############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD check --install=check:RNASeqRData.install-out.txt --library=/home/biocbuild/bbs-3.16-bioc/R/site-library --timings RNASeqRData_1.16.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.16-data-experiment/meat/RNASeqRData.Rcheck’ * using R version 4.2.3 (2023-03-15) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * checking for file ‘RNASeqRData/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘RNASeqRData’ version ‘1.16.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘RNASeqRData’ can be installed ... WARNING Found the following significant warnings: Warning: Package 'RNASeqRData' is deprecated and will be removed from See ‘/home/biocbuild/bbs-3.16-data-experiment/meat/RNASeqRData.Rcheck/00install.out’ for details. * checking installed package size ... NOTE installed size is 69.4Mb sub-directories of 1Mb or more: extdata 68.5Mb * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking for missing documentation entries ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... NOTE Package has no Sweave vignette sources and no VignetteBuilder field. * checking examples ... NONE * checking PDF version of manual ... OK * DONE Status: 1 WARNING, 2 NOTEs See ‘/home/biocbuild/bbs-3.16-data-experiment/meat/RNASeqRData.Rcheck/00check.log’ for details.