Kylie A. Bemis
| Snapshot Date: 2023-10-15 14:00:13 -0400 (Sun, 15 Oct 2023) |
| git_url: https://git.bioconductor.org/packages/matter |
| git_branch: RELEASE_3_17 |
| git_last_commit: 54f665e |
| git_last_commit_date: 2023-04-25 10:50:19 -0400 (Tue, 25 Apr 2023) |
| Back to Multiple platform build/check report for BioC 3.17: simplified long |
|
This page was generated on 2023-10-16 11:36:18 -0400 (Mon, 16 Oct 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.2 LTS) | x86_64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4626 |
| palomino3 | Windows Server 2022 Datacenter | x64 | 4.3.1 (2023-06-16 ucrt) -- "Beagle Scouts" | 4379 |
| merida1 | macOS 12.6.4 Monterey | x86_64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4395 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1132/2230 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| matter 2.2.0 (landing page) Kylie A. Bemis
| nebbiolo1 | Linux (Ubuntu 22.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 12.6.4 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson2 | macOS 12.6.1 Monterey / arm64 | see weekly results here | ||||||||||||
|
To the developers/maintainers of the matter package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/matter.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: matter |
| Version: 2.2.0 |
| Command: F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:matter.install-out.txt --library=F:\biocbuild\bbs-3.17-bioc\R\library --no-vignettes --timings matter_2.2.0.tar.gz |
| StartedAt: 2023-10-16 03:43:04 -0400 (Mon, 16 Oct 2023) |
| EndedAt: 2023-10-16 03:44:48 -0400 (Mon, 16 Oct 2023) |
| EllapsedTime: 103.9 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: matter.Rcheck |
| Warnings: 0 |
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###
### Running command:
###
### F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:matter.install-out.txt --library=F:\biocbuild\bbs-3.17-bioc\R\library --no-vignettes --timings matter_2.2.0.tar.gz
###
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* using log directory 'F:/biocbuild/bbs-3.17-bioc/meat/matter.Rcheck'
* using R version 4.3.1 (2023-06-16 ucrt)
* using platform: x86_64-w64-mingw32 (64-bit)
* R was compiled by
gcc.exe (GCC) 12.2.0
GNU Fortran (GCC) 12.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'matter/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'matter' version '2.2.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'matter' can be installed ... OK
* used C++ compiler: 'G__~1.EXE (GCC) 12.2.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... NOTE
Note: information on .o files for x64 is not available
File 'F:/biocbuild/bbs-3.17-bioc/R/library/matter/libs/x64/matter.dll':
Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
Found 'exit', possibly from 'exit' (C), 'stop' (Fortran)
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs nor [v]sprintf. The detected symbols are linked into
the code but might come from libraries and not actually be called.
See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
Running 'testthat.R'
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
'F:/biocbuild/bbs-3.17-bioc/meat/matter.Rcheck/00check.log'
for details.
matter.Rcheck/00install.out
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###
### Running command:
###
### F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL matter
###
##############################################################################
##############################################################################
* installing to library 'F:/biocbuild/bbs-3.17-bioc/R/library'
* installing *source* package 'matter' ...
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 12.2.0'
g++ -std=gnu++17 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c altrep.cpp -o altrep.o
In file included from matter.h:5,
from altrep.cpp:3:
atoms.h: In member function 'AtomInfo Atoms::find_atom(index_t, int)':
atoms.h:191:50: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'long long unsigned int' [-Wsign-compare]
191 | if ( j <= i && i < j + len ) {
| ~~^~~~~~~~~
atoms.h: In member function 'SEXPREC* Atoms::regroup_index(size_t)':
atoms.h:644:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
644 | for ( index_t i = 0; i < ngroups; i++ )
| ~~^~~~~~~~~
atoms.h:654:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
654 | for ( index_t i = 0; i < ngroups; i++ )
| ~~^~~~~~~~~
matter.h: In member function 'void MatterArray::set_region(index_t, size_t, SEXP)':
matter.h:178:35: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
178 | if ( size > XLENGTH(value) && stride != 0 ) {
| ~~~~~^~~~~~~~~~~~~~~~
matter.h: In member function 'SEXPREC* MatterList::get_elements(SEXP, SEXP)':
matter.h:634:47: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
634 | for ( size_t k = 0; k < len; k++ )
| ~~^~~~~
matter.h: In member function 'void MatterList::set_elements(SEXP, SEXP, SEXP)':
matter.h:658:47: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
658 | for ( size_t k = 0; k < len; k++ )
| ~~^~~~~
matter.h: In member function 'SEXPREC* MatterStringList::get_strings(SEXP, SEXP)':
matter.h:730:47: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
730 | for ( size_t k = 0; k < len; k++ )
| ~~^~~~~
matter.h: In member function 'void MatterStringList::set_strings(SEXP, SEXP, SEXP)':
matter.h:754:47: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
754 | for ( size_t k = 0; k < len; k++ )
| ~~^~~~~
In file included from atoms.h:9:
drle.h: In instantiation of 'CompressedVector<T>::CompressedVector(SEXP) [with T = int; SEXP = SEXPREC*]':
drle.h:422:53: required from here
drle.h:209:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
209 | for ( size_t i = 0; i < _truelength; i++ )
| ~~^~~~~~~~~~~~~
drle.h:213:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
213 | for ( size_t i = 0; i < _truelength; i++ )
| ~~^~~~~~~~~~~~~
drle.h: In instantiation of 'CompressedVector<T>::CompressedVector(SEXP) [with T = double; SEXP = SEXPREC*]':
drle.h:583:32: required from here
drle.h:209:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
209 | for ( size_t i = 0; i < _truelength; i++ )
| ~~^~~~~~~~~~~~~
drle.h:213:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
213 | for ( size_t i = 0; i < _truelength; i++ )
| ~~^~~~~~~~~~~~~
matter.h: In instantiation of 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]':
matter.h:153:16: required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
73 | size = len - i > size ? size : len - i;
| ~~~~~~~~^~~~~~
matter.h: In instantiation of 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = int; size_t = long long unsigned int; index_t = long long int]':
matter.h:157:16: required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
matter.h: In instantiation of 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = double; size_t = long long unsigned int; index_t = long long int]':
matter.h:165:16: required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
matter.h: In instantiation of 'size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]':
matter.h:184:16: required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
96 | size = len - i > size ? size : len - i;
| ~~~~~~~~^~~~~~
matter.h: In instantiation of 'size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = int; size_t = long long unsigned int; index_t = long long int]':
matter.h:187:16: required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
matter.h: In instantiation of 'size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = double; size_t = long long unsigned int; index_t = long long int]':
matter.h:193:16: required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
matter.h: In instantiation of 'size_t MatterMatrix::get_submatrix(SEXP, SEXP, T*, int) [with T = unsigned char; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:399:19: required from here
matter.h:293:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
293 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:310:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
310 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
matter.h: In instantiation of 'size_t MatterMatrix::get_submatrix(SEXP, SEXP, T*, int) [with T = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:403:19: required from here
matter.h:293:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
293 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:310:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
310 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
matter.h: In instantiation of 'size_t MatterMatrix::get_submatrix(SEXP, SEXP, T*, int) [with T = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:411:19: required from here
matter.h:293:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
293 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:310:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
310 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
matter.h: In instantiation of 'size_t MatterMatrix::set_submatrix(SEXP, SEXP, T*, int) [with T = unsigned char; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:436:19: required from here
matter.h:348:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
348 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:367:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
367 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
matter.h: In instantiation of 'size_t MatterMatrix::set_submatrix(SEXP, SEXP, T*, int) [with T = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:439:19: required from here
matter.h:348:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
348 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:367:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
367 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
matter.h: In instantiation of 'size_t MatterMatrix::set_submatrix(SEXP, SEXP, T*, int) [with T = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:445:19: required from here
matter.h:348:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
348 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:367:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
367 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
drle.h: In instantiation of 'size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = int; Tlen = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:557:22: required from 'SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = int; SEXP = SEXPREC*]'
drle.h:580:22: required from here
drle.h:533:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
533 | while ( i < XLENGTH(indx) && j < nruns )
| ~~^~~~~~~~~~~~~~~
drle.h: In instantiation of 'size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = int; Tlen = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:561:25: required from 'SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = int; SEXP = SEXPREC*]'
drle.h:580:22: required from here
drle.h:533:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
drle.h: In instantiation of 'size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = double; Tlen = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:557:22: required from 'SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = double; SEXP = SEXPREC*]'
