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This page was generated on 2023-10-16 11:36:04 -0400 (Mon, 16 Oct 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.2 LTS)x86_644.3.1 (2023-06-16) -- "Beagle Scouts" 4626
palomino3Windows Server 2022 Datacenterx644.3.1 (2023-06-16 ucrt) -- "Beagle Scouts" 4379
merida1macOS 12.6.4 Montereyx86_644.3.1 (2023-06-16) -- "Beagle Scouts" 4395
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 524/2230HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DelayedTensor 1.6.0  (landing page)
Koki Tsuyuzaki
Snapshot Date: 2023-10-15 14:00:13 -0400 (Sun, 15 Oct 2023)
git_url: https://git.bioconductor.org/packages/DelayedTensor
git_branch: RELEASE_3_17
git_last_commit: a717175
git_last_commit_date: 2023-04-25 11:30:44 -0400 (Tue, 25 Apr 2023)
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here

CHECK results for DelayedTensor on palomino3


To the developers/maintainers of the DelayedTensor package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DelayedTensor.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: DelayedTensor
Version: 1.6.0
Command: F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:DelayedTensor.install-out.txt --library=F:\biocbuild\bbs-3.17-bioc\R\library --no-vignettes --timings DelayedTensor_1.6.0.tar.gz
StartedAt: 2023-10-16 01:22:09 -0400 (Mon, 16 Oct 2023)
EndedAt: 2023-10-16 01:31:01 -0400 (Mon, 16 Oct 2023)
EllapsedTime: 531.6 seconds
RetCode: 0
Status:   WARNINGS  
CheckDir: DelayedTensor.Rcheck
Warnings: 1

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:DelayedTensor.install-out.txt --library=F:\biocbuild\bbs-3.17-bioc\R\library --no-vignettes --timings DelayedTensor_1.6.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory 'F:/biocbuild/bbs-3.17-bioc/meat/DelayedTensor.Rcheck'
* using R version 4.3.1 (2023-06-16 ucrt)
* using platform: x86_64-w64-mingw32 (64-bit)
* R was compiled by
    gcc.exe (GCC) 12.2.0
    GNU Fortran (GCC) 12.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'DelayedTensor/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'DelayedTensor' version '1.6.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'DelayedTensor' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
.block_khatri_rao_IDX2: no visible global function definition for
  'Lindex2Mindex'
.block_khatri_rao_IDX2: no visible global function definition for
  'Mindex2Lindex'
.block_kroneckerIDX: no visible global function definition for
  'Lindex2Mindex'
.block_kroneckerIDX: no visible global function definition for
  'Mindex2Lindex'
.block_reshape: no visible global function definition for
  'Lindex2Mindex'
.block_vec: no visible global function definition for 'Mindex2Lindex'
.read_block_einsum: no visible global function definition for
  'Mindex2Lindex'
.tickMarksScheduling2: no visible global function definition for
  'Mindex2Lindex'
.write_block_einsum: no visible global function definition for
  'Mindex2Lindex'
einsum: no visible global function definition for 'Lindex2Mindex'
Undefined global functions or variables:
  Lindex2Mindex Mindex2Lindex
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
                      old_size new_size compress
  human_mid_brain.rda    677Kb    442Kb       xz
  mouse_mid_brain.rda    761Kb    511Kb       xz
* checking files in 'vignettes' ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
cp     127.26  31.53  268.41
tucker  20.07   5.02   43.15
mpca     9.27   2.35   19.07
pvd      5.64   1.17   10.42
hosvd    2.96   0.72    6.17
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
  Running 'testthat.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 1 NOTE
See
  'F:/biocbuild/bbs-3.17-bioc/meat/DelayedTensor.Rcheck/00check.log'
for details.



Installation output

DelayedTensor.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL DelayedTensor
###
##############################################################################
##############################################################################


* installing to library 'F:/biocbuild/bbs-3.17-bioc/R/library'
* installing *source* package 'DelayedTensor' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'kronecker' in package 'DelayedTensor'
Creating a new generic function for 'diag' in package 'DelayedTensor'
Creating a new generic function for 'diag<-' in package 'DelayedTensor'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (DelayedTensor)

Tests output

DelayedTensor.Rcheck/tests/testthat.Rout


R version 4.3.1 (2023-06-16 ucrt) -- "Beagle Scouts"
Copyright (C) 2023 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library("DelayedArray")
Loading required package: stats4
Loading required package: Matrix
Loading required package: BiocGenerics

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
    pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
    tapply, union, unique, unsplit, which.max, which.min

Loading required package: MatrixGenerics
Loading required package: matrixStats

Attaching package: 'MatrixGenerics'

