############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data imageHTS ### ############################################################################## ############################################################################## * checking for file ‘imageHTS/DESCRIPTION’ ... OK * preparing ‘imageHTS’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘imageHTS-introduction.Rnw’ using Sweave Loading required package: EBImage Attaching package: ‘EBImage’ The following object is masked _by_ ‘.GlobalEnv’: display Loading required package: cellHTS2 Loading required package: RColorBrewer Loading required package: Biobase Loading required package: BiocGenerics Attaching package: ‘BiocGenerics’ The following objects are masked from ‘package:stats’: IQR, mad, sd, var, xtabs The following objects are masked from ‘package:base’: Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append, as.data.frame, basename, cbind, colnames, dirname, do.call, duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted, lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table, tapply, union, unique, unsplit, which.max, which.min Welcome to Bioconductor Vignettes contain introductory material; view with 'browseVignettes()'. To cite Bioconductor, see 'citation("Biobase")', and for packages 'citation("pkgname")'. Attaching package: ‘Biobase’ The following object is masked from ‘package:EBImage’: channel Loading required package: genefilter Loading required package: splots Loading required package: vsn Loading required package: hwriter Loading required package: locfit locfit 1.5-9.8 2023-06-11 Loading required package: grid Error: processing vignette 'imageHTS-introduction.Rnw' failed with diagnostics: chunk 8 (label = segmentWells1) Error in nx < 1 || lwd < 0 : 'length = 2' in coercion to 'logical(1)' --- failed re-building ‘imageHTS-introduction.Rnw’ SUMMARY: processing the following file failed: ‘imageHTS-introduction.Rnw’ Error: Vignette re-building failed. Execution halted