drle.h:584:22: required from here
drle.h:533:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
drle.h: In instantiation of 'size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = double; Tlen = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:561:25: required from 'SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = double; SEXP = SEXPREC*]'
drle.h:584:22: required from here
drle.h:533:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
drle.h: In instantiation of 'size_t CompressedVector<T>::getElements(SEXP, T*) [with T = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:369:15: required from 'SEXPREC* CompressedVector<T>::getElements(SEXP) [with T = int; SEXP = SEXPREC*]'
drle.h:599:24: required from here
drle.h:352:40: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
352 | for ( j = 0; j < ni; j++ )
| ~~^~~~
drle.h: In instantiation of 'size_t CompressedVector<T>::getElements(SEXP, T*) [with T = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:369:15: required from 'SEXPREC* CompressedVector<T>::getElements(SEXP) [with T = double; SEXP = SEXPREC*]'
drle.h:603:24: required from here
drle.h:352:40: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
In file included from matter.h:6:
ops.h: In instantiation of 'size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]':
matter.h:83:20: required from 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:153:16: required from here
ops.h:187:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
187 | for ( index_t j = 0; j < size; j++ )
| ~~^~~~~~
ops.h: In instantiation of 'size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]':
matter.h:83:20: required from 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:157:16: required from here
ops.h:187:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
ops.h: In instantiation of 'size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]':
matter.h:83:20: required from 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:165:16: required from here
ops.h:187:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
In file included from altrep.cpp:2:
matterDefines.h: In instantiation of 'size_t ArrayInterface::transpose_index(T*, SEXP, bool) [with T = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:116:20: required from 'size_t MatterArray::get_elements(SEXP, T*, int) [with T = unsigned char; size_t = long long unsigned int; SEXP = SEXPREC*]'
matter.h:209:18: required from here
matterDefines.h:320:47: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
320 | for ( size_t j = 0; j < XLENGTH(indx); j++ )
| ~~^~~~~~~~~~~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:318:30: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:320:39: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:322:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:324:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:326:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:328:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:330:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long unsigned int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:332:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:334:31: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:336:32: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:318:30: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:320:39: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:322:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:324:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:326:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:328:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:330:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long unsigned int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:332:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:334:31: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:336:32: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:318:30: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:320:39: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:322:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:324:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:326:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:328:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:330:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long unsigned int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:332:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:334:31: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:336:32: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:318:30: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:320:39: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:322:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:324:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:326:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:328:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:330:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long unsigned int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:332:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:334:31: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:336:32: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:347:31: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:349:40: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:351:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:353:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:355:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:357:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long long int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:359:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long long unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:361:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = float; size_t = long long unsigned int; index_t = long long int]':
atoms.h:363:32: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:365:33: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:347:31: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:349:40: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = short int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:351:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = short unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:353:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:355:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:357:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = long long int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:359:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = long long unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:361:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = float; size_t = long long unsigned int; index_t = long long int]':
atoms.h:363:32: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:365:33: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:347:31: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:349:40: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = short int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:351:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = short unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:353:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:355:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:357:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = long long int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:359:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = long long unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:361:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = float; size_t = long long unsigned int; index_t = long long int]':
atoms.h:363:32: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:365:33: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:347:31: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:349:40: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = short int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:351:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = short unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:353:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:355:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:357:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = long long int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:359:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = long long unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:361:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = float; size_t = long long unsigned int; index_t = long long int]':
atoms.h:363:32: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:365:33: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
g++ -std=gnu++17 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c init.cpp -o init.o
In file included from matterExports.h:6,
from init.cpp:3:
atoms.h: In member function 'AtomInfo Atoms::find_atom(index_t, int)':
atoms.h:191:50: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'long long unsigned int' [-Wsign-compare]
191 | if ( j <= i && i < j + len ) {
| ~~^~~~~~~~~
atoms.h: In member function 'SEXPREC* Atoms::regroup_index(size_t)':
atoms.h:644:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
644 | for ( index_t i = 0; i < ngroups; i++ )
| ~~^~~~~~~~~
atoms.h:654:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
654 | for ( index_t i = 0; i < ngroups; i++ )
| ~~^~~~~~~~~
In file included from matterExports.h:7:
matter.h: In member function 'void MatterArray::set_region(index_t, size_t, SEXP)':
matter.h:178:35: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
178 | if ( size > XLENGTH(value) && stride != 0 ) {
| ~~~~~^~~~~~~~~~~~~~~~
matter.h: In member function 'SEXPREC* MatterList::get_elements(SEXP, SEXP)':
matter.h:634:47: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
634 | for ( size_t k = 0; k < len; k++ )
| ~~^~~~~
matter.h: In member function 'void MatterList::set_elements(SEXP, SEXP, SEXP)':
matter.h:658:47: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
658 | for ( size_t k = 0; k < len; k++ )
| ~~^~~~~
matter.h: In member function 'SEXPREC* MatterStringList::get_strings(SEXP, SEXP)':
matter.h:730:47: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
730 | for ( size_t k = 0; k < len; k++ )
| ~~^~~~~
matter.h: In member function 'void MatterStringList::set_strings(SEXP, SEXP, SEXP)':
matter.h:754:47: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
754 | for ( size_t k = 0; k < len; k++ )
| ~~^~~~~
In file included from matterExports.h:5:
drle.h: In instantiation of 'CompressedVector<T>::CompressedVector(SEXP) [with T = int; SEXP = SEXPREC*]':
drle.h:422:53: required from here
drle.h:209:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
209 | for ( size_t i = 0; i < _truelength; i++ )
| ~~^~~~~~~~~~~~~
drle.h:213:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
