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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL qckitfastq
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library’
* installing *source* package ‘qckitfastq’ ...
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
using C++14
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RSeqAn/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RSeqAn/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c calc_adapter_content.cpp -o calc_adapter_content.o
In file included from calc_adapter_content.cpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RSeqAn/include/seqan/find.h:44:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RSeqAn/include/seqan/modifier.h:48:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RSeqAn/include/seqan/parallel.h:92:
/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RSeqAn/include/seqan/parallel/parallel_resource_pool.h:69:18: warning: variable 'count' set but not used [-Wunused-but-set-variable]
        unsigned count = 0;
                 ^
In file included from calc_adapter_content.cpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RSeqAn/include/seqan/find.h:45:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RSeqAn/include/seqan/score.h:48:
/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RSeqAn/include/seqan/score/score_matrix_io.h:125:19: warning: variable 'row' set but not used [-Wunused-but-set-variable]
    for (unsigned row = 0; !atEnd(reader); ++row)
                  ^
In file included from calc_adapter_content.cpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RSeqAn/include/seqan/find.h:73:
/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RSeqAn/include/seqan/find/find_wild_shiftand.h:160:11: warning: variable 'len' set but not used [-Wunused-but-set-variable]
    TWord len = nl;
          ^
3 warnings generated.
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RSeqAn/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c gzstream.cpp -o gzstream.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RSeqAn/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c read_fastq.cpp -o read_fastq.o
read_fastq.cpp:30:32: warning: unused variable 'it' [-Wunused-variable]
    std::vector<int>::iterator it;
                               ^
read_fastq.cpp:158:36: warning: unused variable 'qual_by_col_it' [-Wunused-variable]
    std::vector<uint8_t>::iterator qual_by_col_it;
                                   ^
2 warnings generated.
clang++ -arch arm64 -std=gnu++14 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o qckitfastq.so RcppExports.o calc_adapter_content.o gzstream.o read_fastq.o -lz -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/00LOCK-qckitfastq/00new/qckitfastq/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (qckitfastq)