############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf scMET.buildbin-libdir && mkdir scMET.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=scMET.buildbin-libdir scMET_1.2.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'scMET' ... ** using staged installation ** libs using C++ compiler: 'G__~1.EXE (GCC) 12.2.0' using C++17 g++ -std=gnu++17 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"../inst/include" -I"F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DRCPP_PARALLEL_USE_TBB=1 -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'F:/biocbuild/bbs-3.17-bioc/R/library/BH/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/RcppParallel/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include' -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -I"F:/biocbuild/bbs-3.17-bioc/R/library/RcppParallel/include" -D_REENTRANT -DSTAN_THREADS -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o In file included from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/Core:397, from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument '__m128' [-Wignored-attributes] 60 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument '__m128d' [-Wignored-attributes] 62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 161 | template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 162 | template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 163 | template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 718 | struct palign_impl | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 741 | struct palign_impl | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 764 | struct palign_impl | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 778 | ptranspose(PacketBlock& kernel) { | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 783 | ptranspose(PacketBlock& kernel) { | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 790 | ptranspose(PacketBlock& kernel) { | ^ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/Core:377: F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/Core:370: F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__m128'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/Core:439: F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37, from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/Sparse:26, from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31: F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) long long int>::half' {aka '__m128i'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] g++ -std=gnu++17 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"../inst/include" -I"F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DRCPP_PARALLEL_USE_TBB=1 -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'F:/biocbuild/bbs-3.17-bioc/R/library/BH/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/RcppParallel/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include' -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -I"F:/biocbuild/bbs-3.17-bioc/R/library/RcppParallel/include" -D_REENTRANT -DSTAN_THREADS -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c stanExports_scmet.cc -o stanExports_scmet.o In file included from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/Core:397, from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22, from F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/rstaninc.hpp:3, from stanExports_scmet.h:9, from stanExports_scmet.cc:5: F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument '__m128' [-Wignored-attributes] 60 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument '__m128d' [-Wignored-attributes] 62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 161 | template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 162 | template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 163 | template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 718 | struct palign_impl | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 741 | struct palign_impl | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 764 | struct palign_impl | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 778 | ptranspose(PacketBlock& kernel) { | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 783 | ptranspose(PacketBlock& kernel) { | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 790 | ptranspose(PacketBlock& kernel) { | ^ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/Core:377: F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/Core:370: F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__m128'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/Core:439: F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:17, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/shared_ptr.hpp:17, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/date_time/time_clock.hpp:17, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/date_time/posix_time/posix_time_types.hpp:10, from F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:15, from F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/rstaninc.hpp:4: F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/smart_ptr/detail/shared_count.hpp:361:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 361 | explicit shared_count( std::auto_ptr & r ): pi_( new sp_counted_impl_p( r.get() ) ) | ^~~~~~~~ In file included from c:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.2.0\include\c++\memory:76, from F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:7: c:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.2.0\include\c++\bits\unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:250:65: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 250 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R > | ^~~~~~~~ c:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.2.0\include\c++\bits\unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:507:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 507 | explicit shared_ptr( std::auto_ptr & r ): px(r.get()), pn() | ^~~~~~~~ c:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.2.0\include\c++\bits\unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:520:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 520 | shared_ptr( std::auto_ptr && r ): px(r.get()), pn() | ^~~~~~~~ c:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.2.0\include\c++\bits\unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:603:34: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 603 | shared_ptr & operator=( std::auto_ptr & r ) | ^~~~~~~~ c:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.2.0\include\c++\bits\unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:612:34: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 612 | shared_ptr & operator=( std::auto_ptr && r ) | ^~~~~~~~ c:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.2.0\include\c++\bits\unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function 'boost::shared_ptr& boost::shared_ptr::operator=(std::auto_ptr<_Up>&&)': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:614:38: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 614 | this_type( static_cast< std::auto_ptr && >( r ) ).swap( *this ); | ^~~~~~~~ c:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.2.0\include\c++\bits\unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/aux_/na_assert.hpp:23, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/arg.hpp:25, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/placeholders.hpp:24, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/iterator/iterator_categories.hpp:16, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/iterator/iterator_facade.hpp:13, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/iterator_range_core.hpp:27, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/lexical_cast.hpp:30, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/callbacks/writer.hpp:4, from F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/filtered_values.hpp:4, from F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:23: F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/assert.hpp: At global scope: F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of 'assert_arg' [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of 'assert_not_arg' [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37, from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/Sparse:26, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) long long int>::half' {aka '__m128i'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:55:39: required from 'class Eigen::LDLT >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:46:15: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:55:39: required from 'class Eigen::LDLT >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:46:15: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:281:19: required from 'class Eigen::LDLT >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:46:15: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from 'class Eigen::Diagonal, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:47:29: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:47:41: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Array >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Array >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::ArrayWrapper, 0> >, const Eigen::CwiseNullaryOp, Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, 0> >, const Eigen::CwiseNullaryOp, Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 0> >, const Eigen::CwiseNullaryOp, Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:47:45: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, true>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, -1, 1, true>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, 1, true, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, -1, 1, true, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, -1, 1, true>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/multiply_lower_tri_self_transpose.hpp:36:26: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, true>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, true>, -1, 1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, -1, 1, true>, -1, 1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, 1, true>, -1, 1, false, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, -1, 1, true>, -1, 1, false, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, -1, 1, true>, -1, 1, false>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from 'class Eigen::VectorBlock, -1, 1, true>, -1>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/multiply_lower_tri_self_transpose.hpp:36:34: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun.hpp:110, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim.hpp:14, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/io/dump.hpp:10, from F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:43: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/generalized_inverse.hpp: In function 'Eigen::Matrix::type, EigMat::ColsAtCompileTime, EigMat::RowsAtCompileTime> stan::math::generalized_inverse(const EigMat&)': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/generalized_inverse.hpp:34:9: warning: typedef 'using value_t = stan::value_type_t' locally defined but not used [-Wunused-local-typedefs] 34 | using value_t = value_type_t; | ^~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/identity_matrix.hpp:19:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/linspaced_array.hpp:37:49: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/linspaced_int_array.hpp:41:49: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/linspaced_row_vector.hpp:32:28: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/linspaced_row_vector.hpp:32:39: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/lmgamma.hpp:58:53: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Array >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Array >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/lmgamma.hpp:58:72: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Array >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/lmgamma.hpp:58:77: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/lmgamma.hpp:58:77: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/lmgamma.hpp:58:77: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::internal::member_lpnorm<1, double>, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::internal::member_lpnorm<1, double>, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::internal::member_lpnorm<1, double>, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from 'class Eigen::PartialReduxExpr, Eigen::internal::member_lpnorm<1, double>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/matrix_exp_action_handler.hpp:35:33: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/matrix_exp_action_handler.hpp:71:25: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/matrix_exp_action_handler.hpp:71:25: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Matrix, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Matrix, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Matrix, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Matrix, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/matrix_exp_action_handler.hpp:71:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/matrix_exp_action_handler.hpp:115:33: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/one_hot_row_vector.hpp:25:52: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/one_hot_vector.hpp:25:46: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun.hpp:319: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tail.hpp: In function 'std::vector stan::math::tail(const std::vector&, size_t)': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tail.hpp:46:9: warning: typedef 'using idx_t = stan::math::index_type_t >' locally defined but not used [-Wunused-local-typedefs] 46 | using idx_t = index_type_t>; | ^~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/unitspaced_array.hpp:30:47: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/welford_covar_estimator.hpp:13:64: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Matrix, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/welford_covar_estimator.hpp:26:31: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/welford_covar_estimator.hpp:27:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/welford_covar_estimator.hpp:27:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/welford_covar_estimator.hpp:28:38: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Matrix >, Eigen::Transpose >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Matrix >, Eigen::Transpose >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Matrix >, Eigen::Transpose >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, const Eigen::Matrix, const Eigen::Matrix >, Eigen::Transpose >, 0, 5>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, const Eigen::Matrix, const Eigen::Matrix >, Eigen::Transpose >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, const Eigen::Matrix, const Eigen::Matrix >, Eigen::Transpose >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/welford_covar_estimator.hpp:28:39: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/welford_covar_estimator.hpp:37:40: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/welford_var_estimator.hpp:28:30: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/ode_store_sensitivities.hpp:40:64: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/numeric/ublas/traits.hpp:21, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/numeric/ublas/storage.hpp:27, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/numeric/ublas/vector.hpp:21, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/numeric/odeint.hpp:25, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor.hpp:16, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim.hpp:15: F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/numeric/ublas/detail/iterator.hpp: At global scope: F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from c:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.2.0\include\c++\bits\stl_algobase.h:65, from c:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.2.0\include\c++\bits\specfun.h:45, from c:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.2.0\include\c++\cmath:1935, from F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include/Rcpp/platform/compiler.h:100, from F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include/Rcpp/r/headers.h:62, from F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include/RcppCommon.h:30, from F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include/Rcpp.h:27, from stanExports_scmet.cc:3: c:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.2.0\include\c++\bits\stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ c:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.2.0\include\c++\bits\stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ c:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.2.0\include\c++\bits\stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/fusion/functional/invocation/detail/that_ptr.hpp:13, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/fusion/functional/invocation/invoke.hpp:52, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/fusion/functional/adapter/fused.hpp:17, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/fusion/functional/generation/make_fused.hpp:13, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/fusion/include/make_fused.hpp:11, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/numeric/odeint/util/resize.hpp:28, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/numeric/odeint/util/state_wrapper.hpp:26, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:33: F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/get_pointer.hpp:48:40: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 48 | template T * get_pointer(std::auto_ptr const& p) | ^~~~~~~~ c:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.2.0\include\c++\bits\unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_log.hpp:5, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob.hpp:10, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim.hpp:16: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_lpmf.hpp: In function 'stan::return_type_t stan::math::bernoulli_logit_glm_lpmf(const T_y&, const T_x&, const T_alpha&, const T_beta&)': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_lpmf.hpp:59:9: warning: typedef 'using T_y_val = std::conditional_t::value, Eigen::Matrix::type, -1, 1>, typename stan::partials_return_type::type>' locally defined but not used [-Wunused-local-typedefs] 59 | using T_y_val = | ^~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/beta_log.hpp:5, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob.hpp:31: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/beta_lpdf.hpp: In function 'stan::return_type_t stan::math::beta_lpdf(const T_y&, const T_scale_succ&, const T_scale_fail&)': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/beta_lpdf.hpp:50:9: warning: typedef 'using T_partials_matrix = class Eigen::Matrix::type, -1, 1>' locally defined but not used [-Wunused-local-typedefs] 50 | using T_partials_matrix = Eigen::Matrix; | ^~~~~~~~~~~~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/beta_proportion_log.hpp:5, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob.hpp:37: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/beta_proportion_lpdf.hpp: In function 'stan::return_type_t stan::math::beta_proportion_lpdf(const T_y&, const T_loc&, const T_prec&)': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/beta_proportion_lpdf.hpp:55:9: warning: typedef 'using T_partials_array = class Eigen::Array::type, -1, 1>' locally defined but not used [-Wunused-local-typedefs] 55 | using T_partials_array = Eigen::Array; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/categorical_logit_glm_lpmf.hpp:143:15: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::InnerStride<1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::InnerStride<1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::InnerStride<1> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:59:34: required from 'class Eigen::RefBase, 0, Eigen::InnerStride<1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:235:77: required from 'class Eigen::Ref, 0, Eigen::InnerStride<1> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/cumulative_sum.hpp:56:49: required from 'auto stan::math::cumulative_sum(const EigVec&) [with EigVec = Eigen::Matrix; stan::require_eigen_vector_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/categorical_logit_rng.hpp:37:41: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/cauchy_log.hpp:5, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob.hpp:63: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/cauchy_lpdf.hpp: In function 'stan::return_type_t stan::math::cauchy_lpdf(const T_y&, const T_loc&, const T_scale&)': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/cauchy_lpdf.hpp:45:9: warning: typedef 'using T_partials_array = class Eigen::Array::type, -1, 1>' locally defined but not used [-Wunused-local-typedefs] 45 | using T_partials_array = Eigen::Array; | ^~~~~~~~~~~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/dirichlet_log.hpp:5, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob.hpp:74: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/dirichlet_lpdf.hpp: In function 'stan::return_type_t stan::math::dirichlet_lpdf(const T_prob&, const T_prior_size&)': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/dirichlet_lpdf.hpp:60:9: warning: typedef 'using T_partials_vec = struct Eigen::Matrix::type, -1, 1>' locally defined but not used [-Wunused-local-typedefs] 60 | using T_partials_vec = typename Eigen::Matrix; | ^~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log_sum_exp.hpp:90:42: required from 'stan::math::log_sum_exp >(const Eigen::Matrix&):: [with auto:82 = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_vector_unary.hpp:103:13: required from 'static auto stan::math::apply_vector_unary::type>::value, void>::type>::reduce(const T&, const F&) [with F = stan::math::log_sum_exp >(const Eigen::Matrix&)::; T = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log_sum_exp.hpp:81:39: required from 'auto stan::math::log_sum_exp(const T&) [with T = Eigen::Matrix; stan::require_container_st* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/dirichlet_rng.hpp:59:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Array >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log_sum_exp.hpp:90:42: required from 'stan::math::log_sum_exp >(const Eigen::Matrix&):: [with auto:82 = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_vector_unary.hpp:103:13: required from 'static auto stan::math::apply_vector_unary::type>::value, void>::type>::reduce(const T&, const F&) [with F = stan::math::log_sum_exp >(const Eigen::Matrix&)::; T = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log_sum_exp.hpp:81:39: required from 'auto stan::math::log_sum_exp(const T&) [with T = Eigen::Matrix; stan::require_container_st* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/dirichlet_rng.hpp:59:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log_sum_exp.hpp:90:42: required from 'stan::math::log_sum_exp >(const Eigen::Matrix&):: [with auto:82 = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_vector_unary.hpp:103:13: required from 'static auto stan::math::apply_vector_unary::type>::value, void>::type>::reduce(const T&, const F&) [with F = stan::math::log_sum_exp >(const Eigen::Matrix&)::; T = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log_sum_exp.hpp:81:39: required from 'auto stan::math::log_sum_exp(const T&) [with T = Eigen::Matrix; stan::require_container_st* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/dirichlet_rng.hpp:59:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log_sum_exp.hpp:90:26: required from 'stan::math::log_sum_exp >(const Eigen::Matrix&):: [with auto:82 = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_vector_unary.hpp:103:13: required from 'static auto stan::math::apply_vector_unary::type>::value, void>::type>::reduce(const T&, const F&) [with F = stan::math::log_sum_exp >(const Eigen::Matrix&)::; T = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log_sum_exp.hpp:81:39: required from 'auto stan::math::log_sum_exp(const T&) [with T = Eigen::Matrix; stan::require_container_st* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/dirichlet_rng.hpp:59:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/double_exponential_log.hpp:5, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob.hpp:91: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/double_exponential_lpdf.hpp: In function 'stan::return_type_t stan::math::double_exponential_lpdf(const T_y&, const T_loc&, const T_scale&)': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/double_exponential_lpdf.hpp:44:9: warning: typedef 'using T_partials_array = class Eigen::Array::type, -1, 1>' locally defined but not used [-Wunused-local-typedefs] 44 | using T_partials_array = Eigen::Array; | ^~~~~~~~~~~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob.hpp:111: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/frechet_cdf.hpp: In function 'stan::return_type_t stan::math::frechet_cdf(const T_y&, const T_shape&, const T_scale&)': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/frechet_cdf.hpp:30:9: warning: typedef 'using T_partials_array = class Eigen::Array::type, -1, 1>' locally defined but not used [-Wunused-local-typedefs] 30 | using T_partials_array = Eigen::Array; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::ArrayWrapper, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/gaussian_dlm_obs_rng.hpp:38:59: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 5>, Eigen::Matrix, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 5>, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 5>, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 5>, Eigen::Matrix, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 5>, Eigen::Matrix, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 5>, Eigen::Matrix, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/gaussian_dlm_obs_rng.hpp:46:75: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, Eigen::Product, 5>, Eigen::Matrix, 0>, 2>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >, Eigen::Product, 5>, Eigen::Matrix, 0>, 2> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >, Eigen::Product, 5>, Eigen::Matrix, 0>, 2> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base > >, Eigen::Product, 5>, Eigen::Matrix, 0>, 2, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl > >, Eigen::Product, 5>, Eigen::Matrix, 0>, 2, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product > >, Eigen::Product, 5>, Eigen::Matrix, 0>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/gaussian_dlm_obs_rng.hpp:46:76: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/gaussian_dlm_obs_rng.hpp:135:41: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/hmm_latent_rng.hpp:83:27: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::TriangularView >, 2>, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::TriangularView >, 2>, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::TriangularView >, 2>, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::TriangularView >, 2>, 0, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::TriangularView >, 2>, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::TriangularView >, 2>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:42: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::TriangularView >, 2>, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::TriangularView >, 2>, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::TriangularView >, 2>, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::TriangularView >, 2>, 0>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:32: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/inv_wishart_rng.hpp:27:36: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose >, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose >, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose >, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose >, const Eigen::Matrix, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose >, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/inv_wishart_rng.hpp:27:40: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::Transpose >, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::Transpose >, const Eigen::Matrix >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::Transpose >, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/inv_wishart_rng.hpp:27:40: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::Transpose >, const Eigen::Matrix > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::Transpose >, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::Transpose >, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::Transpose >, const Eigen::Matrix >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::Transpose >, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/inv_wishart_rng.hpp:27:40: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::ArrayWrapper, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/matrix_normal_prec_rng.hpp:89:47: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper, 0> > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper, 0> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper, 0> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper, 0> > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/matrix_normal_prec_rng.hpp:89:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 6>, Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, 6>, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, 6>, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from 'class Eigen::SolveImpl >, 6>, Eigen::Matrix, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from 'class Eigen::Solve >, 6>, Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/matrix_normal_prec_rng.hpp:109:64: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 6>, Eigen::Matrix > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, 6>, Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, 6>, Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl >, 6>, Eigen::Matrix >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/matrix_normal_prec_rng.hpp:108:51: recursively required by substitution of 'template const Eigen::internal::triangular_solve_retval >, 6>, Other> Eigen::TriangularViewImpl >, 6, Eigen::Dense>::solve(const Eigen::MatrixBase&) const [with int Side = ; Other = ]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/matrix_normal_prec_rng.hpp:108:51: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from 'struct Eigen::internal::accessors_level >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from 'class Eigen::SolveImpl >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from 'class Eigen::Solve >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/matrix_normal_prec_rng.hpp:110:32: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from 'class Eigen::SolveImpl >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from 'class Eigen::Solve >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/matrix_normal_prec_rng.hpp:110:32: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/matrix_normal_prec_rng.hpp:110:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, Eigen::Transpose >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >, 2>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >, Eigen::Transpose >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >, 2> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >, Eigen::Transpose >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >, 2> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base > >, Eigen::Transpose >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >, 2, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl > >, Eigen::Transpose >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >, 2, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product > >, Eigen::Transpose >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/matrix_normal_prec_rng.hpp:111:51: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, Eigen::Transpose >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >, 2>, Eigen::Transpositions<-1, -1, int>, 2>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >, Eigen::Transpose >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >, 2>, Eigen::Transpositions<-1, -1, int>, 2> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >, Eigen::Transpose >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >, 2>, Eigen::Transpositions<-1, -1, int>, 2> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base > >, Eigen::Transpose >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >, 2>, Eigen::Transpositions<-1, -1, int>, 2, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl > >, Eigen::Transpose >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >, 2>, Eigen::Transpositions<-1, -1, int>, 2, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product > >, Eigen::Transpose >, 6>, Eigen::Transpose >, 6>, Eigen::Matrix > > > >, 2>, Eigen::Transpositions<-1, -1, int>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/matrix_normal_prec_rng.hpp:111:52: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/as_array_or_scalar.hpp:46:43: required from 'stan::math::as_array_or_scalar&>(const std::vector&):: [with auto:28 = const std::vector]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/meta/holder.hpp:384:41: required by substitution of 'template()((declval)()...))>* > auto stan::math::make_holder(const F&, Args&& ...) [with F = stan::math::as_array_or_scalar&>(const std::vector&)::; Args = {const std::vector >&}; stan::require_plain_type_t()((declval)()...))