213 | for ( size_t i = 0; i < _truelength; i++ )
| ~~^~~~~~~~~~~~~
drle.h: In instantiation of 'CompressedVector<T>::CompressedVector(SEXP) [with T = double; SEXP = SEXPREC*]':
drle.h:583:32: required from here
drle.h:209:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
209 | for ( size_t i = 0; i < _truelength; i++ )
| ~~^~~~~~~~~~~~~
drle.h:213:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
213 | for ( size_t i = 0; i < _truelength; i++ )
| ~~^~~~~~~~~~~~~
matter.h: In instantiation of 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]':
matter.h:153:16: required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
73 | size = len - i > size ? size : len - i;
| ~~~~~~~~^~~~~~
matter.h: In instantiation of 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = int; size_t = long long unsigned int; index_t = long long int]':
matter.h:157:16: required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
matter.h: In instantiation of 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = double; size_t = long long unsigned int; index_t = long long int]':
matter.h:165:16: required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
matter.h: In instantiation of 'size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]':
matter.h:184:16: required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
96 | size = len - i > size ? size : len - i;
| ~~~~~~~~^~~~~~
matter.h: In instantiation of 'size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = int; size_t = long long unsigned int; index_t = long long int]':
matter.h:187:16: required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
matter.h: In instantiation of 'size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = double; size_t = long long unsigned int; index_t = long long int]':
matter.h:193:16: required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
matter.h: In instantiation of 'size_t MatterMatrix::get_submatrix(SEXP, SEXP, T*, int) [with T = unsigned char; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:399:19: required from here
matter.h:293:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
293 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:310:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
310 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
matter.h: In instantiation of 'size_t MatterMatrix::get_submatrix(SEXP, SEXP, T*, int) [with T = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:403:19: required from here
matter.h:293:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
293 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:310:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
310 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
matter.h: In instantiation of 'size_t MatterMatrix::get_submatrix(SEXP, SEXP, T*, int) [with T = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:411:19: required from here
matter.h:293:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
293 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:310:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
310 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
matter.h: In instantiation of 'size_t MatterMatrix::set_submatrix(SEXP, SEXP, T*, int) [with T = unsigned char; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:436:19: required from here
matter.h:348:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
348 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:367:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
367 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
matter.h: In instantiation of 'size_t MatterMatrix::set_submatrix(SEXP, SEXP, T*, int) [with T = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:439:19: required from here
matter.h:348:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
348 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:367:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
367 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
matter.h: In instantiation of 'size_t MatterMatrix::set_submatrix(SEXP, SEXP, T*, int) [with T = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:445:19: required from here
matter.h:348:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
348 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:367:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
367 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
In file included from matterExports.h:9:
sparse.h: In instantiation of 'size_t SparseMatrix::get_submatrix(SEXP, SEXP, Tval*, int) [with Tind = int; Tval = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
sparse.h:575:30: required from here
sparse.h:528:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
528 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
sparse.h:545:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
545 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
sparse.h: In instantiation of 'size_t SparseMatrix::get_submatrix(SEXP, SEXP, Tval*, int) [with Tind = double; Tval = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
sparse.h:578:33: required from here
sparse.h:528:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
528 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
sparse.h:545:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
545 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
sparse.h: In instantiation of 'size_t SparseMatrix::get_submatrix(SEXP, SEXP, Tval*, int) [with Tind = int; Tval = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
sparse.h:588:33: required from here
sparse.h:528:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
528 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
sparse.h:545:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
545 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
sparse.h: In instantiation of 'size_t SparseMatrix::get_submatrix(SEXP, SEXP, Tval*, int) [with Tind = double; Tval = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
sparse.h:591:36: required from here
sparse.h:528:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
528 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
sparse.h:545:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
545 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
drle.h: In instantiation of 'size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = int; Tlen = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:557:22: required from 'SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = int; SEXP = SEXPREC*]'
drle.h:580:22: required from here
drle.h:533:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
533 | while ( i < XLENGTH(indx) && j < nruns )
| ~~^~~~~~~~~~~~~~~
drle.h: In instantiation of 'size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = int; Tlen = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:561:25: required from 'SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = int; SEXP = SEXPREC*]'
drle.h:580:22: required from here
drle.h:533:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
drle.h: In instantiation of 'size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = double; Tlen = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:557:22: required from 'SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = double; SEXP = SEXPREC*]'
drle.h:584:22: required from here
drle.h:533:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
drle.h: In instantiation of 'size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = double; Tlen = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:561:25: required from 'SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = double; SEXP = SEXPREC*]'
drle.h:584:22: required from here
drle.h:533:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
drle.h: In instantiation of 'size_t CompressedVector<T>::getElements(SEXP, T*) [with T = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:369:15: required from 'SEXPREC* CompressedVector<T>::getElements(SEXP) [with T = int; SEXP = SEXPREC*]'
drle.h:599:24: required from here
drle.h:352:40: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
352 | for ( j = 0; j < ni; j++ )
| ~~^~~~
drle.h: In instantiation of 'size_t CompressedVector<T>::getElements(SEXP, T*) [with T = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:369:15: required from 'SEXPREC* CompressedVector<T>::getElements(SEXP) [with T = double; SEXP = SEXPREC*]'
drle.h:603:24: required from here
drle.h:352:40: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
In file included from matter.h:6:
ops.h: In instantiation of 'size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]':
matter.h:83:20: required from 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:153:16: required from here
ops.h:187:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
187 | for ( index_t j = 0; j < size; j++ )
| ~~^~~~~~
ops.h: In instantiation of 'size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]':
matter.h:83:20: required from 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:157:16: required from here
ops.h:187:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
ops.h: In instantiation of 'size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]':
matter.h:83:20: required from 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:165:16: required from here
ops.h:187:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
In file included from drle.h:4:
matterDefines.h: In instantiation of 'size_t ArrayInterface::transpose_index(T*, SEXP, bool) [with T = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:116:20: required from 'size_t MatterArray::get_elements(SEXP, T*, int) [with T = unsigned char; size_t = long long unsigned int; SEXP = SEXPREC*]'
matter.h:209:18: required from here
matterDefines.h:320:47: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
320 | for ( size_t j = 0; j < XLENGTH(indx); j++ )
| ~~^~~~~~~~~~~~~~~
In file included from matterExports.h:8:
search.h: In instantiation of 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = int; Tval = int; index_t = long long int; size_t = long long unsigned int]':
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = int; Tval = int; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:289:31: required from here
search.h:225:53: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
225 | for ( index_t i = pos[j]; i < xlen; i++ )
| ~~^~~~~~
search.h: In instantiation of 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = double; Tval = int; index_t = long long int; size_t = long long unsigned int]':
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = double; Tval = int; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:293:34: required from here
search.h:225:53: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
search.h: In instantiation of 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = SEXPREC*; Tval = int; index_t = long long int; size_t = long long unsigned int]':
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = SEXPREC*; Tval = int; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:297:32: required from here
search.h:225:53: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
