Gro Nilsen
| Snapshot Date: 2023-04-03 14:00:24 -0400 (Mon, 03 Apr 2023) |
| git_url: https://git.bioconductor.org/packages/copynumber |
| git_branch: devel |
| git_last_commit: 63a78b1 |
| git_last_commit_date: 2023-03-06 11:52:54 -0400 (Mon, 06 Mar 2023) |
| Back to Multiple platform build/check report for BioC 3.17: simplified long |
|
This page was generated on 2023-04-04 11:06:37 -0400 (Tue, 04 Apr 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.1 LTS) | x86_64 | R Under development (unstable) (2023-03-16 r83996) -- "Unsuffered Consequences" | 4554 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2023-03-15 r83984 ucrt) -- "Unsuffered Consequences" | 4314 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2023-03-16 r83985) -- "Unsuffered Consequences" | 4311 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the copynumber package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/copynumber.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details. |
| Package 422/2200 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Gro Nilsen
| nebbiolo1 | Linux (Ubuntu 22.04.1 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: copynumber |
| Version: 1.39.1 |
| Command: rm -rf copynumber.buildbin-libdir && mkdir copynumber.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh copynumber_1.39.1.tar.gz /Library/Frameworks/R.framework/Resources/bin/R copynumber.buildbin-libdir |
| StartedAt: 2023-04-04 09:06:29 -0400 (Tue, 04 Apr 2023) |
| EndedAt: 2023-04-04 09:07:18 -0400 (Tue, 04 Apr 2023) |
| EllapsedTime: 48.5 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: copynumber_1.39.1.tgz |
| PackageFileSize: 1.851 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf copynumber.buildbin-libdir && mkdir copynumber.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh copynumber_1.39.1.tar.gz /Library/Frameworks/R.framework/Resources/bin/R copynumber.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=copynumber.buildbin-libdir copynumber_1.39.1.tar.gz' >>>>>>> * installing *source* package ‘copynumber’ ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: Package 'copynumber' is deprecated and will be removed from Bioconductor version 3.18 ** testing if installed package can be loaded from final location Warning: Package 'copynumber' is deprecated and will be removed from Bioconductor version 3.18 ** testing if installed package keeps a record of temporary installation path * DONE (copynumber)