>* = ]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/as_array_or_scalar.hpp:46:21: required from 'auto stan::math::as_array_or_scalar(T&&) [with T = const std::vector&; stan::require_std_vector_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/multinomial_logit_lpmf.hpp:36:45: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/multinomial_logit_lpmf.hpp:39:55: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >&)::, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >&)::, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >&)::, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >&)::, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >&)::, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_scalar_unary.hpp:70:23: required from 'static auto stan::math::apply_scalar_unary::type>::value, void>::type>::apply(const T&) [with F = stan::math::lgamma_fun; T = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_scalar_unary.hpp:87:38: required from 'struct stan::math::apply_scalar_unary, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, void>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/lgamma.hpp:120:50: required from 'auto stan::math::lgamma(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; stan::require_not_nonscalar_prim_or_rev_kernel_expression_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/multinomial_logit_lpmf.hpp:39:44: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Array, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:130:28: recursively required by substitution of 'template const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, ThenDerived, typename ThenDerived::ConstantReturnType> Eigen::DenseBase, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array > >::select(const Eigen::DenseBase&, const typename ThenDerived::Scalar&) const [with ThenDerived = ]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:130:28: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Array, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Array >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:130:52: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseUnaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:130:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:130:60: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Select.h:52:7: required from 'class Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:130:67: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:130:67: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Select.h:52:7: required from 'class Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:132:67: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:138:17: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:139:16: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::Array >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::Array, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:142:71: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_scalar_unary.hpp:70:23: required from 'static auto stan::math::apply_scalar_unary::type>::value, void>::type>::apply(const T&) [with F = stan::math::log1m_exp_fun; T = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_scalar_unary.hpp:87:38: required from 'struct stan::math::apply_scalar_unary, const Eigen::Array, const Eigen::Array >, void>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log1m_exp.hpp:83:53: required from 'auto stan::math::log1m_exp(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:142:59: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:142:79: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, const Eigen::CwiseUnaryOp, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, const Eigen::CwiseUnaryOp, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, const Eigen::CwiseUnaryOp, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, const Eigen::CwiseUnaryOp, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, const Eigen::CwiseUnaryOp, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:143:34: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:143:34: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, const Eigen::CwiseUnaryOp, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, const Eigen::CwiseUnaryOp, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, const Eigen::CwiseUnaryOp, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, const Eigen::CwiseUnaryOp, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:140:58: recursively required by substitution of 'template const Eigen::Select, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, typename ElseDerived::ConstantReturnType, ElseDerived> Eigen::DenseBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >::select(const typename ElseDerived::Scalar&, const Eigen::DenseBase&) const [with ElseDerived = ]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:140:58: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, const Eigen::CwiseUnaryOp, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, const Eigen::CwiseUnaryOp, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, const Eigen::CwiseUnaryOp, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:139:23: recursively required by substitution of 'template const Eigen::Select, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, typename ElseDerived::ConstantReturnType, ElseDerived> Eigen::DenseBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >::select(const typename ElseDerived::Scalar&, const Eigen::DenseBase&) const [with ElseDerived = ]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:139:23: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, Eigen::Select, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, const Eigen::CwiseUnaryOp, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > > > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, Eigen::Select, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, const Eigen::CwiseUnaryOp, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, Eigen::Select, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, const Eigen::CwiseUnaryOp, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Select.h:52:7: required from 'class Eigen::Select, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, Eigen::Select, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::Array, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Array, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >, const Eigen::CwiseUnaryOp, const Eigen::Array, const Eigen::Array >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >&)::, const Eigen::Array, const Eigen::Array >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >, const Eigen::CwiseBinaryOp, const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:144:16: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:164:57: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Array, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Array >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:164:77: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:164:78: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::Array > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::Array > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::Array > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::Array > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:164:28: recursively required by substitution of 'template const Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, typename ElseDerived::ConstantReturnType, ElseDerived> Eigen::DenseBase, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array > >::select(const typename ElseDerived::Scalar&, const Eigen::DenseBase&) const [with ElseDerived = ]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:164:28: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:164:28: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:165:47: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::Array > > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::Array > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Select.h:52:7: required from 'class Eigen::Select, const Eigen::CwiseNullaryOp, Eigen::Array >, const Eigen::Array >, Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::Array > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:165:47: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:165:47: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:167:33: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_glm_lpmf.hpp:169:50: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_log.hpp:5, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob.hpp:245: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_lpmf.hpp: In function 'stan::return_type_t stan::math::ordered_logistic_lpmf(const T_y&, const T_loc&, const T_cut&)': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/ordered_logistic_lpmf.hpp:76:9: warning: typedef 'using T_partials_array = class Eigen::Array::type, -1, 1>' locally defined but not used [-Wunused-local-typedefs] 76 | using T_partials_array = Eigen::Array; | ^~~~~~~~~~~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_log.hpp:5, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob.hpp:277: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_lpmf.hpp: In function 'stan::return_type_t stan::math::poisson_log_glm_lpmf(const T_y&, const T_x&, const T_alpha&, const T_beta&)': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_lpmf.hpp:62:9: warning: typedef 'using T_alpha_val = std::conditional_t::value, Eigen::Array::type, -1, 1>, typename stan::partials_return_type::type>' locally defined but not used [-Wunused-local-typedefs] 62 | using T_alpha_val = typename std::conditional_t< | ^~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, -1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, -1, -1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, -1, false, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, -1, -1, false, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, -1, -1, false>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp:103:16: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, -1, -1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, -1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp:112:28: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, 0>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, 0>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from 'class Eigen::Diagonal, -1, -1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp:117:27: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun.hpp:32, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev.hpp:10, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/test_gradients.hpp:7, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8, from F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:49: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp: In lambda function: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp:83:11: warning: typedef 'using Block_ = class Eigen::Block, -1, -1, false>' locally defined but not used [-Wunused-local-typedefs] 83 | using Block_ = Eigen::Block; | ^~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::OuterStride<> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::OuterStride<> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::OuterStride<> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 0, Eigen::OuterStride<> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:59:34: required from 'class Eigen::RefBase, 0, Eigen::OuterStride<> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:193:76: required from 'class Eigen::Ref, 0, Eigen::OuterStride<> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:61:39: required from 'class Eigen::LLT, 0, Eigen::OuterStride<> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp:143:57: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:19:7: required from 'class stan::math::arena_matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp:145:6: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 0, Eigen::Stride<0, 0> >, 1, -1, false, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, 0, Eigen::Stride<0, 0> >, 1, -1, false, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, 0, Eigen::Stride<0, 0> >, 1, -1, false>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cholesky_factor_constrain.hpp:43:17: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun.hpp:34: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cholesky_factor_constrain.hpp: In function 'stan::math::var_value > stan::math::cholesky_factor_constrain(const T&, int, int)': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cholesky_factor_constrain.hpp:32:9: warning: typedef 'using T_scalar = stan::value_type_t' locally defined but not used [-Wunused-local-typedefs] 32 | using T_scalar = value_type_t; | ^~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, 0, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:28:50: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:28:27: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:31:46: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:32:23: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:101:7: required from 'class Eigen::CwiseUnaryViewImpl*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:7: required from 'class Eigen::CwiseUnaryView*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/divide.hpp:40:36: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> > >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> > >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:101:7: required from 'class Eigen::CwiseUnaryViewImpl*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:7: required from 'class Eigen::CwiseUnaryView*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/divide.hpp:40:62: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > > >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > > >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/divide.hpp:40:69: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> > > >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> > > >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/divide.hpp:40:69: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > > >, const Eigen::ArrayWrapper*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> > > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > > >, const Eigen::ArrayWrapper*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > > >, const Eigen::ArrayWrapper*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > > >, const Eigen::ArrayWrapper*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> > > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > > >, const Eigen::ArrayWrapper*, -1, -1> > >::val_Op, Eigen::Map*, -1, -1> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/divide.hpp:40:71: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseUnaryView*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseUnaryView*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseUnaryView*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseUnaryView*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseUnaryView*, -1, -1> > >::adj_Op, Eigen::Map*, -1, -1> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/divide.hpp:73:41: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1> >::val_Op, const Eigen::Matrix, -1, -1> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1> >::val_Op, const Eigen::Matrix, -1, -1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1> >::val_Op, const Eigen::Matrix, -1, -1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, -1, -1> >::val_Op, const Eigen::Matrix, -1, -1>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, -1, -1> >::val_Op, const Eigen::Matrix, -1, -1> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:45:15: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from 'class Eigen::Diagonal, -1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:96:21: required from 'class Eigen::Tridiagonalization >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:105:62: required from 'class Eigen::SelfAdjointEigenSolver >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:69:42: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:69:58: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1>&>(const Eigen::Matrix, -1, -1>&)::::, const Eigen::Matrix, -1, -1> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1>&>(const Eigen::Matrix, -1, -1>&)::::, const Eigen::Matrix, -1, -1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1>&>(const Eigen::Matrix, -1, -1>&)::::, const Eigen::Matrix, -1, -1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, -1, -1>&>(const Eigen::Matrix, -1, -1>&)::::, const Eigen::Matrix, -1, -1>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, -1, -1>&>(const Eigen::Matrix, -1, -1>&)::::, const Eigen::Matrix, -1, -1> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/value_of_rec.hpp:110:66: required from 'stan::math::value_of_rec, -1, -1>&>(const Eigen::Matrix, -1, -1>&):: [with auto:1 = const Eigen::Matrix, -1, -1>]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/meta/holder.hpp:384:41: required by substitution of 'template()((declval)()...))>* > auto stan::math::make_holder(const F&, Args&& ...) [with F = stan::math::value_of_rec, -1, -1>&>(const Eigen::Matrix, -1, -1>&)::; Args = {const Eigen::Matrix, -1, -1, 0, -1, -1>&}; stan::require_plain_type_t()((declval)()...))>* = ]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/value_of_rec.hpp:108:21: required from 'auto stan::math::value_of_rec(T&&) [with T = const Eigen::Matrix, -1, -1>&; = void; = void]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:83:31: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvectors_sym.hpp:75:56: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvectors_sym.hpp:75:39: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvectors_sym.hpp:75:61: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvectors_sym.hpp:75:77: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun.hpp:71: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/generalized_inverse.hpp: In function 'auto stan::math::generalized_inverse(const VarMat&)': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/generalized_inverse.hpp:64:9: warning: typedef 'using value_t = stan::value_type_t' locally defined but not used [-Wunused-local-typedefs] 64 | using value_t = value_type_t; | ^~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1> >::adj_Op, Eigen::Matrix, -1, 1> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1> >::adj_Op, Eigen::Matrix, -1, 1> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1> >::adj_Op, Eigen::Matrix, -1, 1> >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1> >::adj_Op, Eigen::Matrix, -1, 1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1> >::adj_Op, Eigen::Matrix, -1, 1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:101:7: required from 'class Eigen::CwiseUnaryViewImpl, -1, 1> >::adj_Op, Eigen::Matrix, -1, 1>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:7: required from 'class Eigen::CwiseUnaryView, -1, 1> >::adj_Op, Eigen::Matrix, -1, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/grad.hpp:27:12: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log.hpp:66:51: required from 'stan::math::log, 0> >(const Eigen::Diagonal, 0>&):: [with auto:18 = Eigen::Diagonal, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_vector_unary.hpp:48:25: required from 'static auto stan::math::apply_vector_unary::type>::value, void>::type>::apply(const T&, const F&) [with F = stan::math::log, 0> >(const Eigen::Diagonal, 0>&)::; T2 = Eigen::Diagonal, 0>; stan::require_t::type> >* = 0; T = Eigen::Diagonal, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log.hpp:65:46: required from 'auto stan::math::log(const Container&) [with Container = Eigen::Diagonal, 0>; stan::require_container_st* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/log_determinant_spd.hpp:49:23: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::ArrayWrapper, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log.hpp:66:51: required from 'stan::math::log, 0> >(const Eigen::Diagonal, 0>&):: [with auto:18 = Eigen::Diagonal, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_vector_unary.hpp:48:25: required from 'static auto stan::math::apply_vector_unary::type>::value, void>::type>::apply(const T&, const F&) [with F = stan::math::log, 0> >(const Eigen::Diagonal, 0>&)::; T2 = Eigen::Diagonal, 0>; stan::require_t::type> >* = 0; T = Eigen::Diagonal, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log.hpp:65:46: required from 'auto stan::math::log(const Container&) [with Container = Eigen::Diagonal, 0>; stan::require_container_st* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/log_determinant_spd.hpp:49:23: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, 0> > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper, 0> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::ArrayWrapper, 0> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7: required from 'class Eigen::MatrixWrapper, const Eigen::ArrayWrapper, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_vector_unary.hpp:47:70: required from 'stan::math::apply_vector_unary, 0>, void>::apply, 0> >(const Eigen::Diagonal, 0>&):: >(const Eigen::Diagonal, 0>&, const stan::math::log, 0> >(const Eigen::Diagonal, 0>&)::&):: [with auto:5 = Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper, 0> > >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/meta/holder.hpp:384:41: required by substitution of 'template()((declval)()...))>* > auto stan::math::make_holder(const F&, Args&& ...) [with F = stan::math::apply_vector_unary, 0>, void>::apply, 0> >(const Eigen::Diagonal, 0>&):: >(const Eigen::Diagonal, 0>&, const stan::math::log, 0> >(const Eigen::Diagonal, 0>&)::&)::; Args = {Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper, 0> > >}; stan::require_plain_type_t()((declval)()...))>* = ]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_vector_unary.hpp:47:23: required from 'static auto stan::math::apply_vector_unary::type>::value, void>::type>::apply(const T&, const F&) [with F = stan::math::log, 0> >(const Eigen::Diagonal, 0>&)::; T2 = Eigen::Diagonal, 0>; stan::require_t::type> >* = 0; T = Eigen::Diagonal, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log.hpp:65:46: required from 'auto stan::math::log(const Container&) [with Container = Eigen::Diagonal, 0>; stan::require_container_st* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/log_determinant_spd.hpp:49:23: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/log_softmax.hpp:73:47: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/matrix_power.hpp:63:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, 0, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/matrix_power.hpp:64:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/mdivide_left_tri.hpp:85:56: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Transpose > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Transpose > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Transpose > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Transpose >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Transpose > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/quad_form.hpp:25:46: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 0, Eigen::Stride<0, 0> >, -1, 1, true, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, 0, Eigen::Stride<0, 0> >, -1, 1, true, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/read_corr_L.hpp:55:11: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:19:7: required from 'class stan::math::arena_matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/read_corr_L.hpp:56:12: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, 1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, 1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, 1, false>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, 0, Eigen::Stride<0, 0> >, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, 1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, 1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 0, Eigen::Stride<0, 0> >, -1, 1, false, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, 0, Eigen::Stride<0, 0> >, -1, 1, false, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, false>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from 'class Eigen::VectorBlock, 0, Eigen::Stride<0, 0> >, -1>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/read_corr_L.hpp:63:57: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, -1, 1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, 1, false, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, -1, 1, false, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, -1, 1, false>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from 'class Eigen::VectorBlock, -1>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/read_corr_L.hpp:86:37: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Block, -1, 1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Block, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Block, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Block, -1, 1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Block, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/read_corr_L.hpp:86:58: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/read_corr_L.hpp:90:33: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 0, Eigen::Stride<0, 0> > >, -1, 1, true, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, 0, Eigen::Stride<0, 0> > >, -1, 1, true, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, 0, Eigen::Stride<0, 0> > >, -1, 1, true>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/read_corr_L.hpp:90:40: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, -1, 1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, -1, 1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, -1, 1, false>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, -1, 1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, -1, 1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, -1, 1, false, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, -1, 1, false, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, -1, 1, false>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from 'class Eigen::VectorBlock, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, -1>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/read_corr_L.hpp:90:78: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Block, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, 1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/read_corr_L.hpp:90:78: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/read_cov_matrix.hpp:56:57: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Transpose > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Transpose > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Transpose > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Transpose >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Transpose > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/svd_U.hpp:58:67: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Transpose > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Transpose > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Matrix, const Eigen::Transpose > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper, const Eigen::Matrix, const Eigen::Transpose > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/svd_U.hpp:58:74: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, 0, Eigen::Stride<0, 0> > >, const Eigen::ArrayWrapper, const Eigen::Matrix, const Eigen::Transpose > > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper, 0, Eigen::Stride<0, 0> > >, const Eigen::ArrayWrapper, const Eigen::Matrix, const Eigen::Transpose > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper, 0, Eigen::Stride<0, 0> > >, const Eigen::ArrayWrapper, const Eigen::Matrix, const Eigen::Transpose > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, 0, Eigen::Stride<0, 0> > >, const Eigen::ArrayWrapper, const Eigen::Matrix, const Eigen::Transpose > > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 0, Eigen::Stride<0, 0> > >, const Eigen::ArrayWrapper, const Eigen::Matrix, const Eigen::Transpose > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/svd_U.hpp:59:22: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/svd_V.hpp:59:30: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, 0, Eigen::Stride<0, 0> > >, const Eigen::ArrayWrapper, const Eigen::Matrix, const Eigen::Transpose > > > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper, 0, Eigen::Stride<0, 0> > >, const Eigen::ArrayWrapper, const Eigen::Matrix, const Eigen::Transpose > > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::ArrayWrapper, 0, Eigen::Stride<0, 0> > >, const Eigen::ArrayWrapper, const Eigen::Matrix, const Eigen::Transpose > > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7: required from 'class Eigen::MatrixWrapper, const Eigen::ArrayWrapper, 0, Eigen::Stride<0, 0> > >, const Eigen::ArrayWrapper, const Eigen::Matrix, const Eigen::Transpose > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/svd_V.hpp:59:30: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Map, 0, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DiagonalMatrix.h:230:47: required from 'struct Eigen::internal::traits, const Eigen::Map, 0, Eigen::Stride<0, 0> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/EigenBase.h:41:59: required from 'struct Eigen::EigenBase, const Eigen::Map, 0, Eigen::Stride<0, 0> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DiagonalMatrix.h:18:7: required from 'class Eigen::DiagonalBase, const Eigen::Map, 0, Eigen::Stride<0, 0> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DiagonalMatrix.h:245:7: required from 'class Eigen::DiagonalWrapper, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/svd_V.hpp:61:53: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:101:7: required from 'class Eigen::CwiseUnaryViewImpl*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:7: required from 'class Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/squared_distance.hpp:79:41: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/squared_distance.hpp:79:57: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/squared_distance.hpp:79:58: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase*, -1, 1> > >::adj_Op, Eigen::Map*, -1, 1> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase*, -1, 1> > >::adj_Op, Eigen::Map*, -1, 1> > >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase*, -1, 1> > >::adj_Op, Eigen::Map*, -1, 1> > >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase*, -1, 1> > >::adj_Op, Eigen::Map*, -1, 1> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase*, -1, 1> > >::adj_Op, Eigen::Map*, -1, 1> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:101:7: required from 'class Eigen::CwiseUnaryViewImpl*, -1, 1> > >::adj_Op, Eigen::Map*, -1, 1> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:7: required from 'class Eigen::CwiseUnaryView*, -1, 1> > >::adj_Op, Eigen::Map*, -1, 1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/squared_distance.hpp:80:15: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/squared_distance.hpp:111:72: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryView*, -1, 1> > >::val_Op, Eigen::Map*, -1, 1> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/squared_distance.hpp:111:73: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:101:7: required from 'class Eigen::CwiseUnaryViewImpl, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:7: required from 'class Eigen::CwiseUnaryView, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/variance.hpp:23:36: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/variance.hpp:25:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::ArrayWrapper > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::ArrayWrapper >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::ArrayWrapper > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/variance.hpp:27:57: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::ArrayWrapper > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::ArrayWrapper > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::ArrayWrapper > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::ArrayWrapper > >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::ArrayWrapper > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/variance.hpp:27:61: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1>&>(const Eigen::Matrix, -1, 1>&)::::, const Eigen::Matrix, -1, 1> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1>&>(const Eigen::Matrix, -1, 1>&)::::, const Eigen::Matrix, -1, 1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1>&>(const Eigen::Matrix, -1, 1>&)::::, const Eigen::Matrix, -1, 1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, -1, 1>&>(const Eigen::Matrix, -1, 1>&)::::, const Eigen::Matrix, -1, 1>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, -1, 1>&>(const Eigen::Matrix, -1, 1>&)::::, const Eigen::Matrix, -1, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/value_of.hpp:58:75: required from 'stan::math::value_of, -1, 1>&>(const Eigen::Matrix, -1, 1>&):: [with auto:9 = const Eigen::Matrix, -1, 1>]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/meta/holder.hpp:384:41: required by substitution of 'template()((declval)()...))>* > auto stan::math::make_holder(const F&, Args&& ...) [with F = stan::math::value_of, -1, 1>&>(const Eigen::Matrix, -1, 1>&)::; Args = {const Eigen::Matrix, -1, 1, 0, -1, 1>&}; stan::require_plain_type_t()((declval)()...))