############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf gpuMagic.buildbin-libdir && mkdir gpuMagic.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=gpuMagic.buildbin-libdir gpuMagic_1.16.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'gpuMagic' ... ** using staged installation ** libs using C++ compiler: 'G__~1.EXE (GCC) 12.2.0' using C++11 g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -IF:/biocbuild/bbs-3.17-bioc/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C_Interface.cpp -o C_Interface.o C_Interface.cpp: In function 'SEXPREC* download(SEXP)': C_Interface.cpp:142:19: warning: 'res' may be used uninitialized [-Wmaybe-uninitialized] 142 | return(res); | ^ C_Interface.cpp:112:14: note: 'res' was declared here 112 | SEXP res; | ^~~ g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -IF:/biocbuild/bbs-3.17-bioc/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c R_functionRegistration.cpp -o R_functionRegistration.o g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -IF:/biocbuild/bbs-3.17-bioc/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c Tools.cpp -o Tools.o g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -IF:/biocbuild/bbs-3.17-bioc/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c kernelManager.cpp -o kernelManager.o g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -IF:/biocbuild/bbs-3.17-bioc/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c openArray.cpp -o openArray.o g++ -shared -s -static-libgcc -o gpuMagic.dll tmp.def C_Interface.o R_functionRegistration.o Tools.o kernelManager.o openArray.o C:/Windows/system32/OpenCL.dll -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR installing to F:/biocbuild/bbs-3.17-bioc/meat/gpuMagic.buildbin-libdir/00LOCK-gpuMagic/00new/gpuMagic/libs/x64 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location No device has been found, please make sure the computer has a graphic card or the driver has been properly installed. Hint: For CPU, you can install the intel's / ATI's graphic driver for the intel's / AMD's CPU respectively. For GPU, you need to download the graphic driver from your vendor's website. ** testing if installed package can be loaded from final location No device has been found, please make sure the computer has a graphic card or the driver has been properly installed. Hint: For CPU, you can install the intel's / ATI's graphic driver for the intel's / AMD's CPU respectively. For GPU, you need to download the graphic driver from your vendor's website. ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'gpuMagic' as gpuMagic_1.16.0.zip * DONE (gpuMagic)