Back to Multiple platform build/check report for BioC 3.18:   simplified   long
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This page was generated on 2023-11-30 11:37:58 -0500 (Thu, 30 Nov 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.2 LTS)x86_644.3.2 Patched (2023-11-13 r85521) -- "Eye Holes" 4685
palomino4Windows Server 2022 Datacenterx644.3.2 (2023-10-31 ucrt) -- "Eye Holes" 4420
lconwaymacOS 12.7.1 Montereyx86_644.3.2 Patched (2023-11-01 r85457) -- "Eye Holes" 4439
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1612/2266HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
puma 3.44.0  (landing page)
Xuejun Liu
Snapshot Date: 2023-11-29 14:05:05 -0500 (Wed, 29 Nov 2023)
git_url: https://git.bioconductor.org/packages/puma
git_branch: RELEASE_3_18
git_last_commit: 77047b5
git_last_commit_date: 2023-10-24 09:38:31 -0500 (Tue, 24 Oct 2023)
nebbiolo2Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here

CHECK results for puma on lconway


To the developers/maintainers of the puma package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/puma.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: puma
Version: 3.44.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:puma.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings puma_3.44.0.tar.gz
StartedAt: 2023-11-29 22:12:57 -0500 (Wed, 29 Nov 2023)
EndedAt: 2023-11-29 22:18:46 -0500 (Wed, 29 Nov 2023)
EllapsedTime: 349.2 seconds
RetCode: 0
Status:   WARNINGS  
CheckDir: puma.Rcheck
Warnings: 1

