 Updating parameters of variational distributions... Calculating ELB.. ELB=-407.324 ELB improved by 0.5011 iteration 23 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.786 ELB improved by 0.537522 iteration 24 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.204 ELB improved by 0.58221 iteration 25 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.572 ELB improved by 0.63209 iteration 26 Updating parameters of variational distributions... Calculating ELB.. ELB=-404.883 ELB improved by 0.688315 iteration 27 Updating parameters of variational distributions... Calculating ELB.. ELB=-404.135 ELB improved by 0.748436 iteration 28 Updating parameters of variational distributions... Calculating ELB.. ELB=-403.331 ELB improved by 0.803715 iteration 29 Updating parameters of variational distributions... Calculating ELB.. ELB=-402.48 ELB improved by 0.850984 iteration 30 Updating parameters of variational distributions... Calculating ELB.. ELB=-401.582 ELB improved by 0.898608 iteration 31 Updating parameters of variational distributions... Calculating ELB.. ELB=-400.626 ELB improved by 0.955953 iteration 32 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.597 ELB improved by 1.02833 iteration 33 Updating parameters of variational distributions... Calculating ELB.. ELB=-398.478 ELB improved by 1.11951 iteration 34 Updating parameters of variational distributions... Calculating ELB.. ELB=-397.244 ELB improved by 1.23411 iteration 35 Updating parameters of variational distributions... Calculating ELB.. ELB=-395.864 ELB improved by 1.38026 iteration 36 Updating parameters of variational distributions... Calculating ELB.. ELB=-394.3 ELB improved by 1.56399 iteration 37 Updating parameters of variational distributions... Calculating ELB.. ELB=-392.532 ELB improved by 1.76791 iteration 38 Updating parameters of variational distributions... Calculating ELB.. ELB=-390.524 ELB improved by 2.0076 iteration 39 Updating parameters of variational distributions... Calculating ELB.. ELB=-388.357 ELB improved by 2.16751 iteration 40 Updating parameters of variational distributions... Calculating ELB.. ELB=-386.543 ELB improved by 1.81387 iteration 41 Updating parameters of variational distributions... Calculating ELB.. ELB=-385.297 ELB improved by 1.2455 iteration 42 Updating parameters of variational distributions... Calculating ELB.. ELB=-384.457 ELB improved by 0.840104 iteration 43 Updating parameters of variational distributions... Calculating ELB.. ELB=-383.841 ELB improved by 0.61618 iteration 44 Updating parameters of variational distributions... Calculating ELB.. ELB=-383.334 ELB improved by 0.506919 iteration 45 Updating parameters of variational distributions... Calculating ELB.. ELB=-382.898 ELB improved by 0.435926 iteration 46 Updating parameters of variational distributions... Calculating ELB.. ELB=-382.551 ELB improved by 0.347152 iteration 47 Updating parameters of variational distributions... Calculating ELB.. ELB=-382.307 ELB improved by 0.24429 iteration 48 Updating parameters of variational distributions... Calculating ELB.. ELB=-382.144 ELB improved by 0.162641 iteration 49 Updating parameters of variational distributions... Calculating ELB.. ELB=-382.032 ELB improved by 0.111782 iteration 50 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.95 ELB improved by 0.0821079 iteration 51 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.886 ELB improved by 0.0640199 iteration 52 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.834 ELB improved by 0.0520693 iteration 53 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.79 ELB improved by 0.0435785 iteration 54 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.753 ELB improved by 0.0372177 iteration 55 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.721 ELB improved by 0.0322748 iteration 56 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.693 ELB improved by 0.0283341 iteration 57 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.667 ELB improved by 0.0251341 iteration 58 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.645 ELB improved by 0.0224999 iteration 59 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.625 ELB improved by 0.0203078 iteration 60 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.606 ELB improved by 0.0184664 iteration 61 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.589 ELB improved by 0.0169044 iteration 62 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.574 ELB improved by 0.0155641 iteration 63 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.559 ELB improved by 0.0143967 iteration 64 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.546 ELB improved by 0.0133604 iteration 65 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.534 ELB improved by 0.0124193 iteration 66 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.522 ELB improved by 0.0115441 iteration 67 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.511 ELB improved by 0.0107126 iteration 68 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.501 ELB improved by 0.0099111 ELB converged iteration 1 Updating parameters of variational distributions... Calculating ELB.. ELB=-891.049 ELB improved by inf iteration 2 Updating parameters of variational distributions... Calculating ELB.. ELB=-583.832 ELB improved by 307.217 iteration 3 Updating parameters of variational distributions... Calculating ELB.. ELB=-521.866 ELB improved by 61.9656 iteration 4 Updating parameters of variational distributions... Calculating ELB.. ELB=-480.475 ELB improved by 41.3908 iteration 5 Updating parameters of variational distributions... Calculating ELB.. ELB=-462.857 ELB improved by 17.6179 iteration 6 Updating parameters of variational distributions... Calculating ELB.. ELB=-456.356 ELB improved by 6.50155 iteration 7 Updating parameters of variational distributions... Calculating ELB.. ELB=-452.904 