>* = ]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/value_of.hpp:56:21: required from 'auto stan::math::value_of(EigMat&&) [with EigMat = const Eigen::Matrix, -1, 1>&; stan::require_eigen_t* = 0; stan::require_not_st_arithmetic* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/functor/algebra_solver_fp.hpp:96:37: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 0, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/functor/idas_forward_system.hpp:148:16: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::ArrayWrapper >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_fullrank.hpp:182:62: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_fullrank.hpp:183:57: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::ArrayWrapper >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_fullrank.hpp:183:66: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::ArrayWrapper >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_fullrank.hpp:197:60: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::ArrayWrapper >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_fullrank.hpp:198:64: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_fullrank.hpp:263:18: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_fullrank.hpp:351:23: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Matrix, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_fullrank.hpp:351:30: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from 'class Eigen::Diagonal, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_fullrank.hpp:459:22: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0> >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_fullrank.hpp:459:69: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::ArrayWrapper, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_fullrank.hpp:459:69: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::ArrayWrapper >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_meanfield.hpp:314:55: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_meanfield.hpp:314:36: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > >, const Eigen::ArrayWrapper > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > >, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > >, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > >, const Eigen::ArrayWrapper >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > >, const Eigen::ArrayWrapper > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_meanfield.hpp:314:71: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_meanfield.hpp:370:75: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::Matrix, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base >, Eigen::Matrix, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl >, Eigen::Matrix, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, Eigen::Matrix, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/newton.hpp:22:58: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:22:38: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:22:38: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:22:56: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:121:7: required from 'class Eigen::internal::dense_product_base, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0, 6>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:22:56: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:174:81: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:121:7: required from 'class Eigen::internal::dense_product_base, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0, 6>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:22:56: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/to_matrix.hpp:124:17: required from 'auto stan::math::to_matrix(const std::vector&, int, int) [with T = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/read_dense_inv_metric.hpp:33:39: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/covar_adaptation.hpp:29:75: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/covar_adaptation.hpp:29:75: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Matrix, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/diag_e_metric.hpp:21:25: recursively required by substitution of 'template typename Eigen::ScalarBinaryOpTraits::Scalar, Eigen::internal::scalar_product_op::Scalar> >::ReturnType Eigen::MatrixBase >::dot(const Eigen::MatrixBase&) const [with OtherDerived = ]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/diag_e_metric.hpp:21:25: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/var_adaptation.hpp:27:31: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/var_adaptation.hpp:28:74: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/var_adaptation.hpp:28:74: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/indexing.hpp:8, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/model_header.hpp:15, from stanExports_scmet.h:11: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/indexing/lvalue_varmat.hpp: In function 'void stan::model::assign(Mat1&&, const cons_index_list >&, const Mat2&, const char*, int)': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/indexing/lvalue_varmat.hpp:349:9: warning: typedef 'using pair_type = struct std::pair > >' locally defined but not used [-Wunused-local-typedefs] 349 | using pair_type = std::pair; | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:19:7: required from 'class stan::math::arena_matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:157:15: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, void>::apply(const Eigen::Matrix&)::, void>::scalar_t)>, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, void>::apply(const Eigen::Matrix&)::, void>::scalar_t)>, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, void>::apply(const Eigen::Matrix&)::, void>::scalar_t)>, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, void>::apply(const Eigen::Matrix&)::, void>::scalar_t)>, const Eigen::Matrix, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, void>::apply(const Eigen::Matrix&)::, void>::scalar_t)>, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_scalar_unary.hpp:70:23: required from 'static auto stan::math::apply_scalar_unary::type>::value, void>::type>::apply(const T&) [with F = stan::math::inv_logit_fun; T = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_scalar_unary.hpp:87:38: required from 'struct stan::math::apply_scalar_unary, void>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/inv_logit.hpp:88:53: required from 'auto stan::math::inv_logit(const T&) [with T = Eigen::Matrix; stan::require_not_var_matrix_t* = 0; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0]' stanExports_scmet.h:936:45: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:29:35: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Transpose >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Transpose >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Transpose >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Transpose >, 0, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Transpose >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Transpose >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:29:18: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/lmgamma.hpp:58:75: required from 'stan::return_type_t stan::math::lmgamma(int, T) [with T = double; stan::require_arithmetic_t* = 0; stan::return_type_t = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/lmgamma.hpp:16:27: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/lmgamma.hpp:58:32: required from 'stan::return_type_t stan::math::lmgamma(int, T) [with T = double; stan::require_arithmetic_t* = 0; stan::return_type_t = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/lmgamma.hpp:16:27: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >&)::, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >&)::, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >&)::, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >&)::, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, void>::apply(const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >&)::, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, void>::scalar_t)>, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_scalar_unary.hpp:70:23: required from 'static auto stan::math::apply_scalar_unary::type>::value, void>::type>::apply(const T&) [with F = stan::math::lgamma_fun; T = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_scalar_unary.hpp:87:38: required from 'struct stan::math::apply_scalar_unary, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, void>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/lgamma.hpp:120:50: required from 'auto stan::math::lgamma(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >; stan::require_not_nonscalar_prim_or_rev_kernel_expression_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/lmgamma.hpp:58:29: required from 'stan::return_type_t stan::math::lmgamma(int, T) [with T = double; stan::require_arithmetic_t* = 0; stan::return_type_t = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/lmgamma.hpp:16:27: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Matrix; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/variance.hpp:28:37: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Array >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Array >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:27:67: required from 'Derived& Eigen::ArrayBase::operator+=(const Scalar&) [with Derived = Eigen::ArrayWrapper >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_fullrank.hpp:280:24: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:7, from F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:68: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/io/array_var_context.hpp: In instantiation of 'std::vector stan::io::array_var_context::validate_dims(const std::vector >&, T, const std::vector >&) [with T = long long unsigned int]': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/io/array_var_context.hpp:96:48: required from here F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/io/array_var_context.hpp:73:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long long unsigned int'} [-Wsign-compare] 73 | for (int i = 0; i < dims.size(); i++) { | ~~^~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/io/array_var_context.hpp: In instantiation of 'std::vector stan::io::array_var_context::validate_dims(const std::vector >&, T, const std::vector >&) [with T = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/io/array_var_context.hpp:117:48: required from here F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/io/array_var_context.hpp:73:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long long unsigned int'} [-Wsign-compare] F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp: In instantiation of 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]': stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 1252 | int ret = stan::services::error_codes::CONFIG; | ^~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:433:34: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_not_nan.hpp:5, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_2F1_converges.hpp:5, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err.hpp:4, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim.hpp:12: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/elementwise_check.hpp: In instantiation of 'void stan::math::elementwise_check(const F&, const char*, const char*, const T&, const char*, const Indexings& ...) [with F = check_not_nan >(const char*, const char*, const Eigen::Matrix&)::; T = Eigen::Matrix; Indexings = {}; stan::require_eigen_t* = 0; std::enable_if_t<((Eigen::internal::traits<_Rhs>::Flags & Eigen::LinearAccessBit) || T::IsVectorAtCompileTime)>* = 0]': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_not_nan.hpp:28:20: required from 'void stan::math::check_not_nan(const char*, const char*, const T_y&) [with T_y = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_fullrank.hpp:47:30: required from here F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/elementwise_check.hpp:158:24: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'Eigen::EigenBase >::Index' {aka 'long long int'} [-Wsign-compare] 158 | for (size_t i = 0; i < x.size(); i++) { | ~~^~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/elementwise_check.hpp: In instantiation of 'void stan::math::elementwise_check(const F&, const char*, const char*, const T&, const char*, const Indexings& ...) [with F = check_not_nan >(const char*, const char*, const Eigen::Matrix&)::; T = Eigen::Matrix; Indexings = {}; stan::require_eigen_t* = 0; std::enable_if_t<(((!(Eigen::internal::traits<_Rhs>::Flags & Eigen::LinearAccessBit)) && (! T::IsVectorAtCompileTime)) && (!(Eigen::internal::traits<_Rhs>::Flags & Eigen::RowMajorBit)))>* = 0]': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_not_nan.hpp:28:20: required from 'void stan::math::check_not_nan(const char*, const char*, const T_y&) [with T_y = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_fullrank.hpp:74:30: required from here F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/elementwise_check.hpp:222:24: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'Eigen::Index' {aka 'long long int'} [-Wsign-compare] 222 | for (size_t i = 0; i < x.rows(); i++) { | ~~^~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/elementwise_check.hpp:223:26: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'Eigen::Index' {aka 'long long int'} [-Wsign-compare] 223 | for (size_t j = 0; j < x.cols(); j++) { | ~~^~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/elementwise_check.hpp: In instantiation of 'void stan::math::elementwise_check(const F&, const char*, const char*, const T&, const char*, const Indexings& ...) [with F = check_finite >(const char*, const char*, const Eigen::Matrix&)::; T = Eigen::Matrix; Indexings = {}; stan::require_eigen_t* = 0; std::enable_if_t<((Eigen::internal::traits<_Rhs>::Flags & Eigen::LinearAccessBit) || T::IsVectorAtCompileTime)>* = 0]': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_finite.hpp:29:20: required from 'void stan::math::check_finite(const char*, const char*, const T_y&) [with T_y = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_diag_inv_metric.hpp:21:29: required from here F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/elementwise_check.hpp:158:24: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'Eigen::EigenBase >::Index' {aka 'long long int'} [-Wsign-compare] 158 | for (size_t i = 0; i < x.size(); i++) { | ~~^~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/elementwise_check.hpp: In instantiation of 'void stan::math::elementwise_check(const F&, const char*, const char*, const T&, const char*, const Indexings& ...) [with F = check_positive >(const char*, const char*, const Eigen::Matrix&)::; T = Eigen::Matrix; Indexings = {}; stan::require_eigen_t* = 0; std::enable_if_t<((Eigen::internal::traits<_Rhs>::Flags & Eigen::LinearAccessBit) || T::IsVectorAtCompileTime)>* = 0]': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_positive.hpp:29:20: required from 'void stan::math::check_positive(const char*, const char*, const T_y&) [with T_y = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_diag_inv_metric.hpp:22:31: required from here F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/elementwise_check.hpp:158:24: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'Eigen::EigenBase >::Index' {aka 'long long int'} [-Wsign-compare] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp: In instantiation of 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]': F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:89:22: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'long long unsigned int'} and 'Eigen::Index' {aka 'long long int'} [-Wsign-compare] 89 | if (p_names.size() != draws.cols()) { | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:107:24: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'Eigen::Index' {aka 'long long int'} [-Wsign-compare] 107 | for (size_t i = 0; i < draws.rows(); ++i) { | ~~^~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, -1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 1, -1, false, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, 1, -1, false, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, 1, -1, false>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:111:65: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/assert.hpp:35, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept_check.hpp:20, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:19, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/size_type.hpp:20, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/size.hpp:21, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/functions.hpp:20, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/iterator_range_core.hpp:38: F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::constraint::failed() [with Model = boost::algorithm::FinderConcept, __gnu_cxx::__normal_iterator > >]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/find_format.hpp:98:13: required from 'void boost::algorithm::find_format(SequenceT&, FinderT, FormatterT) [with SequenceT = std::__cxx11::basic_string; FinderT = detail::first_finderF; FormatterT = detail::const_formatF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/replace.hpp:179:44: required from 'void boost::algorithm::replace_first(SequenceT&, const Range1T&, const Range2T&) [with SequenceT = std::__cxx11::basic_string; Range1T = char [11]; Range2T = char [1]]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/io/stan_csv_reader.hpp:117:29: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:65:52: warning: 'this' pointer is null [-Wnonnull] 65 | static void failed() { ((Model*)0)->constraints(); } | ~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:26, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:16, from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string.hpp:23, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/io/stan_csv_reader.hpp:4, from F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:46: F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/concept.hpp:40:18: note: in a call to non-static member function 'void boost::algorithm::FinderConcept::constraints() [with FinderT = boost::algorithm::detail::first_finderF; IteratorT = __gnu_cxx::__normal_iterator >]' 40 | void constraints() | ^~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::constraint::failed() [with Model = boost::algorithm::FormatterConcept >, boost::algorithm::detail::first_finderF, __gnu_cxx::__normal_iterator > >]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/find_format.hpp:103:13: required from 'void boost::algorithm::find_format(SequenceT&, FinderT, FormatterT) [with SequenceT = std::__cxx11::basic_string; FinderT = detail::first_finderF; FormatterT = detail::const_formatF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/replace.hpp:179:44: required from 'void boost::algorithm::replace_first(SequenceT&, const Range1T&, const Range2T&) [with SequenceT = std::__cxx11::basic_string; Range1T = char [11]; Range2T = char [1]]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/io/stan_csv_reader.hpp:117:29: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:65:52: warning: 'this' pointer is null [-Wnonnull] 65 | static void failed() { ((Model*)0)->constraints(); } | ~~~~~~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/concept.hpp:65:18: note: in a call to non-static member function 'void boost::algorithm::FormatterConcept::constraints() [with FormatterT = boost::algorithm::detail::const_formatF >; FinderT = boost::algorithm::detail::first_finderF; IteratorT = __gnu_cxx::__normal_iterator >]' 65 | void constraints() | ^~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, -1, 1, false>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from 'class Eigen::VectorBlock, -1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:535:19: required from 'Eigen::ComputationInfo Eigen::internal::computeFromTridiagonal_impl(DiagType&, SubDiagType&, Eigen::Index, bool, MatrixType&) [with MatrixType = Eigen::Matrix; DiagType = Eigen::Matrix; SubDiagType = Eigen::Matrix; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:439:49: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_cholesky_factor.hpp:7, from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err.hpp:7: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_less_or_equal.hpp: In instantiation of 'static void stan::math::internal::less_or_equal::check(const char*, const char*, const T_y&, const T_high&) [with T_y = long long unsigned int; T_high = long long int; bool is_vec = false]': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_less_or_equal.hpp:74:74: required from 'void stan::math::check_less_or_equal(const char*, const char*, const T_y&, const T_high&) [with T_y = long long unsigned int; T_high = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/io/array_var_context.hpp:78:36: required from 'std::vector stan::io::array_var_context::validate_dims(const std::vector >&, T, const std::vector >&) [with T = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/io/array_var_context.hpp:117:48: required from here F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_less_or_equal.hpp:23:15: warning: comparison of integer expressions of different signedness: 'const long long unsigned int' and 'long long int' [-Wsign-compare] 23 | if (!(y <= high_vec[n])) { | ~~~^~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Matrix; Eigen::Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_max_op; Derived = Eigen::internal::redux_evaluator >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_max_op; Derived = Eigen::Matrix; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:438:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff() const [with Derived = Eigen::Matrix; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log_sum_exp.hpp:86:18: required from 'stan::math::log_sum_exp >(const Eigen::Matrix&):: [with auto:82 = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_vector_unary.hpp:103:13: required from 'static auto stan::math::apply_vector_unary::type>::value, void>::type>::reduce(const T&, const F&) [with F = stan::math::log_sum_exp >(const Eigen::Matrix&)::; T = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log_sum_exp.hpp:81:39: required from 'auto stan::math::log_sum_exp(const T&) [with T = Eigen::Matrix; stan::require_container_st* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/dirichlet_rng.hpp:59:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >; Eigen::Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log_sum_exp.hpp:90:26: required from 'stan::math::log_sum_exp >(const Eigen::Matrix&):: [with auto:82 = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/apply_vector_unary.hpp:103:13: required from 'static auto stan::math::apply_vector_unary::type>::value, void>::type>::reduce(const T&, const F&) [with F = stan::math::log_sum_exp >(const Eigen::Matrix&)::; T = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/log_sum_exp.hpp:81:39: required from 'auto stan::math::log_sum_exp(const T&) [with T = Eigen::Matrix; stan::require_container_st* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/dirichlet_rng.hpp:59:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/Core:496: F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of 'class Eigen::internal::gebp_traits': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:72:102: required from 'static void Eigen::internal::general_matrix_matrix_triangular_product::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, const ResScalar&, Eigen::internal::level3_blocking&) [with Index = long long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; int UpLo = 2; int Version = 0; ResScalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:113:12: required from 'static void Eigen::selfadjoint_product_selector::run(MatrixType&, const OtherType&, const typename MatrixType::Scalar&) [with MatrixType = Eigen::Matrix; OtherType = Eigen::Matrix; int UpLo = 2; typename MatrixType::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:126:62: required from 'Eigen::SelfAdjointView& Eigen::SelfAdjointView::rankUpdate(const Eigen::MatrixBase&, const Scalar&) [with DerivedU = Eigen::Matrix; _MatrixType = Eigen::Matrix; unsigned int UpLo = 2; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:33:78: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:391:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 391 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:392:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 392 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:393:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 393 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from 'class Eigen::Diagonal, -1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:447:40: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, -1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, 1, -1, false>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:508:91: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false>, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false>, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, -1, false>, 1, -1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from 'class Eigen::VectorBlock, 1, -1, false>, -1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:508:101: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs.hpp:191:25: required from 'int stan::optimization::BFGSMinimizer::step() [with FunctorType = stan::optimization::ModelAdaptor; QNUpdateType = stan::optimization::BFGSUpdate_HInv<>; Scalar = double; int DimAtCompile = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/bfgs.hpp:115:20: required from 'int stan::services::optimize::bfgs(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, double, double, double, double, double, double, int, bool, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:517:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:101:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:34:44: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:101:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:35:44: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/meta/is_base_pointer_convertible.hpp:29:17: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/meta/is_var_matrix.hpp:79:8: required from 'struct stan::is_any_var_matrix, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>, Eigen::Matrix, Eigen::Matrix, -1, 1, 0, -1, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/meta/return_var_matrix.hpp:22:7: required by substitution of 'template using return_var_matrix_t = std::conditional_t::value, stan::math::var_value::type, void>::type>, typename stan::math::promote_scalar_type, typename stan::plain_type::type, void>::type> [with ReturnType = const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>; Types = {Eigen::Matrix, Eigen::Matrix, -1, 1, 0, -1, 1>}]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:36:11: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:101:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:43:24: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:43:40: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:43:66: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0, 5>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:43:43: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:101:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:44:24: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, Eigen::CwiseUnaryOp, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >, Eigen::CwiseUnaryOp, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >, Eigen::CwiseUnaryOp, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> > >, Eigen::CwiseUnaryOp, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> > >, Eigen::CwiseUnaryOp, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::CwiseUnaryOp, -1, 1>, 0, Eigen::Stride<0, 0> > >::adj_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:44:54: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0, 5>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:47:38: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:48:54: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/meta/is_base_pointer_convertible.hpp:29:17: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/meta/is_var_matrix.hpp:79:8: required from 'struct stan::is_any_var_matrix, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0>, Eigen::Matrix, Eigen::Matrix, -1, 1, 0, -1, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/meta/return_var_matrix.hpp:22:7: required by substitution of 'template using return_var_matrix_t = std::conditional_t::value, stan::math::var_value::type, void>::type>, typename stan::math::promote_scalar_type, typename stan::plain_type::type, void>::type> [with ReturnType = const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0>; Types = {Eigen::Matrix, Eigen::Matrix, -1, 1, 0, -1, 1>}]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:55:11: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:57:53: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, Eigen::CwiseUnaryOp, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, Eigen::CwiseUnaryOp, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, Eigen::CwiseUnaryOp, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, Eigen::CwiseUnaryOp, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, Eigen::CwiseUnaryOp, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseUnaryOp, -1, 1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:57:37: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1> >&>(arena_matrix, -1, -1> >&)::::, const Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1> >&>(arena_matrix, -1, -1> >&)::::, const Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1> >&>(arena_matrix, -1, -1> >&)::::, const Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, -1, -1> >&>(arena_matrix, -1, -1> >&)::::, const Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, -1, -1> >&>(arena_matrix, -1, -1> >&)::::, const Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/value_of.hpp:58:75: required from 'stan::math::value_of, -1, -1> >&>(arena_matrix, -1, -1> >&):: [with auto:9 = stan::math::arena_matrix, -1, -1> >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/meta/holder.hpp:384:41: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:66:48: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/meta/is_base_pointer_convertible.hpp:29:17: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/meta/is_var_matrix.hpp:79:8: required from 'struct stan::is_any_var_matrix, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>, Eigen::Matrix, Eigen::Matrix, -1, 1, 0, -1, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/meta/return_var_matrix.hpp:22:7: required by substitution of 'template using return_var_matrix_t = std::conditional_t::value, stan::math::var_value::type, void>::type>, typename stan::math::promote_scalar_type, typename stan::plain_type::type, void>::type> [with ReturnType = const Eigen::Product, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>; Types = {Eigen::Matrix, Eigen::Matrix, -1, 1, 0, -1, 1>}]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:65:11: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:68:43: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:68:46: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1>&>(const Eigen::Matrix, -1, -1>&)::::, const Eigen::Matrix, -1, -1> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1>&>(const Eigen::Matrix, -1, -1>&)::::, const Eigen::Matrix, -1, -1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1>&>(const Eigen::Matrix, -1, -1>&)::::, const Eigen::Matrix, -1, -1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, -1, -1>&>(const Eigen::Matrix, -1, -1>&)::::, const Eigen::Matrix, -1, -1>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, -1, -1>&>(const Eigen::Matrix, -1, -1>&)::::, const Eigen::Matrix, -1, -1> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/value_of.hpp:58:75: required from 'stan::math::value_of, -1, -1>&>(const Eigen::Matrix, -1, -1>&):: [with auto:9 = const Eigen::Matrix, -1, -1>]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/meta/holder.hpp:384:41: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:53:61: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix, -1, -1>; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:746:17: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/model_header.hpp:8: F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/io/reader.hpp: In instantiation of 'T stan::io::reader::scalar() [with T = double]': stanExports_scmet.h:903:28: required from 'void model_scmet_namespace::model_scmet::write_array_impl(RNG&, VecR&, VecI&, VecVar&, bool, bool, std::ostream*) const [with RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; VecR = std::vector; VecI = std::vector; VecVar = std::vector; stan::require_vector_like_vt* = 0; stan::require_vector_like_vt* = 0; stan::require_std_vector_vt* = 0; std::ostream = std::basic_ostream]' stanExports_scmet.h:1362:23: required from 'void model_scmet_namespace::model_scmet::write_array(RNG&, std::vector&, std::vector&, std::vector&, bool, bool, std::ostream*) const [with RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1105:23: required from 'SEXPREC* rstan::stan_fit::constrain_pars(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:26:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/io/reader.hpp:139:14: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'Eigen::EigenBase, 0, Eigen::Stride<0, 0> > >::Index' {aka 'long long int'} [-Wsign-compare] 139 | if (pos_ >= data_r_.size()) { | ~~~~~^~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, true>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, 1, true, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1307:33: required from 'const Eigen::internal::evaluator >::Scalar Eigen::internal::evaluator >::coeff(Eigen::Index, Eigen::Index) const [with ArgType = const Eigen::Matrix; MemberOp = Eigen::internal::member_lpnorm<1, double>; int Direction = 0; Scalar = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:381:29: required from 'Eigen::internal::redux_evaluator<_XprType>::CoeffReturnType Eigen::internal::redux_evaluator<_XprType>::coeffByOuterInner(Eigen::Index, Eigen::Index) const [with _XprType = Eigen::PartialReduxExpr, Eigen::internal::member_lpnorm<1, double>, 0>; CoeffReturnType = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:194:32: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_max_op; Derived = Eigen::internal::redux_evaluator, Eigen::internal::member_lpnorm<1, double>, 0> >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_max_op; Derived = Eigen::PartialReduxExpr, Eigen::internal::member_lpnorm<1, double>, 0>; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:438:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff() const [with Derived = Eigen::PartialReduxExpr, Eigen::internal::member_lpnorm<1, double>, 