Command output

##############################################################################
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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:puma.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings puma_3.44.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.18-bioc/meat/puma.Rcheck’
* using R version 4.3.2 Patched (2023-11-01 r85457)
* using platform: x86_64-apple-darwin20 (64-bit)
* R was compiled by
    Apple clang version 14.0.3 (clang-1403.0.22.14.1)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Monterey 12.7.1
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘puma/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘puma’ version ‘3.44.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘puma’ can be installed ... WARNING
Found the following significant warnings:
  pumaclust_c.c:181:24: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
See ‘/Users/biocbuild/bbs-3.18-bioc/meat/puma.Rcheck/00install.out’ for details.
* used C compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Package listed in more than one of Depends, Imports, Suggests, Enhances:
  ‘oligoClasses’
A package should be listed in only one of these fields.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
  ‘ROCR’ ‘limma’ ‘pumadata’ ‘snow’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
':::' calls which should be '::':
  ‘affy:::mm’ ‘affy:::pm’ ‘affy:::probeNames’ ‘oligo:::mm’ ‘oligo:::pm’
  ‘oligo:::probeNames’ ‘oligo:::rma’
  See the note in ?`:::` about the use of this operator.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
PMmmgmos: no visible binding for global variable ‘median’
PMmmgmos: no visible global function definition for ‘description’
calcAUC: no visible global function definition for ‘prediction’
calcAUC: no visible global function definition for ‘performance’
calculateLimma: no visible global function definition for ‘lmFit’
calculateLimma: no visible global function definition for
  ‘contrasts.fit’
calculateLimma: no visible global function definition for ‘eBayes’
calculateTtest : <anonymous>: no visible global function definition for
  ‘t.test’
clusterApplyLBDots : submit: no visible global function definition for
  ‘sendCall’
clusterApplyLBDots: no visible global function definition for
  ‘recvOneResult’
clusterNormE: no visible global function definition for ‘var’
clusterNormVar: no visible global function definition for ‘var’
compareLimmapumaDE: no visible global function definition for ‘pdf’
compareLimmapumaDE: no visible global function definition for ‘dev.off’
compareLimmapumaDE: no visible global function definition for ‘par’
compareLimmapumaDE: no visible global function definition for
  ‘vennDiagram’
createDesignMatrix: no visible global function definition for
  ‘model.matrix’
erfc: no visible global function definition for ‘pnorm’
gmhta: no visible global function definition for ‘clusterEvalQ’
gmhta: no visible global function definition for ‘data’
gmhta: no visible global function definition for ‘clusterApplyLB’
gmhta: no visible global function definition for ‘stopCluster’
gmhta: no visible binding for global variable ‘median’
gmoExon: no visible global function definition for ‘clusterEvalQ’
gmoExon: no visible global function definition for ‘data’
gmoExon: no visible global function definition for ‘clusterApplyLB’
gmoExon: no visible global function definition for ‘stopCluster’
gmoExon: no visible binding for global variable ‘median’
igmoExon: no visible global function definition for ‘clusterEvalQ’
igmoExon: no visible global function definition for ‘read.table’
igmoExon: no visible global function definition for ‘data’
igmoExon: no visible global function definition for ‘clusterApplyLB’
igmoExon: no visible global function definition for ‘stopCluster’
igmoExon: no visible binding for global variable ‘median’
just.mgmos: no visible binding for global variable ‘median’
just.mmgmos: no visible binding for global variable ‘median’
legend2: no visible global function definition for ‘par’
legend2: no visible global function definition for ‘xy.coords’
legend2 : rect2: no visible global function definition for ‘rect’
legend2 : segments2: no visible global function definition for
  ‘segments’
legend2 : points2: no visible global function definition for ‘points’
legend2 : text2: no visible global function definition for ‘text’
legend2: no visible global function definition for ‘strwidth’
legend2: no visible global function definition for ‘xinch’
legend2: no visible global function definition for ‘yinch’
legend2: no visible global function definition for ‘strheight’
matrixDistance: no visible global function definition for ‘dist’
mgmos: no visible binding for global variable ‘median’
mmgmos: no visible binding for global variable ‘median’
plot.pumaPCARes: no visible global function definition for ‘text’
plot.pumaPCARes: no visible global function definition for ‘legend’
plotErrorBars: no visible global function definition for ‘qnorm’
plotErrorBars: no visible global function definition for ‘par’
plotErrorBars: no visible global function definition for ‘even’
plotErrorBars: no visible global function definition for ‘odd’
plotErrorBars: no visible global function definition for ‘arrows’
plotErrorBars: no visible global function definition for ‘points’
plotErrorBars: no visible global function definition for ‘axis’
plotErrorBars: no visible global function definition for ‘title’
