############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data BiocSingular ### ############################################################################## ############################################################################## * checking for file ‘BiocSingular/DESCRIPTION’ ... OK * preparing ‘BiocSingular’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘decomposition.Rmd’ using rmarkdown --- finished re-building ‘decomposition.Rmd’ --- re-building ‘representations.Rmd’ using rmarkdown Quitting from lines 45-50 [unnamed-chunk-2] (representations.Rmd) Error: processing vignette 'representations.Rmd' failed with diagnostics: function 'as_cholmod_sparse' not provided by package 'Matrix' --- failed re-building ‘representations.Rmd’ SUMMARY: processing the following file failed: ‘representations.Rmd’ Error: Vignette re-building failed. Execution halted