ELB improved by 3.45205 iteration 8 Updating parameters of variational distributions... Calculating ELB.. ELB=-450.378 ELB improved by 2.52601 iteration 9 Updating parameters of variational distributions... Calculating ELB.. ELB=-448.231 ELB improved by 2.14726 iteration 10 Updating parameters of variational distributions... Calculating ELB.. ELB=-446.265 ELB improved by 1.96515 iteration 11 Updating parameters of variational distributions... Calculating ELB.. ELB=-444.394 ELB improved by 1.87161 iteration 12 Updating parameters of variational distributions... Calculating ELB.. ELB=-442.562 ELB improved by 1.8318 iteration 13 Updating parameters of variational distributions... Calculating ELB.. ELB=-440.731 ELB improved by 1.83128 iteration 14 Updating parameters of variational distributions... Calculating ELB.. ELB=-438.877 ELB improved by 1.8542 iteration 15 Updating parameters of variational distributions... Calculating ELB.. ELB=-437.005 ELB improved by 1.87122 iteration 16 Updating parameters of variational distributions... Calculating ELB.. ELB=-435.168 ELB improved by 1.83766 iteration 17 Updating parameters of variational distributions... Calculating ELB.. ELB=-433.458 ELB improved by 1.70956 iteration 18 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.982 ELB improved by 1.47567 iteration 19 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.806 ELB improved by 1.17636 iteration 20 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.926 ELB improved by 0.879966 iteration 21 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.288 ELB improved by 0.638091 iteration 22 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.822 ELB improved by 0.465801 iteration 23 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.469 ELB improved by 0.35288 iteration 24 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.188 ELB improved by 0.281528 iteration 25 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.952 ELB improved by 0.235625 iteration 26 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.749 ELB improved by 0.202822 iteration 27 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.574 ELB improved by 0.174946 iteration 28 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.426 ELB improved by 0.148604 iteration 29 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.302 ELB improved by 0.124114 iteration 30 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.199 ELB improved by 0.102747 iteration 31 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.114 ELB improved by 0.0851053 iteration 32 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.043 ELB improved by 0.0710927 iteration 33 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.983 ELB improved by 0.0602527 iteration 34 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.931 ELB improved by 0.0519889 iteration 35 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.885 ELB improved by 0.0457084 iteration 36 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.844 ELB improved by 0.040903 iteration 37 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.807 ELB improved by 0.0371768 iteration 38 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.772 ELB improved by 0.0342371 iteration 39 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.741 ELB improved by 0.0318737 iteration 40 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.711 ELB improved by 0.0299374 iteration 41 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.682 ELB improved by 0.0283219 iteration 42 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.655 ELB improved by 0.0269514 iteration 43 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.63 ELB improved by 0.0257711 iteration 44 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.605 ELB improved by 0.0247406 iteration 45 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.581 ELB improved by 0.0238303 iteration 46 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.558 ELB improved by 0.0230174 iteration 47 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.536 ELB improved by 0.0222847 iteration 48 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.514 ELB improved by 0.0216186 iteration 49 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.493 ELB improved by 0.0210084 iteration 50 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.473 ELB improved by 0.0204453 iteration 51 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.453 ELB improved by 0.0199224 iteration 52 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.433 ELB improved by 0.0194336 iteration 53 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.414 ELB improved by 0.0189743 iteration 54 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.396 ELB improved by 0.0185403 iteration 55 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.378 ELB improved by 0.0181283 iteration 56 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.36 ELB improved by 0.0177356 iteration 57 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.343 ELB improved by 0.0173597 iteration 58 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.326 ELB improved by 0.0169989 iteration 59 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.309 ELB improved by 0.0166516 iteration 60 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.293 ELB improved by 0.0163168 iteration 61 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.277 ELB improved by 0.0159936 iteration 62 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.261 ELB improved by 0.0156815 iteration 63 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.246 ELB improved by 0.0153801 iteration 64 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.23 ELB improved by 0.0150894 iteration 65 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.216 ELB improved by 0.0148095 iteration 66 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.201 