plotHistTwoClasses: no visible global function definition for ‘axis’
plotHistTwoClasses: no visible global function definition for ‘box’
plotROC: no visible global function definition for ‘prediction’
plotROC: no visible global function definition for ‘performance’
plotWhiskers: no visible global function definition for ‘segments’
plotWhiskers: no visible global function definition for ‘qnorm’
plotWhiskers: no visible global function definition for ‘points’
plotWhiskers: no visible global function definition for ‘abline’
pumaClust: no visible global function definition for ‘read.csv’
pumaClust: no visible global function definition for ‘kmeans’
pumaClust: no visible global function definition for ‘cov’
pumaClustii: no visible global function definition for ‘read.csv’
pumaClustii: no visible global function definition for ‘cov’
pumaComb: no visible global function definition for ‘getMPIcluster’
pumaComb: no visible global function definition for ‘makeCluster’
pumaComb: no visible global function definition for ‘clusterEvalQ’
pumaComb: no visible global function definition for ‘clusterApplyLB’
pumaCombImproved: no visible global function definition for
  ‘getMPIcluster’
pumaCombImproved: no visible global function definition for
  ‘makeCluster’
pumaCombImproved: no visible global function definition for
  ‘clusterEvalQ’
pumaCombImproved: no visible global function definition for
  ‘clusterApplyLB’
pumaFull: no visible global function definition for ‘pdf’
pumaFull: no visible global function definition for ‘par’
pumaFull: no visible global function definition for ‘prcomp’
pumaFull: no visible global function definition for ‘dev.off’
pumaNormalize: no visible binding for global variable ‘median’
pumaPCA: no visible global function definition for ‘prcomp’
pumaPCA: no visible global function definition for ‘rnorm’
pumaPCA: no visible global function definition for ‘optimise’
pumaPCA: no visible global function definition for ‘optim’
pumaPCA: no visible global function definition for ‘par’
pumaPCARemoveRedundancy: no visible global function definition for
  ‘dist’
write.reslts,DEResult: no visible global function definition for
  ‘write.table’
write.reslts,ExpressionSet: no visible global function definition for
  ‘write.table’
write.reslts,exprReslt: no visible global function definition for
  ‘write.table’
write.reslts,pumaPCARes: no visible global function definition for
  ‘write.table’
Undefined global functions or variables:
  abline arrows axis box clusterApplyLB clusterEvalQ contrasts.fit cov
  data description dev.off dist eBayes even getMPIcluster kmeans legend
  lmFit makeCluster median model.matrix odd optim optimise par pdf
  performance pnorm points prcomp prediction qnorm read.csv read.table
  rect recvOneResult rnorm segments sendCall stopCluster strheight
  strwidth t.test text title var vennDiagram write.table xinch
  xy.coords yinch
Consider adding
  importFrom("grDevices", "dev.off", "pdf", "xy.coords")
  importFrom("graphics", "abline", "arrows", "axis", "box", "legend",
             "par", "points", "rect", "segments", "strheight",
             "strwidth", "text", "title", "xinch", "yinch")
  importFrom("stats", "cov", "dist", "kmeans", "median", "model.matrix",
             "optim", "optimise", "pnorm", "prcomp", "qnorm", "rnorm",
             "t.test", "var")
  importFrom("utils", "data", "read.csv", "read.table", "write.table")
to your NAMESPACE file.
* checking Rd files ... NOTE
checkRd: (-1) DEResult-class.Rd:92: Escaped LaTeX specials: \_
checkRd: (-1) DEResult-class.Rd:93: Escaped LaTeX specials: \_
checkRd: (-1) PMmmgmos.Rd:26: Escaped LaTeX specials: \_
checkRd: (-1) PMmmgmos.Rd:37: Escaped LaTeX specials: \_
checkRd: (-1) createContrastMatrix.Rd:20: Escaped LaTeX specials: \&
checkRd: (-1) exprReslt-class.Rd:100: Escaped LaTeX specials: \_
checkRd: (-1) exprReslt-class.Rd:101: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) exprReslt-class.Rd:102: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) gmhta.Rd:26: Escaped LaTeX specials: \_
checkRd: (-1) gmoExon.Rd:28: Escaped LaTeX specials: \_
checkRd: (-1) hcomb.Rd:22: Escaped LaTeX specials: \_
checkRd: (-1) hcomb.Rd:23: Escaped LaTeX specials: \_
checkRd: (-1) igmoExon.Rd:28: Escaped LaTeX specials: \_
checkRd: (-1) justmgMOS.Rd:41: Escaped LaTeX specials: \_ \_
checkRd: (-1) justmmgMOS.Rd:41: Escaped LaTeX specials: \_ \_
checkRd: (-1) legend2.Rd:134: Escaped LaTeX specials: \&
checkRd: (-1) mgmos.Rd:25: Escaped LaTeX specials: \_ \_
checkRd: (-1) mgmos.Rd:35: Escaped LaTeX specials: \_
checkRd: (-1) mmgmos.Rd:26: Escaped LaTeX specials: \_ \_
checkRd: (-1) mmgmos.Rd:37: Escaped LaTeX specials: \_
checkRd: (-1) mmgmos.Rd:38: Escaped LaTeX specials: \_
checkRd: (-1) pumaFull.Rd:23: Escaped LaTeX specials: \_ \_
checkRd: (-1) pumaFull.Rd:24: Escaped LaTeX specials: \_
checkRd: (-1) pumaFull.Rd:25: Escaped LaTeX specials: \_ \_ \_
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking sizes of PDF files under ‘inst/doc’ ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
puma-package     40.874  1.694  42.906
pumaDE           27.825  1.111  29.157
pumaCombImproved 17.630  1.126  18.973
pumaComb         11.773  0.306  12.176
plot-methods      5.400  0.383   5.827
pumaPCA           4.696  0.314   5.040
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 5 NOTEs
See
  ‘/Users/biocbuild/bbs-3.18-bioc/meat/puma.Rcheck/00check.log’
for details.



