############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL LowMACA ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/site-library’ * installing *source* package ‘LowMACA’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Checking if clustalo is in the PATH... Checking clustalo Version... Checking perl installation... Checking perl modules XML::Simple and LWP... Can't locate XML/Simple.pm in @INC (you may need to install the XML::Simple module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.34.0 /usr/local/share/perl/5.34.0 /usr/lib/x86_64-linux-gnu/perl5/5.34 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl-base /usr/lib/x86_64-linux-gnu/perl/5.34 /usr/share/perl/5.34 /usr/local/lib/site_perl). BEGIN failed--compilation aborted. Warning in system(paste(perl, "-MXML::Simple -e 1"), intern = TRUE) : running command '/usr/bin/perl -MXML::Simple -e 1' had status 2 Warning in .PerlModuleChecks(stop = FALSE, perl = "perl") : XML::Simple module for perl is not installed. If you don't want to install a local clustal omega and use the web service, XML::Simple is required ** testing if installed package can be loaded from final location Checking if clustalo is in the PATH... Checking clustalo Version... Checking perl installation... Checking perl modules XML::Simple and LWP... Can't locate XML/Simple.pm in @INC (you may need to install the XML::Simple module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.34.0 /usr/local/share/perl/5.34.0 /usr/lib/x86_64-linux-gnu/perl5/5.34 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl-base /usr/lib/x86_64-linux-gnu/perl/5.34 /usr/share/perl/5.34 /usr/local/lib/site_perl). BEGIN failed--compilation aborted. Warning in system(paste(perl, "-MXML::Simple -e 1"), intern = TRUE) : running command '/usr/bin/perl -MXML::Simple -e 1' had status 2 Warning in .PerlModuleChecks(stop = FALSE, perl = "perl") : XML::Simple module for perl is not installed. If you don't want to install a local clustal omega and use the web service, XML::Simple is required ** testing if installed package keeps a record of temporary installation path * DONE (LowMACA)