ELB improved by 0.0145408 iteration 67 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.187 ELB improved by 0.0142836 iteration 68 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.173 ELB improved by 0.0140387 iteration 69 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.159 ELB improved by 0.0138069 iteration 70 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.145 ELB improved by 0.0135891 iteration 71 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.132 ELB improved by 0.0133864 iteration 72 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.119 ELB improved by 0.0132001 iteration 73 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.106 ELB improved by 0.0130316 iteration 74 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.093 ELB improved by 0.0128826 iteration 75 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.08 ELB improved by 0.012755 iteration 76 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.068 ELB improved by 0.012651 iteration 77 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.055 ELB improved by 0.012573 iteration 78 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.042 ELB improved by 0.0125241 iteration 79 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.03 ELB improved by 0.0125078 iteration 80 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.017 ELB improved by 0.0125284 iteration 81 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.005 ELB improved by 0.0125909 iteration 82 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.992 ELB improved by 0.0127016 iteration 83 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.979 ELB improved by 0.0128682 iteration 84 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.966 ELB improved by 0.0131002 iteration 85 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.953 ELB improved by 0.0134096 iteration 86 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.939 ELB improved by 0.0138114 iteration 87 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.925 ELB improved by 0.0143247 iteration 88 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.91 ELB improved by 0.0149741 iteration 89 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.894 ELB improved by 0.0157914 iteration 90 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.877 ELB improved by 0.0168179 iteration 91 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.859 ELB improved by 0.0181074 iteration 92 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.839 ELB improved by 0.019731 iteration 93 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.817 ELB improved by 0.0217815 iteration 94 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.793 ELB improved by 0.02438 iteration 95 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.765 ELB improved by 0.027681 iteration 96 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.733 ELB improved by 0.0318744 iteration 97 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.696 ELB improved by 0.0371752 iteration 98 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.652 ELB improved by 0.0437905 iteration 99 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.601 ELB improved by 0.0518473 iteration 100 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.539 ELB improved by 0.0612865 iteration 101 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.468 ELB improved by 0.0717838 iteration 102 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.385 ELB improved by 0.0828371 iteration 103 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.291 ELB improved by 0.0941312 iteration 104 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.185 ELB improved by 0.106034 iteration 105 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.065 ELB improved by 0.119858 iteration 106 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.927 ELB improved by 0.137714 iteration 107 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.765 ELB improved by 0.162168 iteration 108 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.569 ELB improved by 0.195725 iteration 109 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.329 ELB improved by 0.239594 iteration 110 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.039 ELB improved by 0.290602 iteration 111 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.701 ELB improved by 0.337541 iteration 112 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.335 ELB improved by 0.366226 iteration 113 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.961 ELB improved by 0.37377 iteration 114 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.593 ELB improved by 0.367945 iteration 115 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.239 ELB improved by 0.354632 iteration 116 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.903 ELB improved by 0.335271 iteration 117 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.593 ELB improved by 0.310179 iteration 118 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.313 ELB improved by 0.280296 iteration 119 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.066 ELB improved by 0.247349 iteration 120 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.852 ELB improved by 0.213487 iteration 121 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.671 ELB improved by 0.180807 iteration 122 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.52 ELB improved by 0.150938 iteration 123 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.396 ELB improved by 0.124832 iteration 124 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.293 ELB improved by 0.102782 iteration 125 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.208 ELB improved by 0.0845993 iteration 126 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.138 ELB improved by 0.0698277 iteration 127 