############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf gaggle.buildbin-libdir && mkdir gaggle.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh gaggle_1.68.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R gaggle.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=gaggle.buildbin-libdir gaggle_1.68.0.tar.gz' >>>>>>> * installing *source* package ‘gaggle’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location onLoad -- libname: /Users/biocbuild/bbs-3.17-bioc-mac-arm64/meat/gaggle.buildbin-libdir/00LOCK-gaggle/00new pkgname: gaggle path to jar: /Users/biocbuild/bbs-3.17-bioc-mac-arm64/meat/gaggle.buildbin-libdir/00LOCK-gaggle/00new/gaggle/jars/gaggleRShell.jar script: gaggle.R $Revision: 4499 $ $Date: 2010-08-10 17:15:03 -0700 (Tue, 10 Aug 2010) $ os version: Mac OS X jvm version: 18.0.1.1 You are using the wrong version of Java. Please see http://gaggle.systemsbiology.org/docs/html/java ** testing if installed package can be loaded from final location onLoad -- libname: /Users/biocbuild/bbs-3.17-bioc-mac-arm64/meat/gaggle.buildbin-libdir pkgname: gaggle path to jar: /Users/biocbuild/bbs-3.17-bioc-mac-arm64/meat/gaggle.buildbin-libdir/gaggle/jars/gaggleRShell.jar script: gaggle.R $Revision: 4499 $ $Date: 2010-08-10 17:15:03 -0700 (Tue, 10 Aug 2010) $ os version: Mac OS X jvm version: 18.0.1.1 You are using the wrong version of Java. Please see http://gaggle.systemsbiology.org/docs/html/java ** testing if installed package keeps a record of temporary installation path * DONE (gaggle)