search.h: In instantiation of 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = int; Tval = double; index_t = long long int; size_t = long long unsigned int]':
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = int; Tval = double; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:307:34: required from here
search.h:225:53: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
search.h: In instantiation of 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = double; Tval = double; index_t = long long int; size_t = long long unsigned int]':
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = double; Tval = double; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:311:37: required from here
search.h:225:53: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
search.h: In instantiation of 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = SEXPREC*; Tval = double; index_t = long long int; size_t = long long unsigned int]':
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = SEXPREC*; Tval = double; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:315:35: required from here
search.h:225:53: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
sparse.h: In instantiation of 'size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long long unsigned int; index_t = long long int]':
sparse.h:402:43: required from 'size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long long unsigned int; index_t = long long int]'
sparse.h:433:27: required from here
sparse.h:336:48: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
336 | if ( i < 0 || i + size > sparse_extent() )
| ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h:362:59: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
362 | if ( ii < 0 || ii >= size )
| ~~~^~~~~~~
sparse.h: In instantiation of 'size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long long unsigned int; index_t = long long int]':
sparse.h:402:43: required from 'size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long long unsigned int; index_t = long long int]'
sparse.h:436:30: required from here
sparse.h:336:48: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
336 | if ( i < 0 || i + size > sparse_extent() )
| ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h:362:59: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
362 | if ( ii < 0 || ii >= size )
| ~~~^~~~~~~
sparse.h: In instantiation of 'size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long long unsigned int; index_t = long long int]':
sparse.h:402:43: required from 'size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long long unsigned int; index_t = long long int]'
sparse.h:446:30: required from here
sparse.h:336:48: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
336 | if ( i < 0 || i + size > sparse_extent() )
| ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h:362:59: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
362 | if ( ii < 0 || ii >= size )
| ~~~^~~~~~~
sparse.h: In instantiation of 'size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = double; size_t = long long unsigned int; index_t = long long int]':
sparse.h:402:43: required from 'size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = double; size_t = long long unsigned int; index_t = long long int]'
sparse.h:449:33: required from here
sparse.h:336:48: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
336 | if ( i < 0 || i + size > sparse_extent() )
| ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h:362:59: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
362 | if ( ii < 0 || ii >= size )
| ~~~^~~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:318:30: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:320:39: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:322:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:324:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:326:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:328:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:330:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long unsigned int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:332:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:334:31: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:336:32: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:477:31: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:318:30: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:320:39: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:322:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:324:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:326:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:328:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:330:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long unsigned int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:332:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:334:31: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:336:32: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:481:29: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:318:30: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:320:39: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:322:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:324:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:326:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:328:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:330:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long unsigned int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:332:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:334:31: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:336:32: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:489:32: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:318:30: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:320:39: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:322:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:324:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:326:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:328:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:330:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long unsigned int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:332:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:334:31: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:336:32: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:347:31: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:349:40: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:351:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:353:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:355:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:357:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long long int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:359:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long long unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:361:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = float; size_t = long long unsigned int; index_t = long long int]':
atoms.h:363:32: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:365:33: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:520:31: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:347:31: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:349:40: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = short int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:351:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = short unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:353:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:355:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:357:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = long long int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:359:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = long long unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:361:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = float; size_t = long long unsigned int; index_t = long long int]':
atoms.h:363:32: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:365:33: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:523:29: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:347:31: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:349:40: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = short int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:351:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = short unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:353:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:355:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:357:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = long long int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:359:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = long long unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:361:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = float; size_t = long long unsigned int; index_t = long long int]':
atoms.h:363:32: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:365:33: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:529:32: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:347:31: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:349:40: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = short int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:351:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = short unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:353:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:355:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:357:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = long long int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:359:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = long long unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:361:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = float; size_t = long long unsigned int; index_t = long long int]':
atoms.h:363:32: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:365:33: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
In file included from search.h:5:
signal.h: In instantiation of 'Ty interp1(Tx, Tx*, Ty*, size_t, size_t, double, int, int, bool) [with Tx = int; Ty = int; size_t = long long unsigned int]':
search.h:229:30: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = int; Tval = int; index_t = long long int; size_t = long long unsigned int]'
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = int; Tval = int; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:289:31: required from here
signal.h:97:43: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
97 | for ( index_t i = init; i < end && i >= 0; i += k )
| ~~^~~~~
signal.h: In instantiation of 'Ty interp1(Tx, Tx*, Ty*, size_t, size_t, double, int, int, bool) [with Tx = double; Ty = int; size_t = long long unsigned int]':
search.h:229:30: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = double; Tval = int; index_t = long long int; size_t = long long unsigned int]'