0>; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/matrix_exp_action_handler.hpp:35:44: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of 'void Eigen::internal::gemm_pack_rhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long long int; DataMapper = Eigen::internal::const_blas_data_mapper; int nr = 4; bool Conjugate = false; bool PanelMode = false]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:100:15: required from 'static void Eigen::internal::general_matrix_matrix_triangular_product::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, const ResScalar&, Eigen::internal::level3_blocking&) [with Index = long long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; int UpLo = 2; int Version = 0; ResScalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:113:12: required from 'static void Eigen::selfadjoint_product_selector::run(MatrixType&, const OtherType&, const typename MatrixType::Scalar&) [with MatrixType = Eigen::Matrix; OtherType = Eigen::Matrix; int UpLo = 2; typename MatrixType::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:126:62: required from 'Eigen::SelfAdjointView& Eigen::SelfAdjointView::rankUpdate(const Eigen::MatrixBase&, const Scalar&) [with DerivedU = Eigen::Matrix; _MatrixType = Eigen::Matrix; unsigned int UpLo = 2; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:33:78: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1981:62: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 1981 | PacketBlock kernel; | ^~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of 'void Eigen::internal::gemm_pack_lhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long long int; DataMapper = Eigen::internal::const_blas_data_mapper; int Pack1 = 4; int Pack2 = 2; bool Conjugate = false; bool PanelMode = false]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:106:17: required from 'static void Eigen::internal::general_matrix_matrix_triangular_product::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, const ResScalar&, Eigen::internal::level3_blocking&) [with Index = long long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; int UpLo = 2; int Version = 0; ResScalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:113:12: required from 'static void Eigen::selfadjoint_product_selector::run(MatrixType&, const OtherType&, const typename MatrixType::Scalar&) [with MatrixType = Eigen::Matrix; OtherType = Eigen::Matrix; int UpLo = 2; typename MatrixType::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:126:62: required from 'Eigen::SelfAdjointView& Eigen::SelfAdjointView::rankUpdate(const Eigen::MatrixBase&, const Scalar&) [with DerivedU = Eigen::Matrix; _MatrixType = Eigen::Matrix; unsigned int UpLo = 2; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:33:78: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1847:33: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 1847 | PacketBlock kernel; | ^~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1847:33: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of 'void Eigen::internal::gebp_kernel::operator()(const DataMapper&, const LhsScalar*, const RhsScalar*, Index, Index, Index, ResScalar, Index, Index, Index, Index) [with LhsScalar = double; RhsScalar = double; Index = long long int; DataMapper = Eigen::internal::blas_data_mapper; int mr = 4; int nr = 4; bool ConjugateLhs = false; bool ConjugateRhs = false; ResScalar = double]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:113:15: required from 'static void Eigen::internal::general_matrix_matrix_triangular_product::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, const ResScalar&, Eigen::internal::level3_blocking&) [with Index = long long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; int UpLo = 2; int Version = 0; ResScalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:113:12: required from 'static void Eigen::selfadjoint_product_selector::run(MatrixType&, const OtherType&, const typename MatrixType::Scalar&) [with MatrixType = Eigen::Matrix; OtherType = Eigen::Matrix; int UpLo = 2; typename MatrixType::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:126:62: required from 'Eigen::SelfAdjointView& Eigen::SelfAdjointView::rankUpdate(const Eigen::MatrixBase&, const Scalar&) [with DerivedU = Eigen::Matrix; _MatrixType = Eigen::Matrix; unsigned int UpLo = 2; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:33:78: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1537:103: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 1537 | const int SResPacketHalfSize = unpacket_traits::half>::size; | ^~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1592:135: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 1592 | typedef typename conditional=8,typename unpacket_traits::half,SResPacket>::type SResPacketHalf; | ^~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1593:135: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 1593 | typedef typename conditional=8,typename unpacket_traits::half,SLhsPacket>::type SLhsPacketHalf; | ^~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1594:135: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 1594 | typedef typename conditional=8,typename unpacket_traits::half,SRhsPacket>::type SRhsPacketHalf; | ^~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1595:135: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 1595 | typedef typename conditional=8,typename unpacket_traits::half,SAccPacket>::type SAccPacketHalf; | ^~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:155:52: required from 'void Eigen::internal::tribb_kernel::operator()(ResScalar*, Index, Index, const LhsScalar*, const RhsScalar*, Index, Index, const ResScalar&) [with LhsScalar = double; RhsScalar = double; Index = long long int; int mr = 4; int nr = 4; bool ConjLhs = false; bool ConjRhs = false; int ResInnerStride = 1; int UpLo = 2; ResScalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:116:13: required from 'static void Eigen::internal::general_matrix_matrix_triangular_product::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, const ResScalar&, Eigen::internal::level3_blocking&) [with Index = long long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; int UpLo = 2; int Version = 0; ResScalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:113:12: required from 'static void Eigen::selfadjoint_product_selector::run(MatrixType&, const OtherType&, const typename MatrixType::Scalar&) [with MatrixType = Eigen::Matrix; OtherType = Eigen::Matrix; int UpLo = 2; typename MatrixType::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:126:62: required from 'Eigen::SelfAdjointView& Eigen::SelfAdjointView::rankUpdate(const Eigen::MatrixBase&, const Scalar&) [with DerivedU = Eigen::Matrix; _MatrixType = Eigen::Matrix; unsigned int UpLo = 2; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:33:78: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:116:13: required from 'static void Eigen::internal::general_matrix_matrix_triangular_product::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, const ResScalar&, Eigen::internal::level3_blocking&) [with Index = long long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; int UpLo = 2; int Version = 0; ResScalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:113:12: required from 'static void Eigen::selfadjoint_product_selector::run(MatrixType&, const OtherType&, const typename MatrixType::Scalar&) [with MatrixType = Eigen::Matrix; OtherType = Eigen::Matrix; int UpLo = 2; typename MatrixType::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:126:62: required from 'Eigen::SelfAdjointView& Eigen::SelfAdjointView::rankUpdate(const Eigen::MatrixBase&, const Scalar&) [with DerivedU = Eigen::Matrix; _MatrixType = Eigen::Matrix; unsigned int UpLo = 2; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:33:78: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:368:46: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, 1>, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, 1>, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, 1>, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, -1, -1, false>, 1>, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, -1, -1, false>, 1>, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, -1, -1, false>, 1>, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:368:35: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/Core:445: F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:71:51: required from 'class Eigen::internal::visitor_evaluator, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:110:17: required from 'void Eigen::DenseBase::visit(Visitor&) const [with Visitor = Eigen::internal::min_coeff_visitor, -1, 1, false> >; Derived = Eigen::Block, -1, 1, false>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:229:14: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::minCoeff(IndexType*) const [with IndexType = long long int; Derived = Eigen::Block, -1, 1, false>; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:535:35: required from 'Eigen::ComputationInfo Eigen::internal::computeFromTridiagonal_impl(DiagType&, SubDiagType&, Eigen::Index, bool, MatrixType&) [with MatrixType = Eigen::Matrix; DiagType = Eigen::Matrix; SubDiagType = Eigen::Matrix; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:439:49: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Eigen::Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Matrix > >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Matrix; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/variance.hpp:28:37: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0>, -1, 1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:319:26: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, 0>, -1, 1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, 0>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, 0>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 0>, -1, 1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Block, 0>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:319:43: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:346:35: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, 1, -1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:352:80: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:352:67: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:121:7: required from 'class Eigen::internal::dense_product_base, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, 6>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:353:35: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, -1, -1, false>, Eigen::Block, -1, 1, false>, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, -1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:355:32: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, -1, 1, true>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:373:56: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false> >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:381:32: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs_linesearch.hpp:247:23: required from 'int stan::optimization::WolfeLineSearch(FunctorType&, Scalar&, XType&, Scalar&, XType&, const XType&, const XType&, const Scalar&, const XType&, const Scalar&, const Scalar&, const Scalar&, const Scalar&, const Scalar&) [with FunctorType = ModelAdaptor; Scalar = double; XType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs.hpp:209:28: required from 'int stan::optimization::BFGSMinimizer::step() [with FunctorType = stan::optimization::ModelAdaptor; QNUpdateType = stan::optimization::BFGSUpdate_HInv<>; Scalar = double; int DimAtCompile = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/bfgs.hpp:115:20: required from 'int stan::services::optimize::bfgs(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, double, double, double, double, double, double, int, bool, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:517:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs_update.hpp:34:78: required from 'Scalar stan::optimization::BFGSUpdate_HInv::update(const VectorT&, const VectorT&, bool) [with Scalar = double; int DimAtCompile = -1; VectorT = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs.hpp:246:33: required from 'int stan::optimization::BFGSMinimizer::step() [with FunctorType = stan::optimization::ModelAdaptor; QNUpdateType = stan::optimization::BFGSUpdate_HInv<>; Scalar = double; int DimAtCompile = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/bfgs.hpp:115:20: required from 'int stan::services::optimize::bfgs(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, double, double, double, double, double, double, int, bool, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:517:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Transpose >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Transpose >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Transpose >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Transpose >, 0, 5>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Transpose >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Transpose >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs_update.hpp:34:64: required from 'Scalar stan::optimization::BFGSUpdate_HInv::update(const VectorT&, const VectorT&, bool) [with Scalar = double; int DimAtCompile = -1; VectorT = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs.hpp:246:33: required from 'int stan::optimization::BFGSMinimizer::step() [with FunctorType = stan::optimization::ModelAdaptor; QNUpdateType = stan::optimization::BFGSUpdate_HInv<>; Scalar = double; int DimAtCompile = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/bfgs.hpp:115:20: required from 'int stan::services::optimize::bfgs(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, double, double, double, double, double, double, int, bool, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:517:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, Eigen::Matrix >, const Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Transpose >, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, Eigen::Matrix >, const Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Transpose >, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, Eigen::Matrix >, const Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Transpose >, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, Eigen::Matrix >, const Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Transpose >, 0>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, Eigen::Matrix >, const Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Transpose >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs_update.hpp:34:52: required from 'Scalar stan::optimization::BFGSUpdate_HInv::update(const VectorT&, const VectorT&, bool) [with Scalar = double; int DimAtCompile = -1; VectorT = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs.hpp:246:33: required from 'int stan::optimization::BFGSMinimizer::step() [with FunctorType = stan::optimization::ModelAdaptor; QNUpdateType = stan::optimization::BFGSUpdate_HInv<>; Scalar = double; int DimAtCompile = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/bfgs.hpp:115:20: required from 'int stan::services::optimize::bfgs(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, double, double, double, double, double, double, int, bool, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:517:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Transpose >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Transpose >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Transpose >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Transpose >, 0, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Transpose >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Transpose >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs_update.hpp:37:47: required from 'Scalar stan::optimization::BFGSUpdate_HInv::update(const VectorT&, const VectorT&, bool) [with Scalar = double; int DimAtCompile = -1; VectorT = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs.hpp:246:33: required from 'int stan::optimization::BFGSMinimizer::step() [with FunctorType = stan::optimization::ModelAdaptor; QNUpdateType = stan::optimization::BFGSUpdate_HInv<>; Scalar = double; int DimAtCompile = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/bfgs.hpp:115:20: required from 'int stan::services::optimize::bfgs(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, double, double, double, double, double, double, int, bool, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:517:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 0>, Eigen::Transpose >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 0>, Eigen::Transpose >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 0>, Eigen::Transpose >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 0>, Eigen::Transpose >, 0, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 0>, Eigen::Transpose >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 0>, Eigen::Transpose >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs_update.hpp:40:24: required from 'Scalar stan::optimization::BFGSUpdate_HInv::update(const VectorT&, const VectorT&, bool) [with Scalar = double; int DimAtCompile = -1; VectorT = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs.hpp:246:33: required from 'int stan::optimization::BFGSMinimizer::step() [with FunctorType = stan::optimization::ModelAdaptor; QNUpdateType = stan::optimization::BFGSUpdate_HInv<>; Scalar = double; int DimAtCompile = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/bfgs.hpp:115:20: required from 'int stan::services::optimize::bfgs(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, double, double, double, double, double, double, int, bool, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:517:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Product, Eigen::Matrix, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Product, Eigen::Matrix, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Product, Eigen::Matrix, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Product, Eigen::Matrix, 0>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Product, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs_update.hpp:55:20: required from 'void stan::optimization::BFGSUpdate_HInv::search_direction(VectorT&, const VectorT&) const [with Scalar = double; int DimAtCompile = -1; VectorT = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs.hpp:254:25: required from 'int stan::optimization::BFGSMinimizer::step() [with FunctorType = stan::optimization::ModelAdaptor; QNUpdateType = stan::optimization::BFGSUpdate_HInv<>; Scalar = double; int DimAtCompile = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/bfgs.hpp:115:20: required from 'int stan::services::optimize::bfgs(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, double, double, double, double, double, double, int, bool, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:517:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/io/reader.hpp: In instantiation of 'T stan::io::reader::scalar() [with T = stan::math::var_value]': stanExports_scmet.h:710:28: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/io/reader.hpp:139:14: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'Eigen::EigenBase, -1, 1>, 0, Eigen::Stride<0, 0> > >::Index' {aka 'long long int'} [-Wsign-compare] 139 | if (pos_ >= data_r_.size()) { | ~~~~~^~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1> >&>(const Eigen::ArrayWrapper, -1, 1> >&)::::, const Eigen::ArrayWrapper, -1, 1> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1> >&>(const Eigen::ArrayWrapper, -1, 1> >&)::::, const Eigen::ArrayWrapper, -1, 1> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, -1, 1> >&>(const Eigen::ArrayWrapper, -1, 1> >&)::::, const Eigen::ArrayWrapper, -1, 1> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, -1, 1> >&>(const Eigen::ArrayWrapper, -1, 1> >&)::::, const Eigen::ArrayWrapper, -1, 1> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, -1, 1> >&>(const Eigen::ArrayWrapper, -1, 1> >&)::::, const Eigen::ArrayWrapper, -1, 1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/value_of.hpp:58:75: required from 'stan::math::value_of, -1, 1> >&>(const Eigen::ArrayWrapper, -1, 1> >&):: [with auto:9 = const Eigen::ArrayWrapper, -1, 1> >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/meta/holder.hpp:384:41: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:65:31: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = true; T_y = Eigen::Matrix, -1, 1>; T_loc = Eigen::Matrix; T_scale = double; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = var_value]' stanExports_scmet.h:805:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::ArrayWrapper > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::ArrayWrapper >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::ArrayWrapper > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:85:40: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = true; T_y = Eigen::Matrix, -1, 1>; T_loc = Eigen::Matrix; T_scale = double; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = var_value]' stanExports_scmet.h:805:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::ArrayWrapper > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::ArrayWrapper > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::ArrayWrapper > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::ArrayWrapper > >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::ArrayWrapper > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:85:50: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = true; T_y = Eigen::Matrix, -1, 1>; T_loc = Eigen::Matrix; T_scale = double; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = var_value]' stanExports_scmet.h:805:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::Array >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::Array, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:87:62: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = true; T_y = Eigen::Matrix, -1, 1>; T_loc = Eigen::Matrix; T_scale = double; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = var_value]' stanExports_scmet.h:805:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:102:57: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = true; T_y = Eigen::Matrix, -1, 1>; T_loc = Eigen::Matrix; T_scale = double; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = var_value]' stanExports_scmet.h:805:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:104:39: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = true; T_y = Eigen::Matrix, -1, 1>; T_loc = Eigen::Matrix; T_scale = double; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = var_value]' stanExports_scmet.h:805:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:107:49: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = true; T_y = Eigen::Matrix, -1, 1>; T_loc = Eigen::Matrix; T_scale = double; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = var_value]' stanExports_scmet.h:805:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:107:63: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = true; T_y = Eigen::Matrix, -1, 1>; T_loc = Eigen::Matrix; T_scale = double; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = var_value]' stanExports_scmet.h:805:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:85:50: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = true; T_y = Eigen::Matrix, -1, 1>; T_loc = Eigen::Matrix, -1, 1>; T_scale = double; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = var_value]' stanExports_scmet.h:809:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:107:63: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = true; T_y = Eigen::Matrix, -1, 1>; T_loc = Eigen::Matrix, -1, 1>; T_scale = var_value; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = var_value]' stanExports_scmet.h:811:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Eigen::Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_max_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Matrix > >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_max_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:438:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:433:45: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, -1, 1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, -1, 1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, -1, 1, false>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true>, -1, 1, false>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, true>, -1, 1, false>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, true>, -1, 1, false>, -1, 1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:361:59: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, true> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:266:7: required from 'Eigen::MapBase::ScalarWithConstIfNotLvalue& Eigen::MapBase::coeffRef(Eigen::Index) [with Derived = Eigen::Block, -1, 1, true>; ScalarWithConstIfNotLvalue = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:365:25: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, 1, true> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Jacobi/Jacobi.h:454:5: required from 'void Eigen::internal::apply_rotation_in_the_plane(Eigen::DenseBase&, Eigen::DenseBase&, const Eigen::JacobiRotation&) [with VectorX = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>; VectorY = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>; OtherScalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Jacobi/Jacobi.h:296:40: required from 'void Eigen::MatrixBase::applyOnTheRight(Eigen::Index, Eigen::Index, const Eigen::JacobiRotation&) [with OtherScalar = double; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:862:24: required from 'void Eigen::internal::tridiagonal_qr_step(RealScalar*, RealScalar*, Index, Index, Scalar*, Index) [with int StorageOrder = 0; RealScalar = double; Scalar = double; Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:520:87: required from 'Eigen::ComputationInfo Eigen::internal::computeFromTridiagonal_impl(DiagType&, SubDiagType&, Eigen::Index, bool, MatrixType&) [with MatrixType = Eigen::Matrix; DiagType = Eigen::Matrix; SubDiagType = Eigen::Matrix; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:439:49: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, -1, 1, true>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, -1, 1, true>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, 1, true>, -1, 1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:22: required from 'static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::lpNorm() const [with int p = 1; Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:508:74: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, 1, -1, false>, 1, -1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, 1, -1, false>, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, 1, -1, false>, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 1, -1, false>, 1, -1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false>, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:22: required from 'static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::lpNorm() const [with int p = 1; Derived = Eigen::Block, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:508:125: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1338:41: required from 'struct Eigen::internal::evaluator_wrapper_base, -1, 1, true>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1416:8: required from 'struct Eigen::internal::unary_evaluator, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from 'struct Eigen::internal::binary_evaluator, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:373:74: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1338:41: required from 'struct Eigen::internal::evaluator_wrapper_base, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1416:8: required from 'struct Eigen::internal::unary_evaluator, -1, 1, false> >, Eigen::internal::IndexBased, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from 'struct Eigen::internal::binary_evaluator, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:381:50: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:85:40: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = false; T_y = Eigen::Matrix; T_loc = Eigen::Matrix; T_scale = double; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = double]' stanExports_scmet.h:805:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = false; bool jacobian__ = false; VecR = std::vector; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = double; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = false; bool jacobian__ = false; T__ = double; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/newton.hpp:55:47: required from 'int stan::services::optimize::newton(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, bool, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:502:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:85:50: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = false; T_y = Eigen::Matrix; T_loc = Eigen::Matrix; T_scale = double; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = double]' stanExports_scmet.h:805:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = false; bool jacobian__ = false; VecR = std::vector; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = double; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = false; bool jacobian__ = false; T__ = double; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/newton.hpp:55:47: required from 'int stan::services::optimize::newton(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, bool, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:502:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Matrix, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:44: required from 'static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Matrix; U = Eigen::Matrix; bool NeedToTranspose = false; ResScalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from 'typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType Eigen::MatrixBase::dot(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Matrix; Derived = Eigen::Matrix; typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType = double; typename Eigen::internal::traits::Scalar = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs.hpp:199:45: required from 'int stan::optimization::BFGSMinimizer::step() [with FunctorType = stan::optimization::ModelAdaptor; QNUpdateType = stan::optimization::BFGSUpdate_HInv<>; Scalar = double; int DimAtCompile = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/bfgs.hpp:115:20: required from 'int stan::services::optimize::bfgs(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, double, double, double, double, double, double, int, bool, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:517:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::constraint::failed() [with Model = boost::algorithm::FinderConcept >, __gnu_cxx::__normal_iterator > >]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:81:13: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:65:52: warning: 'this' pointer is null [-Wnonnull] 65 | static void failed() { ((Model*)0)->constraints(); } | ~~~~~~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/concept.hpp:40:18: note: in a call to non-static member function 'void boost::algorithm::FinderConcept::constraints() [with FinderT = boost::algorithm::detail::token_finderF >; IteratorT = __gnu_cxx::__normal_iterator >]' 40 | void constraints() | ^~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from 'Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:116:13: required from 'static void Eigen::internal::general_matrix_matrix_triangular_product::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, const ResScalar&, Eigen::internal::level3_blocking&) [with Index = long long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; int UpLo = 2; int Version = 0; ResScalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:113:12: required from 'static void Eigen::selfadjoint_product_selector::run(MatrixType&, const OtherType&, const typename MatrixType::Scalar&) [with MatrixType = Eigen::Matrix; OtherType = Eigen::Matrix; int UpLo = 2; typename MatrixType::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:126:62: required from 'Eigen::SelfAdjointView& Eigen::SelfAdjointView::rankUpdate(const Eigen::MatrixBase&, const Scalar&) [with DerivedU = Eigen::Matrix; _MatrixType = Eigen::Matrix; unsigned int UpLo = 2; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:33:78: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, -1, 1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, -1, 1, false>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true>, -1, 1, false>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, true>, -1, 1, false>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, true>, -1, 1, false>, -1, 1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, 1, true>, -1, 1, false>, -1, 1, false, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:361:59: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:91:22: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:361:59: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, false>, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, -1, 1, false>, const Eigen::Block, -1, 1, true>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, -1, 1, false>, const Eigen::Block, -1, 1, true>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Block, -1, 1, false>, const Eigen::Block, -1, 1, true>, -1, 1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, false>, const Eigen::Block, -1, 1, true>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:44: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:370:86: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false>, -1, 1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, -1, 1, false>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, false>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, false>, -1, 1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, 1, false>, -1, 1, false, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:373:18: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false>, -1, 