The following objects are masked from 'package:matrixStats':

    colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse,
    colCounts, colCummaxs, colCummins, colCumprods, colCumsums,
    colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs,
    colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats,
    colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds,
    colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads,
    colWeightedMeans, colWeightedMedians, colWeightedSds,
    colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet,
    rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods,
    rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps,
    rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins,
    rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks,
    rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars,
    rowWeightedMads, rowWeightedMeans, rowWeightedMedians,
    rowWeightedSds, rowWeightedVars

Loading required package: S4Vectors

Attaching package: 'S4Vectors'

The following objects are masked from 'package:Matrix':

    expand, unname

The following object is masked from 'package:utils':

    findMatches

The following objects are masked from 'package:base':

    I, expand.grid, unname

Loading required package: IRanges

Attaching package: 'IRanges'

The following object is masked from 'package:grDevices':

    windows

Loading required package: S4Arrays
Loading required package: abind

Attaching package: 'S4Arrays'

The following object is masked from 'package:abind':

    abind

The following object is masked from 'package:base':

    rowsum


Attaching package: 'DelayedArray'

The following objects are masked from 'package:base':

    apply, scale, sweep

> # library("HDF5Array") # comment out
> # library("BiocSingular") # comment out
> library("rTensor")

Attaching package: 'rTensor'

The following object is masked from 'package:S4Vectors':

    fold

> library("DelayedRandomArray")
> # library("irlba") # comment out
> # library("Matrix") # comment out
> library("einsum")
> library("DelayedTensor")

Attaching package: 'DelayedTensor'

The following object is masked from 'package:einsum':

    einsum

The following objects are masked from 'package:rTensor':

    cp, cs_fold, cs_unfold, fnorm, fold, hadamard_list, hosvd,
    innerProd, k_fold, k_unfold, khatri_rao, khatri_rao_list,
    kronecker_list, matvec, modeMean, modeSum, mpca, pvd, rs_fold,
    rs_unfold, ttl, ttm, tucker, unfold, unmatvec, vec

The following object is masked from 'package:S4Vectors':

    fold

The following objects are masked from 'package:Matrix':

    diag, diag<-, kronecker

The following object is masked from 'package:methods':

    kronecker

The following objects are masked from 'package:base':

    diag, diag<-, kronecker

> library("reticulate")
> library("testthat")
> library("HDF5Array")
Loading required package: rhdf5

Attaching package: 'HDF5Array'

The following object is masked from 'package:rhdf5':

    h5ls

> 
> # Setting
> options(testthat.use_colours = FALSE)
> options(delayedtensor.sparse = FALSE)
> options(delayedtensor.verbose = FALSE)
> setHDF5DumpCompressionLevel(level=9L)
> source("testthat/test_Einsum_objects.R")
> 
> # source("../R/Decomp.R") # comment out
> # source("../R/Einsum.R") # comment out
> # source("../R/Generics.R") # comment out
> # source("../R/Global-settings.R") # comment out
> # source("../R/Misc.R") # comment out
> # source("../R/SVD.R") # comment out
> # source("../R/Utils.R") # comment out
> # source("../R/zzz.R") # comment out
> 
> # for(size in c(1E+9,1E+8,1E+7,1E+6,1E+5,1E+4,1E+3,1E+2,50,20:1)){ # comment out
> # setAutoBlockSize(size=size) # comment out
> # getAutoBlockSize() # comment out
> test_file("testthat/test_Generics.R")

══ Testing test_Generics.R ═════════════════════════════════════════════════════

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 2 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 3 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 4 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 5 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 6 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 6 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 7 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 8 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 9 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 9 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 10 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 10 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 11 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 12 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 13 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 13 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 14 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 15 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 16 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 16 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 17 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 18 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 19 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 20 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 21 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 22 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 22 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 23 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 25 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 26 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 27 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 28 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 28 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 29 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 29 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 30 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 30 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 31 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 31 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 32 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 32 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 33 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 33 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 34 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 34 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 35 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 35 ]
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 35 ]

── Error ('test_Generics.R:168:1'): (code run outside of `test_that()`) ────────
Error in `all.equal.numeric(x, y, tolerance = tolerance, check.attributes = check.attributes, 
    ...)`: length(tolerance) == 1L is not TRUE
Backtrace:
    ▆
 1. └─testthat::expect_equal(tnsr@data, tnsr2@data, as.array(darr2)) at test_Generics.R:168:0
 2.   ├─testthat::compare(act$val, exp$val, ...)
 3.   └─testthat:::compare.numeric(act$val, exp$val, ...)
 4.     ├─base::all.equal(...)
 5.     └─base::all.equal.numeric(...)
 6.       └─base::stopifnot(length(tolerance) == 1L)

[ FAIL 1 | WARN 0 | SKIP 0 | PASS 35 ]
> test_file("testthat/test_Misc.R")

══ Testing test_Misc.R ═════════════════════════════════════════════════════════

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ]
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 1 ]