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = double; Tval = int; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:293:34: required from here
signal.h:97:43: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
signal.h: In instantiation of 'Ty interp1(Tx, Tx*, Ty*, size_t, size_t, double, int, int, bool) [with Tx = SEXPREC*; Ty = int; size_t = long long unsigned int]':
search.h:229:30: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = SEXPREC*; Tval = int; index_t = long long int; size_t = long long unsigned int]'
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = SEXPREC*; Tval = int; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:297:32: required from here
signal.h:97:43: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
signal.h: In instantiation of 'Ty interp1(Tx, Tx*, Ty*, size_t, size_t, double, int, int, bool) [with Tx = int; Ty = double; size_t = long long unsigned int]':
search.h:229:30: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = int; Tval = double; index_t = long long int; size_t = long long unsigned int]'
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = int; Tval = double; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:307:34: required from here
signal.h:97:43: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
signal.h: In instantiation of 'Ty interp1(Tx, Tx*, Ty*, size_t, size_t, double, int, int, bool) [with Tx = double; Ty = double; size_t = long long unsigned int]':
search.h:229:30: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = double; Tval = double; index_t = long long int; size_t = long long unsigned int]'
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = double; Tval = double; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:311:37: required from here
signal.h:97:43: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
signal.h: In instantiation of 'Ty interp1(Tx, Tx*, Ty*, size_t, size_t, double, int, int, bool) [with Tx = SEXPREC*; Ty = double; size_t = long long unsigned int]':
search.h:229:30: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = SEXPREC*; Tval = double; index_t = long long int; size_t = long long unsigned int]'
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = SEXPREC*; Tval = double; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:315:35: required from here
signal.h:97:43: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
sparse.h: In instantiation of 'void SparseArray::copy_domain(index_t, size_t, T*) [with T = int; index_t = long long int; size_t = long long unsigned int]':
sparse.h:349:22: required from 'size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long long unsigned int; index_t = long long int]'
sparse.h:402:43: required from 'size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long long unsigned int; index_t = long long int]'
sparse.h:433:27: required from here
sparse.h:190:48: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
190 | if ( i < 0 || i + size > sparse_extent() )
| ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h: In instantiation of 'void SparseArray::copy_domain(index_t, size_t, T*) [with T = double; index_t = long long int; size_t = long long unsigned int]':
sparse.h:349:22: required from 'size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long long unsigned int; index_t = long long int]'
sparse.h:402:43: required from 'size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long long unsigned int; index_t = long long int]'
sparse.h:436:30: required from here
sparse.h:190:48: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
In file included from init.cpp:4:
altrep.h: At global scope:
altrep.h:18:25: warning: 'matter_altstring' defined but not used [-Wunused-variable]
18 | static R_altrep_class_t matter_altstring;
| ^~~~~~~~~~~~~~~~
altrep.h:17:25: warning: 'matter_altreal' defined but not used [-Wunused-variable]
17 | static R_altrep_class_t matter_altreal;
| ^~~~~~~~~~~~~~
altrep.h:16:25: warning: 'matter_altinteger' defined but not used [-Wunused-variable]
16 | static R_altrep_class_t matter_altinteger;
| ^~~~~~~~~~~~~~~~~
altrep.h:15:25: warning: 'matter_altlogical' defined but not used [-Wunused-variable]
15 | static R_altrep_class_t matter_altlogical;
| ^~~~~~~~~~~~~~~~~
altrep.h:14:25: warning: 'matter_altraw' defined but not used [-Wunused-variable]
14 | static R_altrep_class_t matter_altraw;
| ^~~~~~~~~~~~~
g++ -std=gnu++17 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c matterExports.cpp -o matterExports.o
In file included from matterExports.h:6,
from matterExports.cpp:2:
atoms.h: In member function 'AtomInfo Atoms::find_atom(index_t, int)':
atoms.h:191:50: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'long long unsigned int' [-Wsign-compare]
191 | if ( j <= i && i < j + len ) {
| ~~^~~~~~~~~
atoms.h: In member function 'SEXPREC* Atoms::regroup_index(size_t)':
atoms.h:644:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
644 | for ( index_t i = 0; i < ngroups; i++ )
| ~~^~~~~~~~~
atoms.h:654:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
654 | for ( index_t i = 0; i < ngroups; i++ )
| ~~^~~~~~~~~
In file included from matterExports.h:7:
matter.h: In member function 'void MatterArray::set_region(index_t, size_t, SEXP)':
matter.h:178:35: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
178 | if ( size > XLENGTH(value) && stride != 0 ) {
| ~~~~~^~~~~~~~~~~~~~~~
matter.h: In member function 'SEXPREC* MatterList::get_elements(SEXP, SEXP)':
matter.h:634:47: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
634 | for ( size_t k = 0; k < len; k++ )
| ~~^~~~~
matter.h: In member function 'void MatterList::set_elements(SEXP, SEXP, SEXP)':
matter.h:658:47: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
658 | for ( size_t k = 0; k < len; k++ )
| ~~^~~~~
matter.h: In member function 'SEXPREC* MatterStringList::get_strings(SEXP, SEXP)':
matter.h:730:47: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
730 | for ( size_t k = 0; k < len; k++ )
| ~~^~~~~
matter.h: In member function 'void MatterStringList::set_strings(SEXP, SEXP, SEXP)':
matter.h:754:47: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
754 | for ( size_t k = 0; k < len; k++ )
| ~~^~~~~
In file included from matterExports.h:5:
drle.h: In instantiation of 'CompressedVector<T>::CompressedVector(SEXP) [with T = int; SEXP = SEXPREC*]':
drle.h:422:53: required from here
drle.h:209:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
209 | for ( size_t i = 0; i < _truelength; i++ )
| ~~^~~~~~~~~~~~~
drle.h:213:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
213 | for ( size_t i = 0; i < _truelength; i++ )
| ~~^~~~~~~~~~~~~
drle.h: In instantiation of 'CompressedVector<T>::CompressedVector(SEXP) [with T = double; SEXP = SEXPREC*]':
drle.h:583:32: required from here
drle.h:209:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
209 | for ( size_t i = 0; i < _truelength; i++ )
| ~~^~~~~~~~~~~~~
drle.h:213:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
213 | for ( size_t i = 0; i < _truelength; i++ )
| ~~^~~~~~~~~~~~~
matter.h: In instantiation of 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]':
matter.h:153:16: required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
73 | size = len - i > size ? size : len - i;
| ~~~~~~~~^~~~~~
matter.h: In instantiation of 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = int; size_t = long long unsigned int; index_t = long long int]':
matter.h:157:16: required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
matter.h: In instantiation of 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = double; size_t = long long unsigned int; index_t = long long int]':
matter.h:165:16: required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
matter.h: In instantiation of 'size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]':
matter.h:184:16: required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
96 | size = len - i > size ? size : len - i;
| ~~~~~~~~^~~~~~
matter.h: In instantiation of 'size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = int; size_t = long long unsigned int; index_t = long long int]':
matter.h:187:16: required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
matter.h: In instantiation of 'size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = double; size_t = long long unsigned int; index_t = long long int]':
matter.h:193:16: required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
matter.h: In instantiation of 'size_t MatterMatrix::get_submatrix(SEXP, SEXP, T*, int) [with T = unsigned char; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:399:19: required from here
matter.h:293:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
293 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:310:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
310 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
matter.h: In instantiation of 'size_t MatterMatrix::get_submatrix(SEXP, SEXP, T*, int) [with T = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:403:19: required from here
matter.h:293:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
293 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:310:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
310 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
matter.h: In instantiation of 'size_t MatterMatrix::get_submatrix(SEXP, SEXP, T*, int) [with T = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:411:19: required from here
matter.h:293:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
293 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:310:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
310 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
matter.h: In instantiation of 'size_t MatterMatrix::set_submatrix(SEXP, SEXP, T*, int) [with T = unsigned char; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:436:19: required from here
matter.h:348:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
348 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:367:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
367 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
matter.h: In instantiation of 'size_t MatterMatrix::set_submatrix(SEXP, SEXP, T*, int) [with T = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:439:19: required from here
matter.h:348:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
348 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:367:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
367 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
matter.h: In instantiation of 'size_t MatterMatrix::set_submatrix(SEXP, SEXP, T*, int) [with T = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:445:19: required from here
matter.h:348:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
348 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
matter.h:367:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
367 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
In file included from matterExports.h:9:
sparse.h: In instantiation of 'size_t SparseMatrix::get_submatrix(SEXP, SEXP, Tval*, int) [with Tind = int; Tval = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
