############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R-4.3.1/bin/R CMD build --keep-empty-dirs --no-resave-data ReactomeGSA ### ############################################################################## ############################################################################## * checking for file ‘ReactomeGSA/DESCRIPTION’ ... OK * preparing ‘ReactomeGSA’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘analysing-scRNAseq.Rmd’ using rmarkdown Quitting from lines 58-62 [unnamed-chunk-2] (analysing-scRNAseq.Rmd) Error: processing vignette 'analysing-scRNAseq.Rmd' failed with diagnostics: there is no package called 'ReactomeGSA.data' --- failed re-building ‘analysing-scRNAseq.Rmd’ --- re-building ‘using-reactomegsa.Rmd’ using rmarkdown Quitting from lines 111-113 [add_dataset] (using-reactomegsa.Rmd) Error: processing vignette 'using-reactomegsa.Rmd' failed with diagnostics: there is no package called 'ReactomeGSA.data' --- failed re-building ‘using-reactomegsa.Rmd’ SUMMARY: processing the following files failed: ‘analysing-scRNAseq.Rmd’ ‘using-reactomegsa.Rmd’ Error: Vignette re-building failed. Execution halted