1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false>, -1, 1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointRank2Update.h:33:74: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:373:18: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointRank2Update.h:34:60: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:373:18: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false>, -1, 1, false> >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false>, -1, 1, false> >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false>, -1, 1, false> >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false>, -1, 1, false> >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false>, -1, 1, false> >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointRank2Update.h:34:23: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:373:18: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:69:58: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvectors_sym.hpp:75:77: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 0>, -1, 1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 0>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from 'struct Eigen::internal::unary_evaluator, const Eigen::Block, 0>, -1, 1, false> >, Eigen::internal::IndexBased, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block, 0>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:71:51: required from 'class Eigen::internal::visitor_evaluator, const Eigen::Block, 0>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:110:17: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:319:54: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:131:44: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:353:56: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 2>, Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, 2>, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, 2>, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from 'class Eigen::SolveImpl >, 2>, Eigen::Matrix, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from 'class Eigen::Solve >, 2>, Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:53:48: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/families/normal_meanfield.hpp:388:57: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/advi.hpp:223:11: required from 'double stan::variational::advi::adapt_eta(Q&, int, stan::callbacks::logger&) const [with Model = model_scmet_namespace::model_scmet; Q = stan::variational::normal_meanfield; BaseRNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/variational/advi.hpp:468:13: required from 'int stan::variational::advi::run(double, bool, int, double, int, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) const [with Model = model_scmet_namespace::model_scmet; Q = stan::variational::normal_meanfield; BaseRNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/experimental/advi/meanfield.hpp:82:15: required from 'int stan::services::experimental::advi::meanfield(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, double, double, bool, int, int, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:900:18: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/elementwise_check.hpp: In instantiation of 'void stan::math::elementwise_check(const F&, const char*, const char*, const T&, const char*, const Indexings& ...) [with F = check_not_nan >(const char*, const char*, const Eigen::Array&)::; T = Eigen::Array; Indexings = {}; stan::require_eigen_t* = 0; std::enable_if_t<((Eigen::internal::traits<_Rhs>::Flags & Eigen::LinearAccessBit) || T::IsVectorAtCompileTime)>* = 0]': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_not_nan.hpp:28:20: required from 'void stan::math::check_not_nan(const char*, const char*, const T_y&) [with T_y = Eigen::Array]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:69:16: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = true; T_y = Eigen::Matrix, -1, 1>; T_loc = Eigen::Matrix; T_scale = double; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = var_value]' stanExports_scmet.h:805:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/elementwise_check.hpp:158:24: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'Eigen::EigenBase >::Index' {aka 'long long int'} [-Wsign-compare] 158 | for (size_t i = 0; i < x.size(); i++) { | ~~^~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/elementwise_check.hpp: In instantiation of 'void stan::math::elementwise_check(const F&, const char*, const char*, const T&, const char*, const Indexings& ...) [with F = check_finite > >(const char*, const char*, const Eigen::ArrayWrapper >&)::; T = Eigen::ArrayWrapper >; Indexings = {}; stan::require_eigen_t* = 0; std::enable_if_t<((Eigen::internal::traits<_Rhs>::Flags & Eigen::LinearAccessBit) || T::IsVectorAtCompileTime)>* = 0]': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_finite.hpp:29:20: required from 'void stan::math::check_finite(const char*, const char*, const T_y&) [with T_y = Eigen::ArrayWrapper >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:70:15: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = true; T_y = Eigen::Matrix, -1, 1>; T_loc = Eigen::Matrix; T_scale = double; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = var_value]' stanExports_scmet.h:805:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/elementwise_check.hpp:158:24: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'Eigen::EigenBase > >::Index' {aka 'long long int'} [-Wsign-compare] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/elementwise_check.hpp: In instantiation of 'void stan::math::elementwise_check(const F&, const char*, const char*, const T&, const char*, const Indexings& ...) [with F = check_finite >(const char*, const char*, const Eigen::Array&)::; T = Eigen::Array; Indexings = {}; stan::require_eigen_t* = 0; std::enable_if_t<((Eigen::internal::traits<_Rhs>::Flags & Eigen::LinearAccessBit) || T::IsVectorAtCompileTime)>* = 0]': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_finite.hpp:29:20: required from 'void stan::math::check_finite(const char*, const char*, const T_y&) [with T_y = Eigen::Array]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:70:15: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = true; T_y = Eigen::Matrix, -1, 1>; T_loc = Eigen::Matrix, -1, 1>; T_scale = double; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = var_value]' stanExports_scmet.h:809:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/elementwise_check.hpp:158:24: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'Eigen::EigenBase >::Index' {aka 'long long int'} [-Wsign-compare] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, -1, 1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, -1, 1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, 1, true>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:22: required from 'static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, -1, 1, true>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1307:23: required from 'const Eigen::internal::evaluator >::Scalar Eigen::internal::evaluator >::coeff(Eigen::Index, Eigen::Index) const [with ArgType = const Eigen::Matrix; MemberOp = Eigen::internal::member_lpnorm<1, double>; int Direction = 0; Scalar = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:381:29: required from 'Eigen::internal::redux_evaluator<_XprType>::CoeffReturnType Eigen::internal::redux_evaluator<_XprType>::coeffByOuterInner(Eigen::Index, Eigen::Index) const [with _XprType = Eigen::PartialReduxExpr, Eigen::internal::member_lpnorm<1, double>, 0>; CoeffReturnType = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:194:32: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_max_op; Derived = Eigen::internal::redux_evaluator, Eigen::internal::member_lpnorm<1, double>, 0> >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_max_op; Derived = Eigen::PartialReduxExpr, Eigen::internal::member_lpnorm<1, double>, 0>; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:438:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff() const [with Derived = Eigen::PartialReduxExpr, Eigen::internal::member_lpnorm<1, double>, 0>; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/matrix_exp_action_handler.hpp:35:44: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, 1, -1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 1, -1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:22: required from 'static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1309:23: required from 'const Eigen::internal::evaluator >::Scalar Eigen::internal::evaluator >::coeff(Eigen::Index, Eigen::Index) const [with ArgType = const Eigen::Matrix; MemberOp = Eigen::internal::member_lpnorm<1, double>; int Direction = 0; Scalar = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:381:29: required from 'Eigen::internal::redux_evaluator<_XprType>::CoeffReturnType Eigen::internal::redux_evaluator<_XprType>::coeffByOuterInner(Eigen::Index, Eigen::Index) const [with _XprType = Eigen::PartialReduxExpr, Eigen::internal::member_lpnorm<1, double>, 0>; CoeffReturnType = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:194:32: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_max_op; Derived = Eigen::internal::redux_evaluator, Eigen::internal::member_lpnorm<1, double>, 0> >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_max_op; Derived = Eigen::PartialReduxExpr, Eigen::internal::member_lpnorm<1, double>, 0>; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:438:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff() const [with Derived = Eigen::PartialReduxExpr, Eigen::internal::member_lpnorm<1, double>, 0>; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/matrix_exp_action_handler.hpp:35:44: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Transpose >, 1>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Transpose >, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Transpose >, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Transpose >, 1, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Transpose >, 1, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Transpose >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:29:18: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:76:71: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:361:59: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, -1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:961:41: required from 'struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from 'struct Eigen::internal::unary_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::lpNorm() const [with int p = 1; Derived = Eigen::Block, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:508:125: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from 'struct Eigen::internal::unary_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false>, 1, -1, false> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::lpNorm() const [with int p = 1; Derived = Eigen::Block, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:508:125: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, -1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:369:102: required from 'struct Eigen::internal::plain_object_eval, -1, -1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from 'struct Eigen::internal::generic_product_impl, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from 'static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:58:31: required from 'ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:355:25: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/elementwise_check.hpp: In instantiation of 'void stan::math::elementwise_check(const F&, const char*, const char*, const T&, const char*, const Indexings& ...) [with F = check_not_nan > >(const char*, const char*, const Eigen::ArrayWrapper >&)::; T = Eigen::ArrayWrapper >; Indexings = {}; stan::require_eigen_t* = 0; std::enable_if_t<((Eigen::internal::traits<_Rhs>::Flags & Eigen::LinearAccessBit) || T::IsVectorAtCompileTime)>* = 0]': F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_not_nan.hpp:28:20: required from 'void stan::math::check_not_nan(const char*, const char*, const T_y&) [with T_y = Eigen::ArrayWrapper >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:69:16: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = false; T_y = Eigen::Matrix; T_loc = Eigen::Matrix; T_scale = double; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = double]' stanExports_scmet.h:805:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = false; bool jacobian__ = false; VecR = std::vector; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = double; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = false; bool jacobian__ = false; T__ = double; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/newton.hpp:55:47: required from 'int stan::services::optimize::newton(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, bool, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:502:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/elementwise_check.hpp:158:24: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'Eigen::EigenBase > >::Index' {aka 'long long int'} [-Wsign-compare] 158 | for (size_t i = 0; i < x.size(); i++) { | ~~^~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, -1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose >; SrcXprType = Eigen::Block, 1, -1, false>; Functor = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose >; SrcXprType = Eigen::Block, 1, -1, false>; Functor = Eigen::internal::assign_op; Weak = void]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Block, 1, -1, false>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, 1, -1, false>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, 1, -1, false>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Block, 1, -1, false>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:111:35: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/Core:499: F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of 'struct Eigen::internal::general_matrix_vector_product, 1, false, double, Eigen::internal::const_blas_data_mapper, false, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:339:132: required from 'static void Eigen::internal::gemv_dense_selector<2, 1, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; typename Dest::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from 'static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; Derived = Eigen::internal::generic_product_impl >, Eigen::Matrix, Eigen::DenseShape, Eigen::DenseShape, 7>; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from 'static void Eigen::internal::generic_product_impl_base::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; Derived = Eigen::internal::generic_product_impl >, Eigen::Matrix, Eigen::DenseShape, Eigen::DenseShape, 7>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; int Options = 0; Scalar = double; SrcXprType = Eigen::Product >, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product >, Eigen::Matrix, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product >, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product >, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product >, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/newton.hpp:22:58: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:351:71: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 351 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:352:71: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 352 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:353:71: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 353 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, true>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; int Options = 0; Scalar = double; SrcXprType = Eigen::Product >, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product >, Eigen::Matrix, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product >, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product >, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product >, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/newton.hpp:22:58: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, true> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from 'struct Eigen::internal::unary_evaluator, const Eigen::Block, -1, 1, true> >, Eigen::internal::IndexBased, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block, -1, 1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1307:23: required from 'const Eigen::internal::evaluator >::Scalar Eigen::internal::evaluator >::coeff(Eigen::Index, Eigen::Index) const [with ArgType = const Eigen::Matrix; MemberOp = Eigen::internal::member_lpnorm<1, double>; int Direction = 0; Scalar = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:381:29: required from 'Eigen::internal::redux_evaluator<_XprType>::CoeffReturnType Eigen::internal::redux_evaluator<_XprType>::coeffByOuterInner(Eigen::Index, Eigen::Index) const [with _XprType = Eigen::PartialReduxExpr, Eigen::internal::member_lpnorm<1, double>, 0>; CoeffReturnType = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:194:32: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_max_op; Derived = Eigen::internal::redux_evaluator, Eigen::internal::member_lpnorm<1, double>, 0> >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_max_op; Derived = Eigen::PartialReduxExpr, Eigen::internal::member_lpnorm<1, double>, 0>; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:438:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff() const [with Derived = Eigen::PartialReduxExpr, Eigen::internal::member_lpnorm<1, double>, 0>; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/matrix_exp_action_handler.hpp:35:44: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false>, -1, 1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from 'struct Eigen::internal::unary_evaluator, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >, Eigen::internal::IndexBased, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:361:59: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of 'static void Eigen::internal::general_matrix_vector_product::run(Index, Index, const LhsMapper&, const RhsMapper&, ResScalar*, Index, ResScalar) [with Index = long long int; LhsScalar = double; LhsMapper = Eigen::internal::const_blas_data_mapper; bool ConjugateLhs = false; RhsScalar = double; RhsMapper = Eigen::internal::const_blas_data_mapper; bool ConjugateRhs = false; int Version = 0; ResScalar = double]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:339:132: required from 'static void Eigen::internal::gemv_dense_selector<2, 1, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; typename Dest::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from 'static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; Derived = Eigen::internal::generic_product_impl >, Eigen::Matrix, Eigen::DenseShape, Eigen::DenseShape, 7>; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from 'static void Eigen::internal::generic_product_impl_base::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; Derived = Eigen::internal::generic_product_impl >, Eigen::Matrix, Eigen::DenseShape, Eigen::DenseShape, 7>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; int Options = 0; Scalar = double; SrcXprType = Eigen::Product >, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product >, Eigen::Matrix, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product >, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product >, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product >, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/newton.hpp:22:58: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:385:62: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 385 | conj_helper pcj; | ^~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:385:62: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; Eigen::Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true>, -1, 1, false> > >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:28: required from 'static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::lpNorm() const [with int p = 1; Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:508:74: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:54: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Block, 1, -1, false>; Rhs = Eigen::Block, -1, 1, false>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:353:56: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >; Eigen::Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Matrix, const Eigen::Matrix > >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:51: required from 'static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Matrix; U = Eigen::Matrix; bool NeedToTranspose = false; ResScalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from 'typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType Eigen::MatrixBase::dot(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Matrix; Derived = Eigen::Matrix; typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType = double; typename Eigen::internal::traits::Scalar = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs.hpp:199:45: required from 'int stan::optimization::BFGSMinimizer::step() [with FunctorType = stan::optimization::ModelAdaptor; QNUpdateType = stan::optimization::BFGSUpdate_HInv<>; Scalar = double; int DimAtCompile = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/bfgs.hpp:115:20: required from 'int stan::services::optimize::bfgs(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, double, double, double, double, double, double, int, bool, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:517:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Transpose >, 1>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Transpose >, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Transpose >, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Transpose >, 1, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Transpose >, 1, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Transpose >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:427:86: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs_update.hpp:37:21: required from 'Scalar stan::optimization::BFGSUpdate_HInv::update(const VectorT&, const VectorT&, bool) [with Scalar = double; int DimAtCompile = -1; VectorT = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs.hpp:246:33: required from 'int stan::optimization::BFGSMinimizer::step() [with FunctorType = stan::optimization::ModelAdaptor; QNUpdateType = stan::optimization::BFGSUpdate_HInv<>; Scalar = double; int DimAtCompile = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/bfgs.hpp:115:20: required from 'int stan::services::optimize::bfgs(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, double, double, double, double, double, double, int, bool, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:517:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Product, Eigen::Transpose >, 1> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Product, Eigen::Transpose >, 1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Product, Eigen::Transpose >, 1> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Product, Eigen::Transpose >, 1>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Product, Eigen::Transpose >, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:427:63: required from 'static void Eigen::internal::generic_product_impl::eval_dynamic(Dst&, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, Plain1>, Xpr2>&, const Rhs&, const Func&) [with Dst = Eigen::Matrix; Scalar1 = double; Scalar2 = double; Plain1 = const Eigen::Matrix; Xpr2 = const Eigen::Matrix; Func = Eigen::internal::assign_op; Lhs = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Rhs = Eigen::Transpose >]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:433:32: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs_update.hpp:37:21: required from 'Scalar stan::optimization::BFGSUpdate_HInv::update(const VectorT&, const VectorT&, bool) [with Scalar = double; int DimAtCompile = -1; VectorT = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs.hpp:246:33: required from 'int stan::optimization::BFGSMinimizer::step() [with FunctorType = stan::optimization::ModelAdaptor; QNUpdateType = stan::optimization::BFGSUpdate_HInv<>; Scalar = double; int DimAtCompile = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/bfgs.hpp:115:20: required from 'int stan::services::optimize::bfgs(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, double, double, double, double, double, double, int, bool, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:517:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >; Eigen::Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Array, const Eigen::Array > >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/sum.hpp:47:15: required from 'stan::value_type_t stan::math::sum(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >; stan::require_eigen_vt* = 0; stan::value_type_t = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:90:38: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = true; T_y = Eigen::Matrix, -1, 1>; T_loc = Eigen::Matrix; T_scale = double; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = var_value]' stanExports_scmet.h:805:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Array; Eigen::Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Array; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Array; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/sum.hpp:47:15: required from 'stan::value_type_t stan::math::sum(const T&) [with T = Eigen::Array; stan::require_eigen_vt* = 0; stan::value_type_t = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:90:38: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = true; T_y = Eigen::Matrix, -1, 1>; T_loc = Eigen::Matrix, -1, 1>; T_scale = var_value; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = var_value]' stanExports_scmet.h:811:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, -1, -1, false>, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, -1, -1, false>, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, -1, -1, false>, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointMatrixVector.h:165:45: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:367:35: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, false>, const Eigen::Block, -1, 1, true>, -1, 1, false> >; Eigen::Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, false>, const Eigen::Block, -1, 1, true>, -1, 1, false> > >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, false>, const Eigen::Block, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, false>, const Eigen::Block, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:51: required from 'static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, -1, 1, false>; U = Eigen::Block, -1, 1, true>, -1, 1, false>; bool NeedToTranspose = false; ResScalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from 'typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType Eigen::MatrixBase::dot(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Block, -1, 1, true>, -1, 1, false>; Derived = Eigen::Block, -1, 1, false>; typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType = double; typename Eigen::internal::traits::Scalar = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:370:86: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::CwiseNullaryOp, const Eigen::Array > >; Eigen::Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::CwiseNullaryOp, const Eigen::Array > >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::CwiseNullaryOp, const Eigen::Array > >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/sum.hpp:47:15: required from 'stan::value_type_t stan::math::sum(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::CwiseNullaryOp, const Eigen::Array > >; stan::require_eigen_vt* = 0; stan::value_type_t = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/functor/broadcast_array.hpp:32:16: required from 'void stan::math::internal::broadcast_array::operator=(const Y&) [with Y = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::CwiseNullaryOp, const Eigen::Array > >; T = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:107:37: required from 'stan::return_type_t stan::math::normal_lpdf(const T_y&, const T_loc&, const T_scale&) [with bool propto = true; T_y = Eigen::Matrix, -1, 1>; T_loc = Eigen::Matrix, -1, 1>; T_scale = var_value; stan::require_all_not_nonscalar_prim_or_rev_kernel_expression_t* = 0; stan::return_type_t = var_value]' stanExports_scmet.h:811:45: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >; Eigen::Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true> > >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:28: required from 'static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, -1, 1, true>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1307:23: required from 'const Eigen::internal::evaluator >::Scalar Eigen::internal::evaluator >::coeff(Eigen::Index, Eigen::Index) const [with ArgType = const Eigen::Matrix; MemberOp = Eigen::internal::member_lpnorm<1, double>; int Direction = 0; Scalar = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:381:29: required from 'Eigen::internal::redux_evaluator<_XprType>::CoeffReturnType Eigen::internal::redux_evaluator<_XprType>::coeffByOuterInner(Eigen::Index, Eigen::Index) const [with _XprType = Eigen::PartialReduxExpr, Eigen::internal::member_lpnorm<1, double>, 0>; CoeffReturnType = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:194:32: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_max_op; Derived = Eigen::internal::redux_evaluator, Eigen::internal::member_lpnorm<1, double>, 0> >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_max_op; Derived = Eigen::PartialReduxExpr, Eigen::internal::member_lpnorm<1, double>, 0>; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:438:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff() const [with Derived = Eigen::PartialReduxExpr, Eigen::internal::member_lpnorm<1, double>, 0>; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/matrix_exp_action_handler.hpp:35:44: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >; Eigen::Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> > >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:76:71: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:361:59: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 2, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 2, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 2, Eigen::Stride<0, 0> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:367:35: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, false>, -1, 1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, -1, 1, false>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:69: required from 'struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false>, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from 'struct Eigen::internal::binary_evaluator, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false>, -1, 1, false> >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:373:18: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/Core:371: F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/Memory.h: In instantiation of 'Index Eigen::internal::first_default_aligned(const Scalar*, Index) [with Scalar = double; Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/BlasUtil.h:263:43: required from 'Index Eigen::internal::blas_data_mapper::firstAligned(Index) const [with Scalar = const double; Index = long long int; int StorageOrder = 0; int AlignmentType = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:400:40: required from 'static void Eigen::internal::general_matrix_vector_product::run(Index, Index, const LhsMapper&, const RhsMapper&, ResScalar*, Index, ResScalar) [with Index = long long int; LhsScalar = double; LhsMapper = Eigen::internal::const_blas_data_mapper; bool ConjugateLhs = false; RhsScalar = double; RhsMapper = Eigen::internal::const_blas_data_mapper; bool ConjugateRhs = false; int Version = 0; ResScalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:339:132: required from 'static void Eigen::internal::gemv_dense_selector<2, 1, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; typename Dest::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; int Options = 0; Scalar = double; SrcXprType = Eigen::Product >, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product >, Eigen::Matrix, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product >, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product >, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product >, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/newton.hpp:22:58: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/Memory.h:470:60: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 470 | return first_aligned::alignment>(array, size); | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of 'struct Eigen::internal::general_matrix_vector_product, 0, false, double, Eigen::internal::const_blas_data_mapper, false, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:244:134: required from 'static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Dest = Eigen::Block, -1, 1, false>; typename Dest::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from 'static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Derived = Eigen::internal::generic_product_impl, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:357:18: required from 'static void Eigen::internal::generic_product_impl_base::subTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Derived = Eigen::internal::generic_product_impl, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from 'static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:355:25: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:75:71: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 75 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:76:71: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 76 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:77:71: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 77 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:287:40: required from 