sparse.h:575:30: required from here
sparse.h:528:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
528 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
sparse.h:545:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
545 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
sparse.h: In instantiation of 'size_t SparseMatrix::get_submatrix(SEXP, SEXP, Tval*, int) [with Tind = double; Tval = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
sparse.h:578:33: required from here
sparse.h:528:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
528 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
sparse.h:545:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
545 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
sparse.h: In instantiation of 'size_t SparseMatrix::get_submatrix(SEXP, SEXP, Tval*, int) [with Tind = int; Tval = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
sparse.h:588:33: required from here
sparse.h:528:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
528 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
sparse.h:545:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
545 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
sparse.h: In instantiation of 'size_t SparseMatrix::get_submatrix(SEXP, SEXP, Tval*, int) [with Tind = double; Tval = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
sparse.h:591:36: required from here
sparse.h:528:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
528 | for ( size_t k = 0; k < nr; k++ )
| ~~^~~~
sparse.h:545:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
545 | for ( size_t k = 0; k < nc; k++ )
| ~~^~~~
atoms.h: In instantiation of 'SEXPREC* Atoms::subset_index(T*, size_t, bool) [with T = int; SEXP = SEXPREC*; size_t = long long unsigned int]':
matterExports.cpp:172:31: required from here
atoms.h:552:43: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
552 | while ( i < size )
| ~~^~~~~~
atoms.h:572:43: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
572 | while ( i < size )
| ~~^~~~~~
atoms.h: In instantiation of 'SEXPREC* Atoms::subset_index(T*, size_t, bool) [with T = double; SEXP = SEXPREC*; size_t = long long unsigned int]':
matterExports.cpp:174:34: required from here
atoms.h:552:43: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
552 | while ( i < size )
| ~~^~~~~~
atoms.h:572:43: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
572 | while ( i < size )
| ~~^~~~~~
In file included from search.h:5,
from matterExports.h:8:
signal.h: In instantiation of 'void bin_vector(T*, int, int*, int*, double*, int, int) [with T = int]':
matterExports.cpp:287:14: required from here
signal.h:239:31: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
239 | for ( size_t i = 0; i < nbin; i++ ) {
| ~~^~~~~~
signal.h:245:50: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
245 | for ( size_t j = lower[i] - 1; j < upper[i] && j < n; j++ )
| ~~^~~~~~~~~~
signal.h:245:66: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
245 | for ( size_t j = lower[i] - 1; j < upper[i] && j < n; j++ )
| ~~^~~
signal.h: In instantiation of 'void bin_vector(T*, int, int*, int*, double*, int, int) [with T = double]':
matterExports.cpp:291:14: required from here
signal.h:239:31: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
239 | for ( size_t i = 0; i < nbin; i++ ) {
| ~~^~~~~~
signal.h:245:50: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
245 | for ( size_t j = lower[i] - 1; j < upper[i] && j < n; j++ )
| ~~^~~~~~~~~~
signal.h:245:66: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
245 | for ( size_t j = lower[i] - 1; j < upper[i] && j < n; j++ )
| ~~^~~
signal.h: In instantiation of 'size_t local_maxima(T*, size_t, int, int*) [with T = int; size_t = long long unsigned int]':
matterExports.cpp:307:16: required from here
signal.h:272:28: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
272 | for ( int i = 0; i < n; i++ )
| ~~^~~
signal.h:275:33: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
275 | if ( i < r || i > n - r )
| ~~^~~~~~~
signal.h:278:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
278 | b = (i + r) < n - 1 ? (i + r) : n - 1;
| ~~~~~~~~^~~~~~~
signal.h: In instantiation of 'size_t local_maxima(T*, size_t, int, int*) [with T = double; size_t = long long unsigned int]':
matterExports.cpp:311:16: required from here
signal.h:272:28: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
272 | for ( int i = 0; i < n; i++ )
| ~~^~~
signal.h:275:33: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
275 | if ( i < r || i > n - r )
| ~~^~~~~~~
signal.h:278:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
278 | b = (i + r) < n - 1 ? (i + r) : n - 1;
| ~~~~~~~~^~~~~~~
signal.h: In instantiation of 'size_t peak_boundaries(T*, size_t, int, int*, size_t, int*, int*) [with T = int; size_t = long long unsigned int]':
matterExports.cpp:329:19: required from here
signal.h:304:28: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
304 | for ( int i = 0; i < npeaks; i++ )
| ~~^~~~~~~~
signal.h:329:47: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
329 | for ( int j = peaks[i] + 1; j < n; j++ )
| ~~^~~
signal.h:335:49: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
335 | int b = (j + r) < n - 1 ? (j + r) : n - 1;
| ~~~~~~~~^~~~~~~
signal.h: In instantiation of 'size_t peak_boundaries(T*, size_t, int, int*, size_t, int*, int*) [with T = double; size_t = long long unsigned int]':
matterExports.cpp:334:19: required from here
signal.h:304:28: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
304 | for ( int i = 0; i < npeaks; i++ )
| ~~^~~~~~~~
signal.h:329:47: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
329 | for ( int j = peaks[i] + 1; j < n; j++ )
| ~~^~~
signal.h:335:49: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
335 | int b = (j + r) < n - 1 ? (j + r) : n - 1;
| ~~~~~~~~^~~~~~~
drle.h: In instantiation of 'size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = int; Tlen = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:557:22: required from 'SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = int; SEXP = SEXPREC*]'
drle.h:580:22: required from here
drle.h:533:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
533 | while ( i < XLENGTH(indx) && j < nruns )
| ~~^~~~~~~~~~~~~~~
drle.h: In instantiation of 'size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = int; Tlen = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:561:25: required from 'SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = int; SEXP = SEXPREC*]'
drle.h:580:22: required from here
drle.h:533:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
drle.h: In instantiation of 'size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = double; Tlen = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:557:22: required from 'SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = double; SEXP = SEXPREC*]'
drle.h:584:22: required from here
drle.h:533:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
drle.h: In instantiation of 'size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = double; Tlen = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:561:25: required from 'SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = double; SEXP = SEXPREC*]'
drle.h:584:22: required from here
drle.h:533:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
drle.h: In instantiation of 'size_t CompressedVector<T>::getElements(SEXP, T*) [with T = int; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:369:15: required from 'SEXPREC* CompressedVector<T>::getElements(SEXP) [with T = int; SEXP = SEXPREC*]'
drle.h:599:24: required from here
drle.h:352:40: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
352 | for ( j = 0; j < ni; j++ )
| ~~^~~~
drle.h: In instantiation of 'size_t CompressedVector<T>::getElements(SEXP, T*) [with T = double; size_t = long long unsigned int; SEXP = SEXPREC*]':
drle.h:369:15: required from 'SEXPREC* CompressedVector<T>::getElements(SEXP) [with T = double; SEXP = SEXPREC*]'
drle.h:603:24: required from here
drle.h:352:40: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
In file included from matter.h:6:
ops.h: In instantiation of 'size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]':
matter.h:83:20: required from 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matter.h:153:16: required from here
ops.h:187:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
187 | for ( index_t j = 0; j < size; j++ )
| ~~^~~~~~
ops.h: In instantiation of 'size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]':
matter.h:83:20: required from 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matter.h:157:16: required from here
ops.h:187:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
ops.h: In instantiation of 'size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]':
matter.h:83:20: required from 'size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matter.h:165:16: required from here
ops.h:187:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
In file included from drle.h:4:
matterDefines.h: In instantiation of 'size_t ArrayInterface::transpose_index(T*, SEXP, bool) [with T = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]':
matter.h:116:20: required from 'size_t MatterArray::get_elements(SEXP, T*, int) [with T = unsigned char; size_t = long long unsigned int; SEXP = SEXPREC*]'
matter.h:209:18: required from here
matterDefines.h:320:47: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
320 | for ( size_t j = 0; j < XLENGTH(indx); j++ )
| ~~^~~~~~~~~~~~~~~
search.h: In instantiation of 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = int; Tval = int; index_t = long long int; size_t = long long unsigned int]':
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = int; Tval = int; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:289:31: required from here
search.h:225:53: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
225 | for ( index_t i = pos[j]; i < xlen; i++ )
| ~~^~~~~~
search.h: In instantiation of 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = double; Tval = int; index_t = long long int; size_t = long long unsigned int]':
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = double; Tval = int; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:293:34: required from here
search.h:225:53: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
search.h: In instantiation of 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = SEXPREC*; Tval = int; index_t = long long int; size_t = long long unsigned int]':
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = SEXPREC*; Tval = int; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:297:32: required from here
search.h:225:53: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
search.h: In instantiation of 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = int; Tval = double; index_t = long long int; size_t = long long unsigned int]':
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = int; Tval = double; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:307:34: required from here
