############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R-4.3.1/bin/R CMD build --keep-empty-dirs --no-resave-data SpliceWiz ### ############################################################################## ############################################################################## * checking for file ‘SpliceWiz/DESCRIPTION’ ... OK * preparing ‘SpliceWiz’: * checking DESCRIPTION meta-information ... OK * cleaning src * running ‘cleanup’ * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘SW_Cookbook.Rmd’ using rmarkdown which: no STAR in (/home/biocbuild/R/R-4.3.1/bin:/home/biocbuild/.local/bin:/home/biocbuild/bin:/usr/local/ensembl-vep:/usr/share/Modules/bin:/home/biocbuild/bin:/usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/usr/lib64/openmpi/bin:/home/biocbuild/libudunits-2/bin:/home/biocbuild/.dotnet:/home/biocbuild/openbabel-3.1.1/bin:/usr/lib64/openmpi/bin:/home/biocbuild/libudunits-2/bin:/home/biocbuild/.dotnet:/home/biocbuild/openbabel-3.1.1/bin) which: no STAR in (/home/biocbuild/R/R-4.3.1/bin:/home/biocbuild/.local/bin:/home/biocbuild/bin:/usr/local/ensembl-vep:/usr/share/Modules/bin:/home/biocbuild/bin:/usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/usr/lib64/openmpi/bin:/home/biocbuild/libudunits-2/bin:/home/biocbuild/.dotnet:/home/biocbuild/openbabel-3.1.1/bin:/usr/lib64/openmpi/bin:/home/biocbuild/libudunits-2/bin:/home/biocbuild/.dotnet:/home/biocbuild/openbabel-3.1.1/bin) --- finished re-building ‘SW_Cookbook.Rmd’ --- re-building ‘SW_QuickStart.Rmd’ using rmarkdown