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.08 ELB improved by 0.0579208 iteration 128 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.032 ELB improved by 0.0483491 iteration 129 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.991 ELB improved by 0.0406507 iteration 130 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.957 ELB improved by 0.0344439 iteration 131 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.928 ELB improved by 0.0294212 iteration 132 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.902 ELB improved by 0.025337 iteration 133 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.88 ELB improved by 0.0219954 iteration 134 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.861 ELB improved by 0.0192398 iteration 135 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.844 ELB improved by 0.0169454 iteration 136 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.829 ELB improved by 0.0150137 iteration 137 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.816 ELB improved by 0.0133677 iteration 138 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.804 ELB improved by 0.0119485 iteration 139 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.793 ELB improved by 0.0107123 iteration 140 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.783 ELB improved by 0.0096266 ELB converged iteration 1 Updating parameters of variational distributions... Calculating ELB.. ELB=-853.138 ELB improved by inf iteration 2 Updating parameters of variational distributions... Calculating ELB.. ELB=-566.949 ELB improved by 286.189 iteration 3 Updating parameters of variational distributions... Calculating ELB.. ELB=-507.61 ELB improved by 59.3385 iteration 4 Updating parameters of variational distributions... Calculating ELB.. ELB=-470.969 ELB improved by 36.6415 iteration 5 Updating parameters of variational distributions... Calculating ELB.. ELB=-454.883 ELB improved by 16.0854 iteration 6 Updating parameters of variational distributions... Calculating ELB.. ELB=-448.324 ELB improved by 6.55921 iteration 7 Updating parameters of variational distributions... Calculating ELB.. ELB=-444.696 ELB improved by 3.62767 iteration 8 Updating parameters of variational distributions... Calculating ELB.. ELB=-442.009 ELB improved by 2.6871 iteration 9 Updating parameters of variational distributions... Calculating ELB.. ELB=-439.668 ELB improved by 2.34092 iteration 10 Updating parameters of variational distributions... Calculating ELB.. ELB=-437.481 ELB improved by 2.1874 iteration 11 Updating parameters of variational distributions... Calculating ELB.. ELB=-435.375 ELB improved by 2.10581 iteration 12 Updating parameters of variational distributions... Calculating ELB.. ELB=-433.313 ELB improved by 2.06188 iteration 13 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.281 ELB improved by 2.03212 iteration 14 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.299 ELB improved by 1.98245 iteration 15 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.433 ELB improved by 1.86612 iteration 16 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.788 ELB improved by 1.64423 iteration 17 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.464 ELB improved by 1.32404 iteration 18 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.492 ELB improved by 0.972089 iteration 19 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.824 ELB improved by 0.668129 iteration 20 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.373 ELB improved by 0.451119 iteration 21 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.058 ELB improved by 0.315073 iteration 22 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.822 ELB improved by 0.235794 iteration 23 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.631 ELB improved by 0.190832 iteration 24 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.466 ELB improved by 0.165198 iteration 25 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.316 ELB improved by 0.150257 iteration 26 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.174 ELB improved by 0.141376 iteration 27 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.038 ELB improved by 0.136139 iteration 28 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.905 ELB improved by 0.133294 iteration 29 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.773 ELB improved by 0.132182 iteration 30 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.64 ELB improved by 0.132449 iteration 31 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.506 ELB improved by 0.133908 iteration 32 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.37 ELB improved by 0.136464 iteration 33 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.23 ELB improved by 0.140093 iteration 34 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.085 ELB improved by 0.144823 iteration 35 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.934 ELB improved by 0.150742 iteration 36 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.776 ELB improved by 0.157999 iteration 37 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.609 ELB improved by 0.166811 iteration 38 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.432 ELB improved by 0.177476 iteration 39 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.242 ELB improved by 0.190376 iteration 40 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.036 ELB improved by 0.205979 iteration 41 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.811 ELB improved by 0.224828 iteration 42 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.563 ELB improved by 0.247514 iteration 43 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.289 ELB improved by 0.274603 iteration 44 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.982 ELB improved by 0.306521 iteration 45 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.639 ELB