search.h:225:53: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
search.h: In instantiation of 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = double; Tval = double; index_t = long long int; size_t = long long unsigned int]':
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = double; Tval = double; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:311:37: required from here
search.h:225:53: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
search.h: In instantiation of 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = SEXPREC*; Tval = double; index_t = long long int; size_t = long long unsigned int]':
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = SEXPREC*; Tval = double; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:315:35: required from here
search.h:225:53: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
sparse.h: In instantiation of 'size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long long unsigned int; index_t = long long int]':
sparse.h:402:43: required from 'size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long long unsigned int; index_t = long long int]'
sparse.h:433:27: required from here
sparse.h:336:48: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
336 | if ( i < 0 || i + size > sparse_extent() )
| ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h:362:59: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
362 | if ( ii < 0 || ii >= size )
| ~~~^~~~~~~
sparse.h: In instantiation of 'size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long long unsigned int; index_t = long long int]':
sparse.h:402:43: required from 'size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long long unsigned int; index_t = long long int]'
sparse.h:436:30: required from here
sparse.h:336:48: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
336 | if ( i < 0 || i + size > sparse_extent() )
| ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h:362:59: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
362 | if ( ii < 0 || ii >= size )
| ~~~^~~~~~~
sparse.h: In instantiation of 'size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long long unsigned int; index_t = long long int]':
sparse.h:402:43: required from 'size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long long unsigned int; index_t = long long int]'
sparse.h:446:30: required from here
sparse.h:336:48: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
336 | if ( i < 0 || i + size > sparse_extent() )
| ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h:362:59: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
362 | if ( ii < 0 || ii >= size )
| ~~~^~~~~~~
sparse.h: In instantiation of 'size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = double; size_t = long long unsigned int; index_t = long long int]':
sparse.h:402:43: required from 'size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = double; size_t = long long unsigned int; index_t = long long int]'
sparse.h:449:33: required from here
sparse.h:336:48: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
336 | if ( i < 0 || i + size > sparse_extent() )
| ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h:362:59: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
362 | if ( ii < 0 || ii >= size )
| ~~~^~~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:318:30: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:69:22: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:320:39: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:69:22: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:322:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:69:22: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:324:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:69:22: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:326:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:69:22: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:328:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:69:22: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:330:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:69:22: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long unsigned int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:332:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:69:22: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:334:31: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:69:22: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:336:32: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:69:22: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:318:30: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:73:20: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:320:39: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:73:20: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:322:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:73:20: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:324:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:73:20: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:326:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:73:20: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:328:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:73:20: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:330:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:73:20: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long unsigned int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:332:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:73:20: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:334:31: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:73:20: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:336:32: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:73:20: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:318:30: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:77:23: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:320:39: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:77:23: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:322:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:77:23: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:324:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:77:23: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:326:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:77:23: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:328:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:77:23: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:330:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:77:23: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long unsigned int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:332:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:77:23: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:334:31: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:77:23: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:336:32: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:77:23: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:347:31: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:98:22: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:349:40: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:98:22: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:351:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:98:22: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:353:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:98:22: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:355:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:98:22: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:357:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:98:22: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long long int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:359:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:98:22: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long long unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:361:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:98:22: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = float; size_t = long long unsigned int; index_t = long long int]':
atoms.h:363:32: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:98:22: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:365:33: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:98:22: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:347:31: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:101:20: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:349:40: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:101:20: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = short int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:351:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:101:20: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = short unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:353:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:101:20: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:355:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:101:20: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:357:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:101:20: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = long long int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:359:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:101:20: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = long long unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:361:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:101:20: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = float; size_t = long long unsigned int; index_t = long long int]':
atoms.h:363:32: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:101:20: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:365:33: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:101:20: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:347:31: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:104:23: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:349:40: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:104:23: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = short int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:351:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:104:23: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = short unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:353:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:104:23: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:355:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:104:23: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:357:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:104:23: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = long long int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:359:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:104:23: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = long long unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:361:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:104:23: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = float; size_t = long long unsigned int; index_t = long long int]':