── Error ('test_Misc.R:29:1'): (code run outside of `test_that()`) ─────────────
Error in `all.equal.numeric(x, y, tolerance = tolerance, check.attributes = check.attributes, 
    ...)`: length(tolerance) == 1L is not TRUE
Backtrace:
    ▆
 1. └─testthat::expect_equal(...) at test_Misc.R:29:0
 2.   ├─testthat::compare(act$val, exp$val, ...)
 3.   └─testthat:::compare.numeric(act$val, exp$val, ...)
 4.     ├─base::all.equal(...)
 5.     └─base::all.equal.numeric(...)
 6.       └─base::stopifnot(length(tolerance) == 1L)

[ FAIL 1 | WARN 0 | SKIP 0 | PASS 1 ]
> # test_file("testthat/test_SVD.R") # comment out
> test_file("testthat/test_4thorder.R")

══ Testing test_4thorder.R ═════════════════════════════════════════════════════

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ][1] "unfold"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 2 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 3 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 4 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 5 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 6 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 7 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 7 ][1] "modeSum"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 8 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 9 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 10 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 11 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 12 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 13 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 14 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 15 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 15 ][1] "innerProd"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 16 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 16 ][1] "vec"

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 17 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 17 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 18 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 18 ][1] "fold"

[ FAIL 1 | WARN 0 | SKIP 0 | PASS 18 ]

── Error ('test_4thorder.R:91:1'): (code run outside of `test_that()`) ─────────
Error in `all.equal.numeric(x, y, tolerance = tolerance, check.attributes = check.attributes, 
    ...)`: length(tolerance) == 1L is not TRUE
Backtrace:
    ▆
 1. └─testthat::expect_equal(arr4, tnsr4_2@data, as.array(darr4_2)) at test_4thorder.R:91:0
 2.   ├─testthat::compare(act$val, exp$val, ...)
 3.   └─testthat:::compare.numeric(act$val, exp$val, ...)
 4.     ├─base::all.equal(...)
 5.     └─base::all.equal.numeric(...)
 6.       └─base::stopifnot(length(tolerance) == 1L)

[ FAIL 1 | WARN 0 | SKIP 0 | PASS 18 ]
> test_file("testthat/test_Einsum.R")

══ Testing test_Einsum.R ═══════════════════════════════════════════════════════

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ]

── Error ('test_Einsum.R:4:1'): (code run outside of `test_that()`) ────────────
Error in `all.equal.numeric(x, y, tolerance = tolerance, check.attributes = check.attributes, 
    ...)`: length(tolerance) == 1L is not TRUE
Backtrace:
    ▆
 1. └─testthat::expect_equal(...) at test_Einsum.R:4:0
 2.   ├─testthat::compare(act$val, exp$val, ...)
 3.   └─testthat:::compare.numeric(act$val, exp$val, ...)
 4.     ├─base::all.equal(...)
 5.     └─base::all.equal.numeric(...)
 6.       └─base::stopifnot(length(tolerance) == 1L)

[ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ]
> # gc();gc() # comment out
> # } # comment out
> 
> # setAutoBlockSize(size=1E+8)
> # test_file("testthat/test_Decomp.R")
> # test_file("testthat/test_Einsum_Py.R") # comment out
> # source("testthat/test_Verbose.R")
> # source("testthat/test_Sparse.R")
> 
> # Profiling
> # source("testthat/test_SuperBig.R") # comment out
> 
> proc.time()
   user  system elapsed 
  18.17    3.18   30.04 

Example timings

DelayedTensor.Rcheck/DelayedTensor-Ex.timings

nameusersystemelapsed
DelayedDiagonalArray0.080.000.07
DelayedTensor-package000
cbind_list1.110.191.56
cp127.26 31.53268.41
cs_fold0.390.060.66
cs_unfold0.240.060.42
diag0.390.050.58
einsum0.900.171.51
fnorm0.160.000.16
fold0.330.240.81
getSparse000
getVerbose000
hadamard0.220.040.30
hadamard_list0.200.080.32
hosvd2.960.726.17
human_mid_brain0.000.000.02
innerProd0.160.000.16
k_fold0.440.080.86
k_unfold0.250.080.46
khatri_rao0.210.010.29
khatri_rao_list0.210.060.32
kronecker0.080.050.12
kronecker_list0.210.050.31
list_rep0.200.030.23
matvec0.250.050.46
modeMean1.490.292.78
modeSum1.080.191.94
modebind_list0.960.272.05
mouse_mid_brain000
mpca 9.27 2.3519.07
outerProd0.360.070.47
pvd 5.64 1.1710.42
rbind_list0.440.090.76
rs_fold0.480.080.90
rs_unfold0.260.060.45
setSparse000
setVerbose000
ttl1.040.211.80
ttm0.580.181.08
tucker20.07 5.0243.15
unfold0.270.060.48
unmatvec0.530.111.02
vec0.280.020.36