'static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Dest = Eigen::Block, -1, 1, false>; typename Dest::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:355:25: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 1>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 1, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 1, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/EigenBase.h:104:9: required from 'void Eigen::EigenBase::applyThisOnTheRight(Dest&) const [with Dest = Eigen::Matrix; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:500:38: required from 'Derived& Eigen::MatrixBase::operator*=(const Eigen::EigenBase&) [with OtherDerived = Eigen::Matrix; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/matrix_exp_action_handler.hpp:118:14: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from 'class Eigen::internal::BlockImpl_dense, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false, false>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:457:74: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:840:89: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Functor = Eigen::internal::add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::TriangularShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/EigenBase.h:144:18: required from 'Derived& Eigen::DenseBase::operator+=(const Eigen::EigenBase&) [with OtherDerived = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:31:19: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, true>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, true>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, -1, true>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:840:89: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Functor = Eigen::internal::add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::TriangularShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/EigenBase.h:144:18: required from 'Derived& Eigen::DenseBase::operator+=(const Eigen::EigenBase&) [with OtherDerived = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:31:19: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from 'class Eigen::internal::BlockImpl_dense, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false, false>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:462:74: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:840:89: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Functor = Eigen::internal::add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::TriangularShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/EigenBase.h:144:18: required from 'Derived& Eigen::DenseBase::operator+=(const Eigen::EigenBase&) [with OtherDerived = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:31:19: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:462:59: required from 'static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Matrix; int Mode = 1; bool LhsIsTriangular = false; Lhs = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; Rhs = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Dest::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:751:113: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:840:89: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Functor = Eigen::internal::add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::TriangularShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/EigenBase.h:144:18: required from 'Derived& Eigen::DenseBase::operator+=(const Eigen::EigenBase&) [with OtherDerived = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:31:19: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false>, -1, 1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = Eigen::internal::assign_op; Weak = void]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>; Src = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>; Src = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Func = assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>; Src = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:361:59: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/Core:503: F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointMatrixVector.h: In instantiation of 'static void Eigen::internal::selfadjoint_matrix_vector_product::run(Index, const Scalar*, Index, const Scalar*, Scalar*, Scalar) [with Scalar = double; Index = long long int; int StorageOrder = 0; int UpLo = 1; bool ConjugateLhs = false; bool ConjugateRhs = false; int Version = 0]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointMatrixVector.h:227:7: required from 'static void Eigen::internal::selfadjoint_product_impl::run(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; int LhsMode = 17; Rhs = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:772:109: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block, -1, 1, false>; Lhs = Eigen::SelfAdjointView, -1, -1, false>, 1>; Rhs = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >; int ProductTag = 7; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from 'static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Block, -1, 1, false>; Lhs = Eigen::SelfAdjointView, -1, -1, false>, 1>; Rhs = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >; Derived = Eigen::internal::generic_product_impl, -1, -1, false>, 1>, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, Eigen::SelfAdjointShape, Eigen::DenseShape, 7>; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from 'static void Eigen::internal::generic_product_impl_base::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Block, -1, 1, false>; Lhs = Eigen::SelfAdjointView, -1, -1, false>, 1>; Rhs = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >; Derived = Eigen::internal::generic_product_impl, -1, -1, false>, 1>, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, Eigen::SelfAdjointShape, Eigen::DenseShape, 7>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Block, -1, 1, false>; Lhs = Eigen::SelfAdjointView, -1, -1, false>, 1>; Rhs = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, -1, -1, false>, 1>, Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:367:35: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix; CoeffVectorType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:445:31: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointMatrixVector.h:60:121: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 60 | conj_helper::IsComplex && EIGEN_LOGICAL_XOR(ConjugateLhs, IsRowMajor), ConjugateRhs> pcj0; | ^~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointMatrixVector.h:60:121: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointMatrixVector.h:61:121: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 61 | conj_helper::IsComplex && EIGEN_LOGICAL_XOR(ConjugateLhs, !IsRowMajor), ConjugateRhs> pcj1; | ^~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointMatrixVector.h:61:121: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, 1, false, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of 'static void Eigen::internal::general_matrix_vector_product::run(Index, Index, const LhsMapper&, const RhsMapper&, ResScalar*, Index, RhsScalar) [with Index = long long int; LhsScalar = double; LhsMapper = Eigen::internal::const_blas_data_mapper; bool ConjugateLhs = false; RhsScalar = double; RhsMapper = Eigen::internal::const_blas_data_mapper; bool ConjugateRhs = false; int Version = 0; ResScalar = double]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:244:134: required from 'static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Dest = Eigen::Block, -1, 1, false>; typename Dest::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from 'static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Derived = Eigen::internal::generic_product_impl, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:357:18: required from 'static void Eigen::internal::generic_product_impl_base::subTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Derived = Eigen::internal::generic_product_impl, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from 'static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:355:25: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: required from 'Eigen::LDLT& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:112:14: required from 'Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:668:10: required from 'const Eigen::LDLT::PlainObject> Eigen::MatrixBase::ldlt() const [with Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/err/check_pos_definite.hpp:45:67: required from 'void stan::math::check_pos_definite(const char*, const char*, const EigMat&) [with EigMat = Eigen::Matrix; stan::require_eigen_matrix_dynamic_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/validate_dense_inv_metric.hpp:21:35: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:112:62: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 112 | conj_helper pcj; | ^~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:112:62: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:45: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, false>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, -1, false>, -1, 1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, -1, false>, 1, -1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, -1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, -1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, -1, false>, -1, -1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, -1, -1, false>, 1, -1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, -1, -1, false>, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:58: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:45: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from 'class Eigen::Diagonal, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:303:32: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:840:89: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Functor = Eigen::internal::add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::TriangularShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/EigenBase.h:144:18: required from 'Derived& Eigen::DenseBase::operator+=(const Eigen::EigenBase&) [with OtherDerived = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:31:19: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:163:27: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, true>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, true>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, -1, false>, -1, 1, true>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:165:25: required from 'void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:256:43: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, -1, 1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:166:55: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, -1, 1, false> >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, -1, 1, false> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, -1, 1, false> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, -1, 1, false> >, 0, 5>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, -1, 1, false> >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, -1, 1, false> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:166:34: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false> >, Eigen::Block, -1, -1, false>, -1, -1, false>, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> >, Eigen::Block, -1, -1, false>, -1, -1, false>, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, false> >, Eigen::Block, -1, -1, false>, -1, -1, false>, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, -1, 1, false> >, Eigen::Block, -1, -1, false>, -1, -1, false>, 0, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, -1, 1, false> >, Eigen::Block, -1, -1, false>, -1, -1, false>, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, -1, 1, false> >, Eigen::Block, -1, -1, false>, -1, -1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:126:41: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:128:25: required from 'void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:259:42: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:129:29: required from 'void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:259:42: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0, 5>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:129:41: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, 1, -1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:37: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:69:58: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, -1, 1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, -1, 1, false>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> > >, -1, 1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 0, Eigen::Stride<0, 0> > >, -1, 1, false, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:69:58: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> > >, -1, 1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> > >, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> > >, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> > >, -1, 1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> > >, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from 'const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>; CoeffReturnType = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:69:58: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 1>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 1, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 1, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvectors_sym.hpp:75:77: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, 1, -1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 1, -1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:321:36: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, -1, -1, false>, 1, -1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, -1, -1, false>, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, -1, -1, false>, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, -1, false>, 1, -1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Block, -1, -1, false>, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, -1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:321:36: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, true>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, -1, true>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 1, -1, true, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:29:18: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, true> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, true> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, 1, -1, true>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, 1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:37: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:29:18: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, 1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, -1, 1, true>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, -1, 1, true>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense >, -1, 1, true, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:29:18: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, true> >, const Eigen::Block >, -1, 1, true> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose, 1, -1, true> >, const Eigen::Block >, -1, 1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, true> >, const Eigen::Block >, -1, 1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, true> >, const Eigen::Block >, -1, 1, true>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, true> >, const Eigen::Block >, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from 'const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Matrix; Rhs = Eigen::Transpose >; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Transpose >; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Matrix; CoeffReturnType = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:29:18: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of 'void Eigen::internal::gemm_pack_rhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long long int; DataMapper = Eigen::internal::const_blas_data_mapper; int nr = 4; bool Conjugate = false; bool PanelMode = true]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:346:25: required from 'static void Eigen::internal::product_triangular_matrix_matrix::run(Index, Index, Index, const Scalar*, Index, const Scalar*, Index, Scalar*, Index, Index, const Scalar&, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long long int; int Mode = 1; int LhsStorageOrder = 1; bool ConjugateLhs = false; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; int Version = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:443:12: required from 'static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Matrix; int Mode = 1; bool LhsIsTriangular = false; Lhs = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; Rhs = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Dest::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:751:113: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; Rhs = Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>; int ProductTag = 8; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from 'static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Matrix; Lhs = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; Rhs = Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>; Derived = Eigen::internal::generic_product_impl, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, Eigen::DenseShape, Eigen::TriangularShape, 8>; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from 'static void Eigen::internal::generic_product_impl_base::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; Rhs = Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>; Derived = Eigen::internal::generic_product_impl, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, Eigen::DenseShape, Eigen::TriangularShape, 8>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:840:89: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Functor = Eigen::internal::add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::TriangularShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/EigenBase.h:144:18: required from 'Derived& Eigen::DenseBase::operator+=(const Eigen::EigenBase&) [with OtherDerived = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:31:19: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1981:62: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 1981 | PacketBlock kernel; | ^~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:457:59: required from 'static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Matrix; int Mode = 1; bool LhsIsTriangular = true; Lhs = Eigen::Map, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; typename Dest::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:738:14: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:111:20: required from 'stan::math::arena_matrix& stan::math::arena_matrix::operator=(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:65:11: required from 'stan::math::arena_matrix::arena_matrix(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_eigen_t* = 0; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/vari.hpp:686:42: required from 'stan::math::vari_value::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type>::vari_value(const S&, bool) [with S = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type = void; typename stan::plain_type::type = Eigen::Matrix; typename std::decay<_Tp>::type = std::decay >::type]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/var.hpp:367:26: required from 'stan::math::var_value::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type>::var_value(S&&) [with S = const Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type = void]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:27:21: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > > >, -1, -1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > > >, -1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > > >, -1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from 'class Eigen::internal::BlockImpl_dense, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > > >, -1, -1, true, false>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > > >, -1, -1, true, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > > >, -1, -1, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:457:74: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:111:20: required from 'stan::math::arena_matrix& stan::math::arena_matrix::operator=(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:65:11: required from 'stan::math::arena_matrix::arena_matrix(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_eigen_t* = 0; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/vari.hpp:686:42: required from 'stan::math::vari_value::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type>::vari_value(const S&, bool) [with S = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type = void; typename stan::plain_type::type = Eigen::Matrix; typename std::decay<_Tp>::type = std::decay >::type]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/var.hpp:367:26: required from 'stan::math::var_value::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type>::var_value(S&&) [with S = const Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type = void]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:27:21: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, true>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, -1, true>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 0, Eigen::Stride<0, 0> >, -1, -1, true, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:111:20: required from 'stan::math::arena_matrix& stan::math::arena_matrix::operator=(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:65:11: required from 'stan::math::arena_matrix::arena_matrix(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_eigen_t* = 0; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/vari.hpp:686:42: required from 'stan::math::vari_value::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type>::vari_value(const S&, bool) [with S = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type = void; typename stan::plain_type::type = Eigen::Matrix; typename std::decay<_Tp>::type = std::decay >::type]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/var.hpp:367:26: required from 'stan::math::var_value::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type>::var_value(S&&) [with S = const Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type = void]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:27:21: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, true> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, true>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:462:59: required from 'static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Matrix; int Mode = 1; bool LhsIsTriangular = true; Lhs = Eigen::Map, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; typename Dest::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:738:14: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:111:20: required from 'stan::math::arena_matrix& stan::math::arena_matrix::operator=(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:65:11: required from 'stan::math::arena_matrix::arena_matrix(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_eigen_t* = 0; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/vari.hpp:686:42: required from 'stan::math::vari_value::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type>::vari_value(const S&, bool) [with S = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type = void; typename stan::plain_type::type = Eigen::Matrix; typename std::decay<_Tp>::type = std::decay >::type]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/var.hpp:367:26: required from 'stan::math::var_value::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type>::var_value(S&&) [with S = const Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type = void]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:27:21: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from 'Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Diagonal, 0>; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from 'Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Diagonal, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:303:42: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:840:89: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Functor = Eigen::internal::add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::TriangularShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/EigenBase.h:144:18: required from 'Derived& Eigen::DenseBase::operator+=(const Eigen::EigenBase&) [with OtherDerived = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:31:19: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> > >, -1, 1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> > >, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:69: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> > >, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> > >, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> > >, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> > >, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:69:58: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 0>, Eigen::Transpose >, 1>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 0>, Eigen::Transpose >, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 0>, Eigen::Transpose >, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 0>, Eigen::Transpose >, 1, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 0>, Eigen::Transpose >, 1, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 0>, Eigen::Transpose >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs_update.hpp:40:11: required from 'Scalar stan::optimization::BFGSUpdate_HInv::update(const VectorT&, const VectorT&, bool) [with Scalar = double; int DimAtCompile = -1; VectorT = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs.hpp:246:33: required from 'int stan::optimization::BFGSMinimizer::step() [with FunctorType = stan::optimization::ModelAdaptor; QNUpdateType = stan::optimization::BFGSUpdate_HInv<>; Scalar = double; int DimAtCompile = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/bfgs.hpp:115:20: required from 'int stan::services::optimize::bfgs(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, double, double, double, double, double, double, int, bool, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:517:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from 'struct Eigen::internal::unary_evaluator, const Eigen::Block, -1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block, -1, -1, false>, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Block, -1, -1, false>, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, -1, false>, 1, -1, false> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, -1, false>, -1, -1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:369:102: required from 'struct Eigen::internal::plain_object_eval, -1, -1, false>, -1, -1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from 'struct Eigen::internal::generic_product_impl, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, Eigen::DenseShape, Eigen::DenseShape, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from 'static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>, -1, -1, false>; Rhs = Eigen::Transpose, -1, -1, false>, 1, -1, false> >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, -1, false>, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0>; Func = sub_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:58:31: required from 'ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0>; ExpressionType = Eigen::Block, -1, -1, false>, -1, 1, false>; StorageBase = Eigen::MatrixBase]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:38: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept_check.hpp:167:5: required from 'struct boost::CopyConstructible<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:125:16: required from 'struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:147:16: required from 'struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied > > >::value' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ In file included from F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept_check.hpp:31: F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function 'boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator > >]' 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept_check.hpp:208:5: required from 'struct boost::Convertible' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied >::value' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:72:8: required from 'struct boost::concepts::requirement_)>' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/iterator/iterator_concepts.hpp:114:7: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function 'boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]' 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement::failed() [with Model = boost::Convertible]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/iterator/iterator_concepts.hpp:114:7: required from 'struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:147:16: required from 'struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied > > >::value' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied > > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]' 37 | ~model() | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:136:13: required from 'struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:147:16: required from 'struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied > > >::value' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied > > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function 'boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >]' 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept_check.hpp:233:5: required from 'struct boost::EqualityComparable<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:147:16: required from 'struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied > > >::value' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied > > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function 'boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator > >]' 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept_check.hpp:208:5: required from 'struct boost::Convertible' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied >::value' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:72:8: required from 'struct boost::concepts::requirement_)>' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:152:13: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function 'boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]' 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement::failed() [with Model = boost::Convertible]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:152:13: required from 'struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied > > >::value' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied > > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:72:8: required from 'struct boost::concepts::requirement_ > >)>' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:278:9: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]' 37 | ~model() | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:158:13: required from 'struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied > > >::value' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied > > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:72:8: required from 'struct boost::concepts::requirement_ > >)>' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:278:9: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function 'boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]' 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement::failed() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:278:9: required from 'struct boost::SinglePassRangeConcept > > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept > > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied > > > >::value' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:72:8: required from 'struct boost::concepts::requirement_ > > >)>' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]' 37 | ~model() | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > > >]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:284:9: required from 'struct boost::SinglePassRangeConcept > > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept > > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied > > > >::value' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:72:8: required from 'struct boost::concepts::requirement_ > > >)>' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function 'boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept > > >]' 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement::failed() [with Model = boost::SinglePassRangeConcept > > >]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/algorithm/equal.hpp:174:13: required from 'bool boost::range::equal(const SinglePassRange1&, const SinglePassRange2&) [with SinglePassRange1 = boost::iterator_range<__gnu_cxx::__normal_iterator > >; SinglePassRange2 = boost::iterator_range<__gnu_cxx::__normal_iterator > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/iterator_range_core.hpp:644:32: required from 'bool boost::operator==(const iterator_range&, const iterator_range&) [with Iterator1T = __gnu_cxx::__normal_iterator >; Iterator2T = __gnu_cxx::__normal_iterator >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/find_iterator.hpp:359:32: required from 'bool boost::algorithm::split_iterator::equal(const boost::algorithm::split_iterator&) const [with IteratorT = __gnu_cxx::__normal_iterator >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/iterator/iterator_facade.hpp:649:26: required from 'static bool boost::iterators::iterator_core_access::equal(const Facade1&, const Facade2&, mpl_::true_) [with Facade1 