Installation output

puma.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL puma
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library’
* installing *source* package ‘puma’ ...
** using staged installation
** libs
using C compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using SDK: ‘MacOSX11.3.sdk’
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c PMmultimgmos.c -o PMmultimgmos.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c cregistration.c -o cregistration.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c donlp2.c -o donlp2.o
donlp2.c:471:33: warning: variable 'infiny' set but not used [-Wunused-but-set-variable]
    static DDOUBLE   tol1,term, infiny;
                                ^
donlp2.c:2034:1: warning: '/*' within block comment [-Wcomment]
/* **************************************************************************** */
^
donlp2.c:2707:1: warning: '/*' within block comment [-Wcomment]
/* inactive  
^
donlp2.c:2079:44: warning: variable 'iumin' set but not used [-Wunused-but-set-variable]
    static DDOUBLE   delsig,delx,sum,term, iumin;
                                           ^
4 warnings generated.
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c gme.c -o gme.o
gme.c:266:9: warning: variable 'fstart' set but not used [-Wunused-but-set-variable]
        double fstart;
               ^
1 warning generated.
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c ipplr_c.c -o ipplr_c.o
ipplr_c.c:255:118: warning: '&&' within '||' [-Wlogical-op-parentheses]
                   while((fmaxn_ipplr(diff_mu1,in_param.conds)>in_param.eps)||(fmaxn_ipplr(diff_lamda,in_param.conds)>in_param.eps)&& (n<2000))
                                                                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
ipplr_c.c:255:118: note: place parentheses around the '&&' expression to silence this warning
                   while((fmaxn_ipplr(diff_mu1,in_param.conds)>in_param.eps)||(fmaxn_ipplr(diff_lamda,in_param.conds)>in_param.eps)&& (n<2000))
                                                                                                                                   ^
                                                                              (                                                               )
1 warning generated.
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c multimgmos.c -o multimgmos.o
multimgmos.c:893:95: warning: suggest braces around initialization of subobject [-Wmissing-braces]
        double alphaii[MAX_NUM_COND]={0.0}, s1[MAX_NUM_COND]={0.0}, s2[MAX_NUM_PROBE][MAX_NUM_COND]={0.0}, c, d_mmgmos, t1, s3, s4;
                                                                                                     ^~~
                                                                                                     {  }
1 warning generated.
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c newx.c -o newx.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c pplr_c.c -o pplr_c.o
pplr_c.c:185:65: warning: unused variable 'x_temp' [-Wunused-variable]
        double exp_c[MAX_NUM_REPLICATE], var_c[MAX_NUM_REPLICATE], x_temp[MAX_NUM_COND];
                                                                   ^
1 warning generated.
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c pumaclust_c.c -o pumaclust_c.o
pumaclust_c.c:181:24: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
        while (foptold-fopt > abs(in_param.eps*fopt))
                              ^
pumaclust_c.c:181:24: note: use function 'fabs' instead
        while (foptold-fopt > abs(in_param.eps*fopt))
                              ^~~
                              fabs
1 warning generated.
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c pumaclustii_c.c -o pumaclustii_c.o
pumaclustii_c.c:255:42: warning: variable 'temp2' set but not used [-Wunused-but-set-variable]
        double  *exprs=NULL, *vars=NULL, temp, *temp2, temp3, **t3=NULL, *t4=NULL;
                                                ^
1 warning generated.
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c user_eval.c -o user_eval.o
clang -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o puma.so PMmultimgmos.o cregistration.o donlp2.o gme.o ipplr_c.o multimgmos.o newx.o pplr_c.o pumaclust_c.o pumaclustii_c.o user_eval.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/00LOCK-puma/00new/puma/libs
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (puma)

Tests output


Example timings

puma.Rcheck/puma-Ex.timings

nameusersystemelapsed
DEResult-class0.0020.0010.002
PMmmgmos0.0000.0010.000
bcomb000
calcAUC000
calculateFC000
calculateLimma000
calculateTtest000
clusterNormE0.0000.0000.001
clusterNormVar0.0000.0000.001
createContrastMatrix0.0210.0010.023
createDesignMatrix0.0310.0030.034
erfc000
exprReslt-class0.0000.0000.001
gmhta000
gmoExon000
hcomb0.0000.0000.001
igmoExon0.0000.0010.001
legend20.0010.0000.001
license.puma0.0010.0010.003
matrixDistance000
mgmos0.0010.0000.000
mmgmos0.0000.0000.001
normalisation.gs0.0000.0000.001
numFP0.0010.0000.001
numOfFactorsToUse000
numTP0.0000.0000.001
orig_pplr0.0000.0010.001
plot-methods5.4000.3835.827
plotErrorBars0.3180.0080.329
plotHistTwoClasses0.0070.0010.009
plotROC0.0000.0000.001
pplr0.1960.0270.230
puma-package40.874 1.69442.906
pumaClustii2.2110.0332.260
pumaComb11.773 0.30612.176
pumaCombImproved17.630 1.12618.973
pumaDE27.825 1.11129.157
pumaFull0.0010.0000.001
pumaNormalize0.3310.0120.346
pumaPCA4.6960.3145.040
pumaclust2.7880.0272.829
removeUninformativeFactors0.030.000.03