##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf vsclust.buildbin-libdir && mkdir vsclust.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh vsclust_1.0.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R vsclust.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=vsclust.buildbin-libdir vsclust_1.0.0.tar.gz'
>>>>>>> 

* installing *source* package ‘vsclust’ ...
** using staged installation
** libs
clang++ -mmacosx-version-min=10.13 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c RcppExports.cpp -o RcppExports.o
clang++ -mmacosx-version-min=10.13 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c vsclust_algo.cpp -o vsclust_algo.o
vsclust_algo.cpp:115:12: warning: unused variable 'epsilon' [-Wunused-variable]
    double epsilon = 0.00001;
           ^
1 warning generated.
clang++ -mmacosx-version-min=10.13 -std=gnu++14 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o vsclust.so RcppExports.o vsclust_algo.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-3.16-bioc/meat/vsclust.buildbin-libdir/00LOCK-vsclust/00new/vsclust/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (vsclust)


>>>>>>> 
>>>>>>> FIXING LINKS FOR vsclust.buildbin-libdir/vsclust/libs/vsclust.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libgcc_s.1.dylib" "vsclust.buildbin-libdir/vsclust/libs/vsclust.so"
install_name_tool -change "/usr/local/lib/libgfortran.5.dylib" "/Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libgfortran.5.dylib" "vsclust.buildbin-libdir/vsclust/libs/vsclust.so"
install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libquadmath.0.dylib" "vsclust.buildbin-libdir/vsclust/libs/vsclust.so"