improved by 0.343348 iteration 46 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.254 ELB improved by 0.384541 iteration 47 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.826 ELB improved by 0.428612 iteration 48 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.353 ELB improved by 0.472879 iteration 49 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.839 ELB improved by 0.513501 iteration 50 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.293 ELB improved by 0.545976 iteration 51 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.727 ELB improved by 0.566192 iteration 52 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.155 ELB improved by 0.571724 iteration 53 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.593 ELB improved by 0.562781 iteration 54 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.051 ELB improved by 0.542043 iteration 55 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.538 ELB improved by 0.512882 iteration 56 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.062 ELB improved by 0.476132 iteration 57 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.633 ELB improved by 0.428321 iteration 58 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.266 ELB improved by 0.36744 iteration 59 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.965 ELB improved by 0.301077 iteration 60 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.724 ELB improved by 0.241034 iteration 61 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.531 ELB improved by 0.193041 iteration 62 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.374 ELB improved by 0.156332 iteration 63 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.246 ELB improved by 0.127951 iteration 64 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.141 ELB improved by 0.105406 iteration 65 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.054 ELB improved by 0.0872146 iteration 66 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.981 ELB improved by 0.0725433 iteration 67 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.92 ELB improved by 0.0608534 iteration 68 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.869 ELB improved by 0.0517406 iteration 69 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.824 ELB improved by 0.0448548 iteration 70 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.784 ELB improved by 0.0398353 iteration 71 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.748 ELB improved by 0.0362646 iteration 72 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.714 ELB improved by 0.033644 iteration 73 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.683 ELB improved by 0.0314108 iteration 74 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.654 ELB improved by 0.0290317 iteration 75 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.627 ELB improved by 0.0261765 iteration 76 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.605 ELB improved by 0.0228608 iteration 77 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.585 ELB improved by 0.0194045 iteration 78 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.569 ELB improved by 0.0162106 iteration 79 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.555 ELB improved by 0.0135479 iteration 80 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.544 ELB improved by 0.0114866 iteration 81 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.534 ELB improved by 0.00995883 ELB converged iteration 1 Updating parameters of variational distributions... Calculating ELB.. ELB=-893.1 ELB improved by inf iteration 2 Updating parameters of variational distributions... Calculating ELB.. ELB=-579.212 ELB improved by 313.887 iteration 3 Updating parameters of variational distributions... Calculating ELB.. ELB=-519.082 ELB improved by 60.1305 iteration 4 Updating parameters of variational distributions... Calculating ELB.. ELB=-481.622 ELB improved by 37.4598 iteration 5 Updating parameters of variational distributions... Calculating ELB.. ELB=-465.666 ELB improved by 15.9562 iteration 6 Updating parameters of variational distributions... Calculating ELB.. ELB=-458.727 ELB improved by 6.93919 iteration 7 Updating parameters of variational distributions... Calculating ELB.. ELB=-454.159 ELB improved by 4.5675 iteration 8 Updating parameters of variational distributions... Calculating ELB.. ELB=-450.19 ELB improved by 3.96912 iteration 9 Updating parameters of variational distributions... Calculating ELB.. ELB=-446.373 ELB improved by 3.81663 iteration 10 Updating parameters of variational distributions... Calculating ELB.. ELB=-442.563 ELB improved by 3.80994 iteration 11 Updating parameters of variational distributions... Calculating ELB.. ELB=-438.734 ELB improved by 3.82948 iteration 12 Updating parameters of variational distributions... Calculating ELB.. ELB=-434.975 ELB improved by 3.75873 iteration 13 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.496 ELB improved by 3.47957 iteration 14 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.545 ELB improved by 2.95057 iteration 15 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.277 ELB improved by 2.26772 iteration 16 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.666 ELB improved by 1.61127 iteration 17 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.554 ELB improved by 1.11225 iteration 18 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.768 ELB improved by 0.785724 iteration 19 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.186 ELB improved by 0.582466 iteration 20 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.734 ELB improved by 0.452166 iteration 21 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.37 ELB improved by 0.363515 iteration 22 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.07 ELB improved by 0.299949 iteration 23 