############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data subSeq ### ############################################################################## ############################################################################## * checking for file ‘subSeq/DESCRIPTION’ ... OK * preparing ‘subSeq’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘subSeq.Rnw’ using knitr Quitting from lines 85-86 (subSeq.Rnw) Error: processing vignette 'subSeq.Rnw' failed with diagnostics: there is no package called 'edgeR' --- failed re-building ‘subSeq.Rnw’ SUMMARY: processing the following file failed: ‘subSeq.Rnw’ Error: Vignette re-building failed. Execution halted