############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r BiocOncoTK -R && F:\biocbuild\bbs-3.18-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data BiocOncoTK ### ############################################################################## ############################################################################## * checking for file 'BiocOncoTK/DESCRIPTION' ... OK * preparing 'BiocOncoTK': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'BiocOncoTK.Rmd' using rmarkdown Quitting from lines at lines 693-698 [lkdar] (BiocOncoTK.Rmd) Error: processing vignette 'BiocOncoTK.Rmd' failed with diagnostics: Timeout was reached: [hsdsdev.bioconductor.org] Failed to connect to hsdsdev.bioconductor.org port 443 after 10006 ms: Timeout was reached --- failed re-building 'BiocOncoTK.Rmd' --- re-building 'curatedMSIData.Rmd' using rmarkdown --- finished re-building 'curatedMSIData.Rmd' --- re-building 'maptcga.Rmd' using rmarkdown --- finished re-building 'maptcga.Rmd' SUMMARY: processing the following file failed: 'BiocOncoTK.Rmd' Error: Vignette re-building failed. Execution halted