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >; Facade2 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >; mpl_::true_ = mpl_::bool_]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/iterator/iterator_facade.hpp:981:3: required from 'typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator==(const iterator_facade&, const iterator_facade&) [with Derived1 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >; V1 = const boost::iterator_range<__gnu_cxx::__normal_iterator > >; TC1 = forward_traversal_tag; Reference1 = const boost::iterator_range<__gnu_cxx::__normal_iterator > >&; Difference1 = long long int; Derived2 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >; V2 = const boost::iterator_range<__gnu_cxx::__normal_iterator > >; TC2 = forward_traversal_tag; Reference2 = const boost::iterator_range<__gnu_cxx::__normal_iterator > >&; Difference2 = long long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/iterator/iterator_adaptor.hpp:305:29: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::SinglePassRangeConcept::~SinglePassRangeConcept() [with T = const boost::iterator_range<__gnu_cxx::__normal_iterator > >]' 37 | ~model() | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:457:59: required from 'static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Matrix; int Mode = 2; bool LhsIsTriangular = false; Lhs = Eigen::Matrix; Rhs = const Eigen::Transpose >; typename Dest::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:751:113: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/to_ref.hpp:18:27: required from 'stan::ref_type_t stan::math::to_ref(T&&) [with T = const Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >&; stan::ref_type_t = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:27:29: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, -1, -1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, -1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, -1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from 'class Eigen::internal::BlockImpl_dense, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, -1, -1, true, false>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, -1, -1, true, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, -1, -1, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:457:74: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/to_ref.hpp:18:27: required from 'stan::ref_type_t stan::math::to_ref(T&&) [with T = const Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >&; stan::ref_type_t = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:27:29: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, true>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, -1, true>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, -1, true, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/to_ref.hpp:18:27: required from 'stan::ref_type_t stan::math::to_ref(T&&) [with T = const Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >&; stan::ref_type_t = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:27:29: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, true> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, true>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:462:59: required from 'static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Matrix; int Mode = 2; bool LhsIsTriangular = false; Lhs = Eigen::Matrix; Rhs = const Eigen::Transpose >; typename Dest::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:751:113: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/to_ref.hpp:18:27: required from 'stan::ref_type_t stan::math::to_ref(T&&) [with T = const Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >&; stan::ref_type_t = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:27:29: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, -1, true> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:270:41: required from 'struct Eigen::internal::unary_evaluator, 1, -1, true> >, Eigen::internal::IndexBased, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, 1, -1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 1, -1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 1, -1, true> >, const Eigen::Block >, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:29:18: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, -1, 1, true> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator >, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:69: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 1, -1, true> >, const Eigen::Block >, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::Transpose, 1, -1, true> >, const Eigen::Block >, -1, 1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Transpose, 1, -1, true> >, const Eigen::Block >, -1, 1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, true> >, const Eigen::Block >, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:29:18: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:150:68: required from 'static void Eigen::internal::product_triangular_matrix_matrix::run(Index, Index, Index, const Scalar*, Index, const Scalar*, Index, Scalar*, Index, Index, const Scalar&, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long long int; int Mode = 1; int LhsStorageOrder = 0; bool ConjugateLhs = false; int RhsStorageOrder = 1; bool ConjugateRhs = false; int ResInnerStride = 1; int Version = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:443:12: required from 'static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Matrix; int Mode = 1; bool LhsIsTriangular = true; Lhs = Eigen::Map, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; typename Dest::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:738:14: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:111:20: required from 'stan::math::arena_matrix& stan::math::arena_matrix::operator=(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:65:11: required from 'stan::math::arena_matrix::arena_matrix(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_eigen_t* = 0; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/vari.hpp:686:42: required from 'stan::math::vari_value::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type>::vari_value(const S&, bool) [with S = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type = void; typename stan::plain_type::type = Eigen::Matrix; typename std::decay<_Tp>::type = std::decay >::type]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/var.hpp:367:26: required from 'stan::math::var_value::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type>::var_value(S&&) [with S = const Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type = void]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:27:21: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:111:20: required from 'stan::math::arena_matrix& stan::math::arena_matrix::operator=(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:65:11: required from 'stan::math::arena_matrix::arena_matrix(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_eigen_t* = 0; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/vari.hpp:686:42: required from 'stan::math::vari_value::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type>::vari_value(const S&, bool) [with S = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type = void; typename stan::plain_type::type = Eigen::Matrix; typename std::decay<_Tp>::type = std::decay >::type]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/var.hpp:367:26: required from 'stan::math::var_value::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type>::var_value(S&&) [with S = const Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type = void]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:27:21: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from 'class Eigen::Diagonal, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:153:32: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:111:20: required from 'stan::math::arena_matrix& stan::math::arena_matrix::operator=(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:65:11: required from 'stan::math::arena_matrix::arena_matrix(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_eigen_t* = 0; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/vari.hpp:686:42: required from 'stan::math::vari_value::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type>::vari_value(const S&, bool) [with S = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type = void; typename stan::plain_type::type = Eigen::Matrix; typename std::decay<_Tp>::type = std::decay >::type]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/var.hpp:367:26: required from 'stan::math::var_value::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type>::var_value(S&&) [with S = const Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type = void]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:27:21: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:174:81: required from 'class Eigen::DenseBase, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from 'class Eigen::Diagonal, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:153:32: required from 'static void Eigen::internal::product_triangular_matrix_matrix::run(Index, Index, Index, const Scalar*, Index, const Scalar*, Index, Scalar*, Index, Index, const Scalar&, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long long int; int Mode = 1; int LhsStorageOrder = 0; bool ConjugateLhs = false; int RhsStorageOrder = 1; bool ConjugateRhs = false; int ResInnerStride = 1; int Version = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:443:12: required from 'static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Matrix; int Mode = 1; bool LhsIsTriangular = true; Lhs = Eigen::Map, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; typename Dest::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:738:14: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:111:20: required from 'stan::math::arena_matrix& stan::math::arena_matrix::operator=(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:65:11: required from 'stan::math::arena_matrix::arena_matrix(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_eigen_t* = 0; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/vari.hpp:686:42: required from 'stan::math::vari_value::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type>::vari_value(const S&, bool) [with S = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type = void; typename stan::plain_type::type = Eigen::Matrix; typename std::decay<_Tp>::type = std::decay >::type]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/var.hpp:367:26: required from 'stan::math::var_value::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type>::var_value(S&&) [with S = const Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type = void]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:27:21: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:369:102: required from 'struct Eigen::internal::plain_object_eval, -1, 1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:370:45: required from 'struct Eigen::internal::generic_product_impl, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Lhs = Eigen::Block, -1, -1, false>, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:42:31: required from 'ExpressionType& Eigen::NoAlias::operator=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Map, 0, Eigen::Stride<0, 0> >; StorageBase = Eigen::MatrixBase]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:163:19: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from 'Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from 'Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:436:18: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs_update.hpp:40:11: required from 'Scalar stan::optimization::BFGSUpdate_HInv::update(const VectorT&, const VectorT&, bool) [with Scalar = double; int DimAtCompile = -1; VectorT = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs.hpp:246:33: required from 'int stan::optimization::BFGSMinimizer::step() [with FunctorType = stan::optimization::ModelAdaptor; QNUpdateType = stan::optimization::BFGSUpdate_HInv<>; Scalar = double; int DimAtCompile = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/bfgs.hpp:115:20: required from 'int stan::services::optimize::bfgs(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, double, double, double, double, double, double, int, bool, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:517:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 16, Eigen::Stride<0, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 16, Eigen::Stride<0, 0> >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 16, Eigen::Stride<0, 0> >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 16, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 16, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 16, Eigen::Stride<0, 0> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp: In instantiation of 'boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator > >]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: required from 'static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept_check.hpp:167:5: required from 'struct boost::CopyConstructible<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:125:16: required from 'struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:147:16: required from 'struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:20:48: warning: 'this' pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::CopyConstructible::~CopyConstructible() [with TT = __gnu_cxx::__normal_iterator >]' 37 | ~model() | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept_check.hpp:167:5: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 167 | BOOST_CONCEPT_USAGE(CopyConstructible) { | ^~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp: In instantiation of 'boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: required from 'static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept_check.hpp:208:5: required from 'struct boost::Convertible' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied >::value' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 22 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:20:48: warning: 'this' pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]' 37 | ~model() | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp: In instantiation of 'boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: required from 'static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:136:13: required from 'struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:147:16: required from 'struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied > > >::value' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:20:48: warning: 'this' pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::range_detail::IncrementableIteratorConcept::~IncrementableIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]' 37 | ~model() | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:136:13: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 136 | BOOST_CONCEPT_USAGE(IncrementableIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp: In instantiation of 'boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator > >]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: required from 'static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept_check.hpp:233:5: required from 'struct boost::EqualityComparable<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:147:16: required from 'struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied > > >::value' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:20:48: warning: 'this' pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::EqualityComparable::~EqualityComparable() [with TT = __gnu_cxx::__normal_iterator >]' 37 | ~model() | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept_check.hpp:233:5: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 233 | BOOST_CONCEPT_USAGE(EqualityComparable) { | ^~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp: In instantiation of 'boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: required from 'static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept_check.hpp:208:5: required from 'struct boost::Convertible' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied >::value' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:20:48: warning: 'this' pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]' 37 | ~model() | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp: In instantiation of 'boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: required from 'static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:158:13: required from 'struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied > > >::value' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied > > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:20:48: warning: 'this' pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]' 37 | ~model() | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp: In instantiation of 'boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept > > >]': F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:50:47: required from 'static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:284:9: required from 'struct boost::SinglePassRangeConcept > > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept > > >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied > > > >::value' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]' F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = detail::is_any_ofF]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:39:28: required from 'void stan::services::get_model_parameters(const Model&, std::vector >&, std::vector >&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/standalone_gqs.hpp:103:23: required from 'int stan::services::standalone_generate(const Model&, const Eigen::MatrixXd&, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet; Eigen::MatrixXd = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1253:46: required from 'SEXPREC* rstan::stan_fit::standalone_gqs(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:30:89: required from here F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:20:48: warning: 'this' pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::SinglePassRangeConcept::~SinglePassRangeConcept() [with T = const boost::iterator_range<__gnu_cxx::__normal_iterator > >]' 37 | ~model() | ^ F:/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/to_ref.hpp:18:27: required from 'stan::ref_type_t stan::math::to_ref(T&&) [with T = const Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >&; stan::ref_type_t = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:27:29: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from 'class Eigen::Diagonal, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:303:32: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/to_ref.hpp:18:27: required from 'stan::ref_type_t stan::math::to_ref(T&&) [with T = const Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >&; stan::ref_type_t = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:27:29: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>; SrcXprType = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false>; Functor = sub_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>; SrcXprType = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false>; Functor = Eigen::internal::sub_assign_op; Weak = void]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, -1, false>; Src = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false>; Func = sub_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, -1, false>; Src = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false>; Func = sub_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18: required from 'Derived& Eigen::MatrixBase::operator-=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false>; Derived = Eigen::Block, -1, -1, false>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:457:31: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:840:89: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Functor = Eigen::internal::add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::TriangularShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/EigenBase.h:144:18: required from 'Derived& Eigen::DenseBase::operator+=(const Eigen::EigenBase&) [with OtherDerived = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:31:19: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:69: required from 'struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> >; Functor = sub_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> >; Functor = Eigen::internal::sub_assign_op; Weak = void]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:840:89: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Functor = Eigen::internal::add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::TriangularShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/EigenBase.h:144:18: required from 'Derived& Eigen::DenseBase::operator+=(const Eigen::EigenBase&) [with OtherDerived = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:31:19: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, -1, true> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> >; Functor = sub_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> >; Functor = Eigen::internal::sub_assign_op; Weak = void]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, -1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> >; Func = sub_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, -1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> >; Func = sub_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18: required from 'Derived& Eigen::MatrixBase::operator-=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, -1, -1, false> >; Derived = Eigen::Block, -1, -1, true>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:462:32: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:840:89: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Functor = Eigen::internal::add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::TriangularShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/EigenBase.h:144:18: required from 'Derived& Eigen::DenseBase::operator+=(const Eigen::EigenBase&) [with OtherDerived = Eigen::TriangularView, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::TriangularView, 0, Eigen::Stride<0, 0> >, 1>, 0>, 1>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:31:19: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, 1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, -1, 1, false>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, -1, 1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense >, -1, 1, false, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs_update.hpp:37:21: required from 'Scalar stan::optimization::BFGSUpdate_HInv::update(const VectorT&, const VectorT&, bool) [with Scalar = double; int DimAtCompile = -1; VectorT = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs.hpp:246:33: required from 'int stan::optimization::BFGSMinimizer::step() [with FunctorType = stan::optimization::ModelAdaptor; QNUpdateType = stan::optimization::BFGSUpdate_HInv<>; Scalar = double; int DimAtCompile = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/bfgs.hpp:115:20: required from 'int stan::services::optimize::bfgs(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, double, double, double, double, double, double, int, bool, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:517:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from 'const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Matrix; Rhs = Eigen::Transpose >; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Transpose >; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Matrix; CoeffReturnType = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:713:64: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs_update.hpp:37:21: required from 'Scalar stan::optimization::BFGSUpdate_HInv::update(const VectorT&, const VectorT&, bool) [with Scalar = double; int DimAtCompile = -1; VectorT = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs.hpp:246:33: required from 'int stan::optimization::BFGSMinimizer::step() [with FunctorType = stan::optimization::ModelAdaptor; QNUpdateType = stan::optimization::BFGSUpdate_HInv<>; Scalar = double; int DimAtCompile = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/bfgs.hpp:115:20: required from 'int stan::services::optimize::bfgs(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, double, double, double, double, double, double, int, bool, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:517:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, -1, false>, -1, 1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, 1, false>; SrcXprType = Eigen::CwiseNullaryOp, Eigen::Matrix >; Functor = div_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, 1, false>; SrcXprType = Eigen::CwiseNullaryOp, Eigen::Matrix >; Functor = Eigen::internal::div_assign_op; Weak = void]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, -1, false>, -1, 1, false>; Src = Eigen::CwiseNullaryOp, Eigen::Matrix >; Func = div_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, -1, false>, -1, 1, false>; Src = Eigen::CwiseNullaryOp, Eigen::Matrix >; Func = div_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:28: required from 'Derived& Eigen::DenseBase::operator/=(const Scalar&) [with Derived = Eigen::Block, -1, -1, false>, -1, 1, false>; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:326:21: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::OuterStride<> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::OuterStride<> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::OuterStride<> >, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::OuterStride<> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:39:18: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, 1, -1, true, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:57: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:72: required from 'static void Eigen::internal::triangular_solve_vector::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long long int; int Mode = 2; bool Conjugate = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from 'class Eigen::internal::BlockImpl_dense, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, -1, 1, true, false>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, -1, 1, true, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, -1, 1, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:358:52: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:68:23: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, -1, 1, true> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, -1, 1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, -1, 1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:358:43: required from 'static void Eigen::internal::gemv_dense_selector<2, 0, false>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::CwiseUnaryOp, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >; Rhs = Eigen::Map, 0, Eigen::Stride<0, 0> >; Dest = Eigen::Matrix; typename Dest::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:68:23: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, true> >, const Eigen::Block >, -1, 1, true> >; Eigen::Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Transpose, 1, -1, true> >, const Eigen::Block >, -1, 1, true> > >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, true> >, const Eigen::Block >, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, true> >, const Eigen::Block >, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:75: required from 'const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Matrix; Rhs = Eigen::Transpose >; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Transpose >; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Matrix; CoeffReturnType = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: required from 'void Eigen::internal::generic_dense_assignment_kernel::assignCoeff(Eigen::Index, Eigen::Index) [with DstEvaluatorTypeT = Eigen::internal::evaluator >; SrcEvaluatorTypeT = Eigen::internal::evaluator, Eigen::Transpose >, 1> >; Functor = Eigen::internal::assign_op; int Version = 0; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:645:16: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:29:18: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from 'Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from 'Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:151:29: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:111:20: required from 'stan::math::arena_matrix& stan::math::arena_matrix::operator=(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:65:11: required from 'stan::math::arena_matrix::arena_matrix(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_eigen_t* = 0; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/vari.hpp:686:42: required from 'stan::math::vari_value::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type>::vari_value(const S&, bool) [with S = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type = void; typename stan::plain_type::type = Eigen::Matrix; typename std::decay<_Tp>::type = std::decay >::type]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/var.hpp:367:26: required from 'stan::math::var_value::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type>::var_value(S&&) [with S = const Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type = void]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:27:21: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from 'Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Diagonal, 0>; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from 'Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Diagonal, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:153:42: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:111:20: required from 'stan::math::arena_matrix& stan::math::arena_matrix::operator=(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:65:11: required from 'stan::math::arena_matrix::arena_matrix(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_eigen_t* = 0; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/vari.hpp:686:42: required from 'stan::math::vari_value::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type>::vari_value(const S&, bool) [with S = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type = void; typename stan::plain_type::type = Eigen::Matrix; typename std::decay<_Tp>::type = std::decay >::type]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/var.hpp:367:26: required from 'stan::math::var_value::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type>::var_value(S&&) [with S = const Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type = void]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:27:21: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, -1, false>, -1, 1, true> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::Block, -1, -1, false>, -1, 1, true>; Functor = add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::Block, -1, -1, false>, -1, 1, true>; Functor = Eigen::internal::add_assign_op; Weak = void]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Block, -1, -1, false>, -1, 1, true>; Func = add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Block, -1, -1, false>, -1, 1, true>; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:177:18: required from 'Derived& Eigen::MatrixBase::operator+=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::Block, -1, -1, false>, -1, 1, true>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:164:9: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, -1, 1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, -1, 1, true>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, -1, 1, true>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, -1, -1, false>, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, -1, -1, false>, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, -1, false>, -1, -1, false>, -1, 1, true>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from 'const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Matrix; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Matrix; CoeffReturnType = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/EigenBase.h:104:9: required from 'void Eigen::EigenBase::applyThisOnTheRight(Dest&) const [with Dest = Eigen::Matrix; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:500:38: required from 'Derived& Eigen::MatrixBase::operator*=(const Eigen::EigenBase&) [with OtherDerived = Eigen::Matrix; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/matrix_exp_action_handler.hpp:118:14: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from 'Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from 'Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:301:29: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/to_ref.hpp:18:27: required from 'stan::ref_type_t stan::math::to_ref(T&&) [with T = const Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >&; stan::ref_type_t = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:27:29: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, -1, 1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator >, -1, 1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:69: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs_update.hpp:37:21: required from 'Scalar stan::optimization::BFGSUpdate_HInv::update(const VectorT&, const VectorT&, bool) [with Scalar = double; int DimAtCompile = -1; VectorT = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/optimization/bfgs.hpp:246:33: required from 'int stan::optimization::BFGSMinimizer::step() [with FunctorType = stan::optimization::ModelAdaptor; QNUpdateType = stan::optimization::BFGSUpdate_HInv<>; Scalar = double; int DimAtCompile = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/optimize/bfgs.hpp:115:20: required from 'int stan::services::optimize::bfgs(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, double, double, double, double, double, double, int, bool, int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:517:41: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:961:41: