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### Running command:
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###   chmod a+r GAPGOM -R && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data GAPGOM
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* checking for file 'GAPGOM/DESCRIPTION' ... OK
* preparing 'GAPGOM':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'GAPGOM.Rmd' using rmarkdown

Quitting from lines 130-142 [expset] (GAPGOM.Rmd)
Error: processing vignette 'GAPGOM.Rmd' failed with diagnostics:
could not find function "ExpressionSet"
--- failed re-building 'GAPGOM.Rmd'

--- re-building 'benchmarks.Rmd' using rmarkdown
--- finished re-building 'benchmarks.Rmd'

SUMMARY: processing the following file failed:
  'GAPGOM.Rmd'

Error: Vignette re-building failed.
Execution halted