Back to Multiple platform build/check report for BioC 3.17:   simplified   long
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This page was generated on 2023-10-16 11:35:02 -0400 (Mon, 16 Oct 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.2 LTS)x86_644.3.1 (2023-06-16) -- "Beagle Scouts" 4626
palomino3Windows Server 2022 Datacenterx644.3.1 (2023-06-16 ucrt) -- "Beagle Scouts" 4379
merida1macOS 12.6.4 Montereyx86_644.3.1 (2023-06-16) -- "Beagle Scouts" 4395
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

All results for package ShortRead


To the developers/maintainers of the ShortRead package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ShortRead.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Package 1906/2230HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ShortRead 1.58.0  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2023-10-15 14:00:13 -0400 (Sun, 15 Oct 2023)
git_url: https://git.bioconductor.org/packages/ShortRead
git_branch: RELEASE_3_17
git_last_commit: 433d182
git_last_commit_date: 2023-04-25 09:46:47 -0400 (Tue, 25 Apr 2023)
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here

Results for Bioconductor software packages that depend directly on package ShortRead

QUICK STATSOS / ArchINSTALLBUILDCHECKBUILD BIN
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64
0128
0128
01423
palomino3Windows Server 2022 Datacenter / x64
0027
0027
01323
0027
merida1macOS 12.6.4 Monterey / x86_64
0127
0127
00423
0027
Package 1/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
amplican 1.22.1  (landing page)
Eivind Valen
git_last_commit: 1813c32
git_last_commit_date: 2023-05-05 14:00:14 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 2/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ArrayExpressHTS 1.50.0  (landing page)
Angela Goncalves , Andrew Tikhonov
git_last_commit: 7b79d4b
git_last_commit_date: 2023-04-25 10:19:47 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  ERROR    ERROR  skipped
palomino3Windows Server 2022 Datacenter / x64... NOT SUPPORTED ...
merida1macOS 12.6.4 Monterey / x86_64  ERROR    ERROR  skippedskipped
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 3/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
basecallQC 1.24.0  (landing page)
Thomas Carroll
git_last_commit: 7598a88
git_last_commit_date: 2023-04-25 10:53:38 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 4/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BEAT 1.38.0  (landing page)
Kemal Akman
git_last_commit: c346273
git_last_commit_date: 2023-04-25 10:30:03 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 5/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CellBarcode 1.6.0  (landing page)
Wenjie Sun
git_last_commit: 53dc39e
git_last_commit_date: 2023-04-25 11:34:35 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 6/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
chipseq 1.50.0  (landing page)
Bioconductor Package Maintainer
git_last_commit: 0bdfa25
git_last_commit_date: 2023-04-25 09:48:54 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 7/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPseqR 1.54.0  (landing page)
Peter Humburg
git_last_commit: 2a7eaf4
git_last_commit_date: 2023-04-25 09:49:43 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 8/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPsim 1.54.0  (landing page)
Peter Humburg
git_last_commit: 26c7230
git_last_commit_date: 2023-04-25 09:49:17 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 9/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CircSeqAlignTk 1.2.0  (landing page)
Jianqiang Sun
git_last_commit: f1b4cef
git_last_commit_date: 2023-04-25 11:40:31 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    ERROR    OK  
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 10/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
dada2 1.28.0  (landing page)
Benjamin Callahan
git_last_commit: 91f0208
git_last_commit_date: 2023-04-25 10:44:36 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 11/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
easyRNASeq 2.36.0  (landing page)
Nicolas Delhomme
git_last_commit: e5e1842
git_last_commit_date: 2023-04-25 10:22:04 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 12/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EDASeq 2.34.0  (landing page)
Davide Risso
git_last_commit: 71b52e3
git_last_commit_date: 2023-04-25 10:20:57 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 13/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
esATAC 1.22.0  (landing page)
Zheng Wei
git_last_commit: 02846bd
git_last_commit_date: 2023-04-25 10:58:10 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 14/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FastqCleaner 1.18.0  (landing page)
Leandro Roser
git_last_commit: 67ede57
git_last_commit_date: 2023-04-25 11:02:17 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 15/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
girafe 1.52.0  (landing page)
J. Toedling
git_last_commit: d07f687
git_last_commit_date: 2023-04-25 09:50:34 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 16/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GOTHiC 1.36.0  (landing page)
Borbala Mifsud
git_last_commit: ade51bc
git_last_commit_date: 2023-04-25 11:11:06 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 17/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
HTSeqGenie 4.30.0  (landing page)
Jens Reeder
git_last_commit: 27e3630
git_last_commit_date: 2023-04-25 10:24:28 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    ERROR  
palomino3Windows Server 2022 Datacenter / x64... NOT SUPPORTED ...
merida1macOS 12.6.4 Monterey / x86_64... NOT SUPPORTED ...
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 18/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
icetea 1.18.1  (landing page)
Vivek Bhardwaj
git_last_commit: 234416f
git_last_commit_date: 2023-06-27 10:02:59 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 19/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
IONiseR 2.24.0  (landing page)
Mike Smith
git_last_commit: 4ef2d40
git_last_commit_date: 2023-04-25 10:40:11 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 20/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
nucleR 2.32.0  (landing page)
Alba Sala
git_last_commit: fbbd6e9
git_last_commit_date: 2023-04-25 10:20:23 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 21/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OTUbase 1.50.0  (landing page)
Daniel Beck
git_last_commit: 37f3f24
git_last_commit_date: 2023-04-25 10:18:00 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 22/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
QuasR 1.40.1  (landing page)
Michael Stadler
git_last_commit: ededf94
git_last_commit_date: 2023-06-14 02:04:10 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 23/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
R453Plus1Toolbox 1.50.0  (landing page)
Hans-Ulrich Klein
git_last_commit: 4064694
git_last_commit_date: 2023-04-25 10:18:15 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 24/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Rqc 1.34.0  (landing page)
Welliton Souza
git_last_commit: 3339609
git_last_commit_date: 2023-04-25 10:36:13 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 25/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RSVSim 1.40.0  (landing page)
Christoph Bartenhagen
git_last_commit: b350e89
git_last_commit_date: 2023-04-25 10:25:08 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 26/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scruff 1.18.0  (landing page)
Zhe Wang
git_last_commit: fa92a2c
git_last_commit_date: 2023-04-25 11:03:10 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 27/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
segmentSeq 2.34.0  (landing page)
Thomas J. Hardcastle
git_last_commit: 1196b04
git_last_commit_date: 2023-04-25 09:50:22 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  NO, package depends on 'baySeq' which is not available
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'baySeq' which is not available
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  NO, package depends on 'baySeq' which is not available
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 28/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
systemPipeR 2.6.3  (landing page)
Thomas Girke
git_last_commit: 666420d
git_last_commit_date: 2023-06-20 21:08:31 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here
Package 29/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
UMI4Cats 1.10.0  (landing page)
Mireia Ramos-Rodriguez
git_last_commit: a1a1947
git_last_commit_date: 2023-04-25 11:21:41 -0400
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here