############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data scater ### ############################################################################## ############################################################################## * checking for file ‘scater/DESCRIPTION’ ... OK * preparing ‘scater’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘overview.Rmd’ using rmarkdown 2024-04-17 01:47:07.434 R[85689:450361192] XType: Using static font registry. Quitting from lines 195-197 [unnamed-chunk-7] (overview.Rmd) Error: processing vignette 'overview.Rmd' failed with diagnostics: function 'as_cholmod_sparse' not provided by package 'Matrix' --- failed re-building ‘overview.Rmd’ SUMMARY: processing the following file failed: ‘overview.Rmd’ Error: Vignette re-building failed. Execution halted