atoms.h:363:32: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:104:23: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:365:33: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long long unsigned int; index_t = long long int]'
matterExports.cpp:104:23: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:318:30: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:320:39: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:322:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:324:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:326:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:328:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:330:33: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long long unsigned int; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:332:34: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:334:31: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:336:32: required from 'size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:383:20: required from 'size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long long unsigned int; index_t = long long int]'
matter.h:493:30: required from here
atoms.h:279:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
279 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:288:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
288 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:347:31: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = unsigned char; size_t = long long unsigned int; index_t = long long int]':
atoms.h:349:40: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = short int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:351:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = short unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:353:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:355:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:357:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = long long int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:359:34: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = long long unsigned int; size_t = long long unsigned int; index_t = long long int]':
atoms.h:361:35: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = float; size_t = long long unsigned int; index_t = long long int]':
atoms.h:363:32: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
atoms.h: In instantiation of 'size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = double; size_t = long long unsigned int; index_t = long long int]':
atoms.h:365:33: required from 'size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
atoms.h:405:20: required from 'size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long long unsigned int; index_t = long long int]'
matter.h:536:36: required from here
atoms.h:298:41: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
298 | if ( pos + size >= extent(atom) )
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h:301:48: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
301 | for ( index_t i = 0; i < size; i++ )
| ~~^~~~~~
signal.h: In instantiation of 'Ty interp1(Tx, Tx*, Ty*, size_t, size_t, double, int, int, bool) [with Tx = int; Ty = int; size_t = long long unsigned int]':
search.h:229:30: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = int; Tval = int; index_t = long long int; size_t = long long unsigned int]'
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = int; Tval = int; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:289:31: required from here
signal.h:97:43: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
97 | for ( index_t i = init; i < end && i >= 0; i += k )
| ~~^~~~~
signal.h: In instantiation of 'Ty interp1(Tx, Tx*, Ty*, size_t, size_t, double, int, int, bool) [with Tx = double; Ty = int; size_t = long long unsigned int]':
search.h:229:30: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = double; Tval = int; index_t = long long int; size_t = long long unsigned int]'
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = double; Tval = int; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:293:34: required from here
signal.h:97:43: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
signal.h: In instantiation of 'Ty interp1(Tx, Tx*, Ty*, size_t, size_t, double, int, int, bool) [with Tx = SEXPREC*; Ty = int; size_t = long long unsigned int]':
search.h:229:30: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = SEXPREC*; Tval = int; index_t = long long int; size_t = long long unsigned int]'
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = SEXPREC*; Tval = int; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:297:32: required from here
signal.h:97:43: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
signal.h: In instantiation of 'Ty interp1(Tx, Tx*, Ty*, size_t, size_t, double, int, int, bool) [with Tx = int; Ty = double; size_t = long long unsigned int]':
search.h:229:30: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = int; Tval = double; index_t = long long int; size_t = long long unsigned int]'
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = int; Tval = double; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:307:34: required from here
signal.h:97:43: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
signal.h: In instantiation of 'Ty interp1(Tx, Tx*, Ty*, size_t, size_t, double, int, int, bool) [with Tx = double; Ty = double; size_t = long long unsigned int]':
search.h:229:30: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = double; Tval = double; index_t = long long int; size_t = long long unsigned int]'
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = double; Tval = double; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:311:37: required from here
signal.h:97:43: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
signal.h: In instantiation of 'Ty interp1(Tx, Tx*, Ty*, size_t, size_t, double, int, int, bool) [with Tx = SEXPREC*; Ty = double; size_t = long long unsigned int]':
search.h:229:30: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, Tkey*, Tval*, size_t, size_t, double, int, Tval, int, bool, int) [with Tkey = SEXPREC*; Tval = double; index_t = long long int; size_t = long long unsigned int]'
search.h:275:25: required from 'index_t do_approx_search(Tval*, Tkey*, size_t, SEXP, SEXP, double, int, Tval, int, bool, int) [with Tkey = SEXPREC*; Tval = double; index_t = long long int; size_t = long long unsigned int; SEXP = SEXPREC*]'
search.h:315:35: required from here
signal.h:97:43: warning: comparison of integer expressions of different signedness: 'index_t' {aka 'long long int'} and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
sparse.h: In instantiation of 'void SparseArray::copy_domain(index_t, size_t, T*) [with T = int; index_t = long long int; size_t = long long unsigned int]':
sparse.h:349:22: required from 'size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long long unsigned int; index_t = long long int]'
sparse.h:402:43: required from 'size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long long unsigned int; index_t = long long int]'
sparse.h:433:27: required from here
sparse.h:190:48: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
190 | if ( i < 0 || i + size > sparse_extent() )
| ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h: In instantiation of 'void SparseArray::copy_domain(index_t, size_t, T*) [with T = double; index_t = long long int; size_t = long long unsigned int]':
sparse.h:349:22: required from 'size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long long unsigned int; index_t = long long int]'
sparse.h:402:43: required from 'size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long long unsigned int; index_t = long long int]'
sparse.h:436:30: required from here
sparse.h:190:48: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'index_t' {aka 'long long int'} [-Wsign-compare]
search.h: In function 'index_t binary_search(T, T*, size_t, size_t, double, int, int, bool, bool, int) [with T = int]':
search.h:104:41: warning: 'delta' may be used uninitialized [-Wmaybe-uninitialized]
104 | else if ( (mid == right && delta > 0) && (nearest || dright <= tol) )
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~
search.h:78:16: note: 'delta' was declared here
78 | double delta;
| ^~~~~
search.h: In function 'index_t binary_search(T, T*, size_t, size_t, double, int, int, bool, bool, int) [with T = double]':
search.h:104:41: warning: 'delta' may be used uninitialized [-Wmaybe-uninitialized]
104 | else if ( (mid == right && delta > 0) && (nearest || dright <= tol) )
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~
search.h:78:16: note: 'delta' was declared here
78 | double delta;
| ^~~~~
search.h: In function 'index_t binary_search(T, T*, size_t, size_t, double, int, int, bool, bool, int) [with T = SEXPREC*]':
search.h:104:41: warning: 'delta' may be used uninitialized [-Wmaybe-uninitialized]
104 | else if ( (mid == right && delta > 0) && (nearest || dright <= tol) )
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~
search.h:78:16: note: 'delta' was declared here
78 | double delta;
| ^~~~~
g++ -std=gnu++17 -shared -s -static-libgcc -o matter.dll tmp.def altrep.o init.o matterExports.o -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.17-bioc/R/library/00LOCK-matter/00new/matter/libs/x64
** R
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'apply' in package 'matter'
Creating a new generic function for 'scale' in package 'matter'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (matter)
matter.Rcheck/tests/testthat.Rout
R version 4.3.1 (2023-06-16 ucrt) -- "Beagle Scouts"
Copyright (C) 2023 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(matter)
Loading required package: BiocParallel
Loading required package: Matrix
Attaching package: 'matter'
The following objects are masked from 'package:base':
apply, scale
>
> test_check("matter")
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 725 ]
>
> proc.time()
user system elapsed
10.65 1.21 13.37
matter.Rcheck/matter-Ex.timings
| name | user | system | elapsed | |
| asearch | 0 | 0 | 0 | |
| biglm | 0.07 | 0.02 | 0.08 | |
| binvec | 0 | 0 | 0 | |
| bsearch | 0 | 0 | 0 | |
| checksum | 0.03 | 0.03 | 0.06 | |
| chunkApply | 0.66 | 0.03 | 0.69 | |
| colscale | 0.12 | 0.00 | 0.12 | |
| colsweep | 0.02 | 0.00 | 0.02 | |
| deferred-ops | 0.05 | 0.00 | 0.04 | |
| drle-class | 0 | 0 | 0 | |
| findpeaks | 0 | 0 | 0 | |
| matter-class | 0.03 | 0.00 | 0.03 | |
| matter_arr-class | 0.04 | 0.02 | 0.05 | |
| matter_fct-class | 0.00 | 0.01 | 0.01 | |
| matter_list-class | 0.03 | 0.00 | 0.03 | |
| matter_str-class | 0.00 | 0.00 | 0.02 | |
| prcomp | 0.09 | 0.00 | 0.09 | |
| profmem | 0.42 | 0.00 | 0.43 | |
| rowStats | 0.12 | 0.00 | 0.13 | |
| sparse_arr-class | 0.02 | 0.00 | 0.01 | |
| stream-stats | 0.01 | 0.00 | 0.02 | |
| struct | 0.02 | 0.00 | 0.01 | |
| summary-stats | 0.22 | 0.00 | 0.22 | |
| uuid | 0 | 0 | 0 | |