############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf Rhdf5lib.buildbin-libdir && mkdir Rhdf5lib.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=Rhdf5lib.buildbin-libdir Rhdf5lib_1.22.1.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'Rhdf5lib' ... ** using staged installation untarring hdf5_headers_1.10.7.tar.gz ... ** libs Warning: this package has a non-empty 'configure.ucrt' file, so building only the main architecture using C compiler: 'gcc.exe (GCC) 12.2.0' mkdir -p "F:/biocbuild/bbs-3.17-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/x64-ucrt" "F:/biocbuild/bbs-3.17-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/include" "F:/biocbuild/bbs-3.17-bioc/R/bin/x64/Rscript.exe" "../tools/copy_hdf5_files.R" "F:/biocbuild/bbs-3.17-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/x64-ucrt" "F:/biocbuild/bbs-3.17-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/include" Copying libraries Copying headers Done "F:/biocbuild/bbs-3.17-bioc/R/bin/x64/Rscript.exe" "../tools/winlibs.R" "F:/biocbuild/bbs-3.17-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/x64-ucrt" Copying libcurl etc gcc -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include" -I"F:/biocbuild/bbs-3.17-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c Rhdf5lib.c -o Rhdf5lib.o gcc -shared -s -static-libgcc -o Rhdf5lib.dll tmp.def Rhdf5lib.o F:/biocbuild/bbs-3.17-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/x64-ucrt/libhdf5.a F:/biocbuild/bbs-3.17-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/x64-ucrt/libsz.a F:/biocbuild/bbs-3.17-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/x64-ucrt/libaec.a -lpsapi -lz -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR installing to F:/biocbuild/bbs-3.17-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/libs/x64 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'Rhdf5lib' as Rhdf5lib_1.22.1.zip * DONE (Rhdf5lib)