required from 'struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:270:41: required from 'struct Eigen::internal::unary_evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, Eigen::internal::IndexBased, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:270:41: required from 'struct Eigen::internal::unary_evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, Eigen::internal::IndexBased, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:111:20: required from 'stan::math::arena_matrix& stan::math::arena_matrix::operator=(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:65:11: required from 'stan::math::arena_matrix::arena_matrix(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_eigen_t* = 0; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/vari.hpp:686:42: required from 'stan::math::vari_value::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type>::vari_value(const S&, bool) [with S = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type = void; typename stan::plain_type::type = Eigen::Matrix; typename std::decay<_Tp>::type = std::decay >::type]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/var.hpp:367:26: required from 'stan::math::var_value::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type>::var_value(S&&) [with S = const Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type = void]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:27:21: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > > >, -1, -1, true> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>; SrcXprType = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > > >, -1, -1, true>; Functor = sub_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>; SrcXprType = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > > >, -1, -1, true>; Functor = Eigen::internal::sub_assign_op; Weak = void]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, -1, false>; Src = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > > >, -1, -1, true>; Func = sub_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, -1, false>; Src = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > > >, -1, -1, true>; Func = sub_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18: required from 'Derived& Eigen::MatrixBase::operator-=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > > >, -1, -1, true>; Derived = Eigen::Block, -1, -1, false>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:457:31: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:111:20: required from 'stan::math::arena_matrix& stan::math::arena_matrix::operator=(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:65:11: required from 'stan::math::arena_matrix::arena_matrix(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_eigen_t* = 0; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/vari.hpp:686:42: required from 'stan::math::vari_value::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type>::vari_value(const S&, bool) [with S = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type = void; typename stan::plain_type::type = Eigen::Matrix; typename std::decay<_Tp>::type = std::decay >::type]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/var.hpp:367:26: required from 'stan::math::var_value::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type>::var_value(S&&) [with S = const Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type = void]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:27:21: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, true> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:69: required from 'struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, true> >; Functor = sub_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, true> >; Functor = Eigen::internal::sub_assign_op; Weak = void]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:111:20: required from 'stan::math::arena_matrix& stan::math::arena_matrix::operator=(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/arena_matrix.hpp:65:11: required from 'stan::math::arena_matrix::arena_matrix(const T&) [with T = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_eigen_t* = 0; MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/vari.hpp:686:42: required from 'stan::math::vari_value::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type>::vari_value(const S&, bool) [with S = Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::type, typename stan::plain_type::type>, stan::is_eigen_dense_base >::value, void>::type = void; typename stan::plain_type::type = Eigen::Matrix; typename std::decay<_Tp>::type = std::decay >::type]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/core/var.hpp:367:26: required from 'stan::math::var_value::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type>::var_value(S&&) [with S = const Eigen::Product, 0, Eigen::Stride<0, 0> >, 1>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; stan::require_assignable_t* = 0; T = Eigen::Matrix; typename std::enable_if::value || stan::is_kernel_expression_and_not_scalar::value)>::value, void>::type = void]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply_lower_tri_self_transpose.hpp:27:21: required from 'auto stan::math::multiply_lower_tri_self_transpose(const T&) [with T = var_value >; stan::require_rev_matrix_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/cov_matrix_constrain.hpp:59:43: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, 0, Eigen::Stride<0, 0> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, -1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, -1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, -1, -1, false>, -1, -1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, -1, -1, false>, -1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:197:26: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false> > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false> > >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, false> > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, -1, 1, false> >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, -1, 1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:197:43: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 0, Eigen::Stride<0, 0> >, 1, -1, false, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvectors_sym.hpp:75:77: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, 0, Eigen::Stride<0, 0> >, 1, -1, false>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:37: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvectors_sym.hpp:75:77: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from 'const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Map, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Map, 0, Eigen::Stride<0, 0> >; CoeffReturnType = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvectors_sym.hpp:75:77: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, -1, -1, true> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>; SrcXprType = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, -1, -1, true>; Functor = sub_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>; SrcXprType = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, -1, -1, true>; Functor = Eigen::internal::sub_assign_op; Weak = void]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, -1, false>; Src = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, -1, -1, true>; Func = sub_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, -1, false>; Src = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, -1, -1, true>; Func = sub_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18: required from 'Derived& Eigen::MatrixBase::operator-=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, -1, -1, true>; Derived = Eigen::Block, -1, -1, false>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:457:31: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/to_ref.hpp:18:27: required from 'stan::ref_type_t stan::math::to_ref(T&&) [with T = const Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >&; stan::ref_type_t = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:27:29: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, -1, true> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, -1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:69: required from 'struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, true> >; Functor = sub_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, true> >; Functor = Eigen::internal::sub_assign_op; Weak = void]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/to_ref.hpp:18:27: required from 'stan::ref_type_t stan::math::to_ref(T&&) [with T = const Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >&; stan::ref_type_t = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/tcrossprod.hpp:27:29: required from 'Eigen::Matrix::type, T::RowsAtCompileTime, T::RowsAtCompileTime> stan::math::tcrossprod(const T&) [with T = Eigen::Transpose, Eigen::TriangularView >, 2>, 0> >; stan::require_eigen_vt* = 0; typename stan::value_type::type = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/fun/crossprod.hpp:21:20: required from 'auto stan::math::crossprod(const EigMat&) [with EigMat = Eigen::Product, Eigen::TriangularView >, 2>, 0>; stan::require_eigen_t* = 0]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/prim/prob/wishart_rng.hpp:34:19: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; Eigen::Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:127: required from 'static void Eigen::internal::triangular_solve_vector::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long long int; int Mode = 2; bool Conjugate = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: required from 'static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Transpose >; Rhs = Eigen::Matrix; int Side = 1; int Mode = 2]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/util/run_adaptive_sampler.hpp:52:26: required from 'void stan::services::util::run_adaptive_sampler(Sampler&, Model&, std::vector&, int, int, int, int, bool, RNG&, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&) [with Sampler = stan::mcmc::adapt_dense_e_nuts, boost::random::linear_congruential_engine > >; Model = model_scmet_namespace::model_scmet; RNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:99:29: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e_adapt.hpp:152:32: required from 'int stan::services::sample::hmc_nuts_dense_e_adapt(Model&, const stan::io::var_context&, unsigned int, unsigned int, double, int, int, int, bool, int, double, double, int, double, double, double, double, unsigned int, unsigned int, unsigned int, stan::callbacks::interrupt&, stan::callbacks::logger&, stan::callbacks::writer&, stan::callbacks::writer&, stan::callbacks::writer&) [with Model = model_scmet_namespace::model_scmet]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:638:37: required from 'int rstan::{anonymous}::command(rstan::stan_args&, Model&, Rcpp::List&, const std::vector&, const std::vector >&, RNG_t&) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; Rcpp::List = Rcpp::Vector<19>]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1215:18: required from 'SEXPREC* rstan::stan_fit::call_sampler(SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:15:87: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, 1, -1, false> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, 1, -1, false> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:270:41: required from 'struct Eigen::internal::unary_evaluator, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, Eigen::internal::IndexBased, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, 1, -1, false> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvectors_sym.hpp:75:77: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, -1, 1, true> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:69: required from 'struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, -1, 1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, -1, 1, true> >; Functor = add_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1>, 0, Eigen::Stride<0, 0> > >::val_Op, Eigen::Map, -1, -1>, 0, Eigen::Stride<0, 0> > >, -1, 1, true> >; Functor = Eigen::internal::add_assign_op; Weak = void]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/multiply.hpp:68:23: required from 'auto stan::math::multiply(const T1&, const T2&) [with T1 = Eigen::Matrix; T2 = Eigen::Matrix, -1, 1>; stan::require_all_matrix_t* = 0; stan::require_any_st_var* = 0; stan::require_return_type_t* = 0; stan::require_not_row_and_col_vector_t* = 0]' stanExports_scmet.h:738:46: required from 'stan::scalar_type_t model_scmet_namespace::model_scmet::log_prob_impl(VecR&, VecI&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; VecR = std::vector, std::allocator > >; VecI = std::vector; stan::require_vector_like_t* = 0; stan::require_vector_like_vt* = 0; stan::scalar_type_t = stan::math::var_value; std::ostream = std::basic_ostream]' stanExports_scmet.h:1374:49: required from 'T__ model_scmet_namespace::model_scmet::log_prob(std::vector&, std::vector&, std::ostream*) const [with bool propto__ = true; bool jacobian__ = true; T__ = stan::math::var_value; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:79: required from 'double stan::model::log_prob_grad(const M&, std::vector&, std::vector&, std::vector&, std::ostream*) [with bool propto = true; bool jacobian_adjust_transform = true; M = model_scmet_namespace::model_scmet; std::ostream = std::basic_ostream]' F:/biocbuild/bbs-3.17-bioc/R/library/rstan/include/rstan/stan_fit.hpp:1183:49: required from 'SEXPREC* rstan::stan_fit::grad_log_prob(SEXP, SEXP) [with Model = model_scmet_namespace::model_scmet; RNG_t = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >; SEXP = SEXPREC*]' stanExports_scmet.cc:23:88: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, -1, false>, -1, -1, false>, -1, 1, true> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Functor = sub_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Functor = Eigen::internal::sub_assign_op; Weak = void]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Func = sub_assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Func = sub_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18: required from 'Derived& Eigen::MatrixBase::operator-=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Derived = Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:305:135: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:238:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::HouseholderSequence, Eigen::Matrix, 1>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:11: required from 'static void Eigen::internal::tridiagonalization_inplace_selector::run(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix; MatrixType = Eigen::Matrix; int Size = -1; bool IsComplex = false]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:430:55: required from 'void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, bool) [with MatrixType = Eigen::Matrix; DiagonalType = Eigen::Matrix; SubDiagonalType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:437:39: required from 'Eigen::SelfAdjointEigenSolver& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:168:14: required from 'Eigen::SelfAdjointEigenSolver<_MatrixType>::SelfAdjointEigenSolver(const Eigen::EigenBase&, int) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvalues_sym.hpp:46:54: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 1>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 1> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 1, 8>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 1, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 22 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvectors_sym.hpp:75:77: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 1, -1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 1, -1, true>, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> > >, 1, -1, true>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 0, Eigen::Stride<0, 0> > >, 1, -1, true, true>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 31 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvectors_sym.hpp:75:77: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >, 1, -1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >, 1, -1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, 0, Eigen::Stride<0, 0> > >, 1, -1, true>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:37: [ skipping 29 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvectors_sym.hpp:75:77: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >, const Eigen::Block, -1, 1, true> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >, const Eigen::Block, -1, 1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >, const Eigen::Block, -1, 1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >, const Eigen::Block, -1, 1, true>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >, const Eigen::Block, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from 'const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; Rhs = Eigen::Matrix; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Matrix; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; CoeffReturnType = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 28 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvectors_sym.hpp:75:77: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:270:41: required from 'struct Eigen::internal::unary_evaluator, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >, Eigen::internal::IndexBased, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> > >, 1, -1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> > >, 1, -1, true> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >, const Eigen::Block, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 33 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvectors_sym.hpp:75:77: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >, const Eigen::Block, -1, 1, true> >; Eigen::Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >, const Eigen::Block, -1, 1, true> > >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >, const Eigen::Block, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1, -1, true> >, const Eigen::Block, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:75: required from 'const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; Rhs = Eigen::Matrix; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Matrix; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; CoeffReturnType = double; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: required from 'void Eigen::internal::generic_dense_assignment_kernel::assignCoeff(Eigen::Index, Eigen::Index) [with DstEvaluatorTypeT = Eigen::internal::evaluator >; SrcEvaluatorTypeT = Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 1> >; Functor = Eigen::internal::assign_op; int Version = 0; Eigen::Index = long long int]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:645:16: [ skipping 27 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>; Rhs = Eigen::Transpose, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Func = assign_op]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Matrix, 0> >, 0>, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/stan/math/rev/fun/eigenvectors_sym.hpp:75:77: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Matrix, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/nuts/base_nuts.hpp:175:21: required from 'stan::mcmc::sample stan::mcmc::base_nuts::transition(stan::mcmc::sample&, stan::callbacks::logger&) [with Model = model_scmet_namespace::model_scmet; Hamiltonian = stan::mcmc::diag_e_metric; Integrator = stan::mcmc::expl_leapfrog; BaseRNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/nuts/base_nuts.hpp:78:10: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:44: required from 'static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Matrix; U = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >; bool NeedToTranspose = false; ResScalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from 'typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType Eigen::MatrixBase::dot(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >; Derived = Eigen::Matrix; typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType = double; typename Eigen::internal::traits::Scalar = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/diag_e_metric.hpp:21:25: required from 'double stan::mcmc::diag_e_metric::T(stan::mcmc::diag_e_point&) [with Model = model_scmet_namespace::model_scmet; BaseRNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/diag_e_metric.hpp:20:10: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0> >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0> > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:39: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: required from 'Eigen::internal::product_evaluator, ProductTag, LhsShape, RhsShape>::product_evaluator(const XprType&) [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Options = 0; int ProductTag = 6; LhsShape = Eigen::DenseShape; RhsShape = Eigen::DenseShape; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Matrix; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; XprType = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:35:90: required from 'Eigen::internal::evaluator >::evaluator(const XprType&) [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Options = 0; XprType = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:132:22: required from 'Eigen::internal::dense_product_base::operator const Scalar() const [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Option = 0; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:22:56: required from 'double stan::mcmc::dense_e_metric::T(stan::mcmc::dense_e_point&) [with Model = model_scmet_namespace::model_scmet; BaseRNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:10: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0> >, const Eigen::Matrix >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0> >, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0> >, const Eigen::Matrix > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0> >, const Eigen::Matrix, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0> >, const Eigen::Matrix >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:54: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: required from 'Eigen::internal::product_evaluator, ProductTag, LhsShape, RhsShape>::product_evaluator(const XprType&) [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Options = 0; int ProductTag = 6; LhsShape = Eigen::DenseShape; RhsShape = Eigen::DenseShape; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Matrix; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; XprType = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:35:90: required from 'Eigen::internal::evaluator >::evaluator(const XprType&) [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Options = 0; XprType = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:132:22: required from 'Eigen::internal::dense_product_base::operator const Scalar() const [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Option = 0; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:22:56: required from 'double stan::mcmc::dense_e_metric::T(stan::mcmc::dense_e_point&) [with Model = model_scmet_namespace::model_scmet; BaseRNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:10: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix > >; Eigen::Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix > > >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix > >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix > >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:51: required from 'static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Matrix; U = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >; bool NeedToTranspose = false; ResScalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from 'typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType Eigen::MatrixBase::dot(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >; Derived = Eigen::Matrix; typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType = double; typename Eigen::internal::traits::Scalar = double; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/diag_e_metric.hpp:21:25: required from 'double stan::mcmc::diag_e_metric::T(stan::mcmc::diag_e_point&) [with Model = model_scmet_namespace::model_scmet; BaseRNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/diag_e_metric.hpp:20:10: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0> >, const Eigen::Matrix >; Eigen::Index = long long int]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Transpose, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0> >, const Eigen::Matrix > >; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0> >, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0> >, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:64: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: required from 'Eigen::internal::product_evaluator, ProductTag, LhsShape, RhsShape>::product_evaluator(const XprType&) [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Options = 0; int ProductTag = 6; LhsShape = Eigen::DenseShape; RhsShape = Eigen::DenseShape; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Matrix; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; XprType = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:35:90: required from 'Eigen::internal::evaluator >::evaluator(const XprType&) [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Options = 0; XprType = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:132:22: required from 'Eigen::internal::dense_product_base::operator const Scalar() const [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Option = 0; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:22:56: required from 'double stan::mcmc::dense_e_metric::T(stan::mcmc::dense_e_point&) [with Model = model_scmet_namespace::model_scmet; BaseRNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:10: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:64: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: required from 'Eigen::internal::product_evaluator, ProductTag, LhsShape, RhsShape>::product_evaluator(const XprType&) [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Options = 0; int ProductTag = 6; LhsShape = Eigen::DenseShape; RhsShape = Eigen::DenseShape; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Matrix; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; XprType = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:35:90: required from 'Eigen::internal::evaluator >::evaluator(const XprType&) [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Options = 0; XprType = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:132:22: required from 'Eigen::internal::dense_product_base::operator const Scalar() const [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Option = 0; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:22:56: required from 'double stan::mcmc::dense_e_metric::T(stan::mcmc::dense_e_point&) [with Model = model_scmet_namespace::model_scmet; BaseRNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:10: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:197:43: required from 'static void Eigen::internal::gemv_dense_selector<1, StorageOrder, BlasCompatible>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; int StorageOrder = 0; bool BlasCompatible = true; typename Dest::Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:64: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: required from 'Eigen::internal::product_evaluator, ProductTag, LhsShape, RhsShape>::product_evaluator(const XprType&) [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Options = 0; int ProductTag = 6; LhsShape = Eigen::DenseShape; RhsShape = Eigen::DenseShape; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Matrix; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; XprType = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:35:90: required from 'Eigen::internal::evaluator >::evaluator(const XprType&) [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Options = 0; XprType = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:132:22: required from 'Eigen::internal::dense_product_base::operator const Scalar() const [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Option = 0; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:22:56: required from 'double stan::mcmc::dense_e_metric::T(stan::mcmc::dense_e_point&) [with Model = model_scmet_namespace::model_scmet; BaseRNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:10: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase > >, 2>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl >, Eigen::Dense>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose > >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/BlasUtil.h:464:13: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:64: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: required from 'Eigen::internal::product_evaluator, ProductTag, LhsShape, RhsShape>::product_evaluator(const XprType&) [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Options = 0; int ProductTag = 6; LhsShape = Eigen::DenseShape; RhsShape = Eigen::DenseShape; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Matrix; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; XprType = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:35:90: required from 'Eigen::internal::evaluator >::evaluator(const XprType&) [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Options = 0; XprType = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:132:22: required from 'Eigen::internal::dense_product_base::operator const Scalar() const [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Option = 0; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:22:56: required from 'double stan::mcmc::dense_e_metric::T(stan::mcmc::dense_e_point&) [with Model = model_scmet_namespace::model_scmet; BaseRNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:10: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, 1, true>, 0>': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, -1, 1, true>, 1>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, -1, 1, true>, 3>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, 1, true> >' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, -1, 1, true>, 0>' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:64: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: required from 'Eigen::internal::product_evaluator, ProductTag, LhsShape, RhsShape>::product_evaluator(const XprType&) [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Options = 0; int ProductTag = 6; LhsShape = Eigen::DenseShape; RhsShape = Eigen::DenseShape; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Matrix; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; XprType = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:35:90: required from 'Eigen::internal::evaluator >::evaluator(const XprType&) [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Options = 0; XprType = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>, Eigen::Matrix, 0>]' F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:132:22: required from 'Eigen::internal::dense_product_base::operator const Scalar() const [with Lhs = Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose > >, Eigen::Matrix, 0>; Rhs = Eigen::Matrix; int Option = 0; Scalar = double]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:22:56: required from 'double stan::mcmc::dense_e_metric::T(stan::mcmc::dense_e_point&) [with Model = model_scmet_namespace::model_scmet; BaseRNG = boost::random::additive_combine_engine, boost::random::linear_congruential_engine >]' F:/biocbuild/bbs-3.17-bioc/R/library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:10: required from here F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointMatrixVector.h: In function 'static void Eigen::internal::selfadjoint_product_impl::run(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; int LhsMode = 17; Rhs = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >]': F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointMatrixVector.h:227:7: warning: 'result' may be used uninitialized [-Wmaybe-uninitialized] 225 | internal::selfadjoint_matrix_vector_product::Flags&RowMajorBit) ? RowMajor : ColMajor, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 | int(LhsUpLo), bool(LhsBlasTraits::NeedToConjugate), bool(RhsBlasTraits::NeedToConjugate)>::run | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 | ( | ^ 228 | lhs.rows(), // size | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 | &lhs.coeffRef(0,0), lhs.outerStride(), // lhs info | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 | actualRhsPtr, // rhs info | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 | actualDestPtr, // result info | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 | actualAlpha // scale factor | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 | ); | ~ F:/biocbuild/bbs-3.17-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointMatrixVector.h:39:24: note: by argument 4 of type 'const double*' to 'static void Eigen::internal::selfadjoint_matrix_vector_product::run(Index, const Scalar*, Index, const Scalar*, Scalar*, Scalar) [with Scalar = double; Index = long long int; int StorageOrder = 0; int UpLo = 1; bool ConjugateLhs = false; bool ConjugateRhs = false; int Version = 0]' declared here 39 | EIGEN_DONT_INLINE void selfadjoint_matrix_vector_product::run( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -shared -s -static-libgcc -o scMET.dll tmp.def RcppExports.o stanExports_scmet.o -LF:/biocbuild/bbs-3.17-bioc/R/library/RcppParallel/lib/x64 -ltbb -ltbbmalloc -LF:/biocbuild/bbs-3.17-bioc/R/library/RcppParallel/lib/x64 -Wl,-rpath,F:/biocbuild/bbs-3.17-bioc/R/library/RcppParallel/lib/x64 -ltbb -ltbbmalloc -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR installing to F:/biocbuild/bbs-3.17-bioc/meat/scMET.buildbin-libdir/00LOCK-scMET/00new/scMET/libs/x64 ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'scMET' as scMET_1.2.0.zip * DONE (scMET)