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.818 ELB improved by 0.252552 iteration 24 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.601 ELB improved by 0.216092 iteration 25 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.414 ELB improved by 0.187295 iteration 26 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.25 ELB improved by 0.164034 iteration 27 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.105 ELB improved by 0.14489 iteration 28 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.976 ELB improved by 0.128899 iteration 29 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.861 ELB improved by 0.115392 iteration 30 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.757 ELB improved by 0.103896 iteration 31 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.663 ELB improved by 0.0940661 iteration 32 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.577 ELB improved by 0.0856381 iteration 33 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.499 ELB improved by 0.0783981 iteration 34 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.427 ELB improved by 0.0721646 iteration 35 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.36 ELB improved by 0.06678 iteration 36 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.298 ELB improved by 0.0621075 iteration 37 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.24 ELB improved by 0.0580297 iteration 38 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.185 ELB improved by 0.0544472 iteration 39 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.134 ELB improved by 0.0512769 iteration 40 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.086 ELB improved by 0.0484503 iteration 41 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.04 ELB improved by 0.0459109 iteration 42 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.996 ELB improved by 0.0436126 iteration 43 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.955 ELB improved by 0.0415173 iteration 44 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.915 ELB improved by 0.0395939 iteration 45 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.877 ELB improved by 0.0378167 iteration 46 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.841 ELB improved by 0.0361644 iteration 47 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.806 ELB improved by 0.0346195 iteration 48 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.773 ELB improved by 0.0331676 iteration 49 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.741 ELB improved by 0.0317969 iteration 50 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.711 ELB improved by 0.0304975 iteration 51 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.682 ELB improved by 0.0292616 iteration 52 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.654 ELB improved by 0.0280828 iteration 53 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.627 ELB improved by 0.0269558 iteration 54 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.601 ELB improved by 0.0258767 iteration 55 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.576 ELB improved by 0.0248419 iteration 56 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.552 ELB improved by 0.0238488 iteration 57 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.529 ELB improved by 0.0228951 iteration 58 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.507 ELB improved by 0.0219788 iteration 59 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.486 ELB improved by 0.0210982 iteration 60 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.466 ELB improved by 0.0202517 iteration 61 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.446 ELB improved by 0.0194375 iteration 62 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.428 ELB improved by 0.0186543 iteration 63 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.41 ELB improved by 0.0179004 iteration 64 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.393 ELB improved by 0.0171742 iteration 65 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.376 ELB improved by 0.0164742 iteration 66 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.36 ELB improved by 0.015799 iteration 67 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.345 ELB improved by 0.0151472 iteration 68 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.331 ELB improved by 0.0145177 iteration 69 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.317 ELB improved by 0.0139094 iteration 70 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.304 ELB improved by 0.0133216 iteration 71 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.291 ELB improved by 0.0127537 iteration 72 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.279 ELB improved by 0.0122054 iteration 73 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.267 ELB improved by 0.0116764 iteration 74 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.256 ELB improved by 0.0111667 iteration 75 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.245 ELB improved by 0.0106764 iteration 76 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.235 ELB improved by 0.0102053 iteration 77 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.225 ELB improved by 0.00975367 ELB converged [ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ] > > proc.time() user system elapsed 2.733 0.302 3.074
graper.Rcheck/graper-Ex.timings
name | user | system | elapsed | |
coef.graper | 0.054 | 0.019 | 0.074 | |
getPIPs | 0.051 | 0.015 | 0.067 | |
graper | 0.087 | 0.023 | 0.111 | |
makeExampleData | 0.013 | 0.002 | 0.015 | |
makeExampleDataWithUnequalGroups | 0.031 | 0.003 | 0.034 | |
plotELBO | 0.237 | 0.022 | 0.261 | |
plotGroupPenalties | 0.830 | 0.032 | 0.870 | |
plotPosterior | 0.656 | 0.026 | 0.691 | |
predict.graper | 2.132 | 0.115 | 2.286 | |
print.graper | 0.051 | 0.013 | 0.066 | |