Back to Multiple platform build/check report for BioC 3.16:   simplified   long
ABCDEFGHIJKLM[N]OPQRSTUVWXYZ

This page was generated on 2023-04-12 11:05:43 -0400 (Wed, 12 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4502
palomino4Windows Server 2022 Datacenterx644.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle" 4282
lconwaymacOS 12.5.1 Montereyx86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4310
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for netresponse on palomino4


To the developers/maintainers of the netresponse package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/netresponse.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1347/2183HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
netresponse 1.58.0  (landing page)
Leo Lahti
Snapshot Date: 2023-04-10 14:00:05 -0400 (Mon, 10 Apr 2023)
git_url: https://git.bioconductor.org/packages/netresponse
git_branch: RELEASE_3_16
git_last_commit: acfe5bc
git_last_commit_date: 2022-11-01 11:05:19 -0400 (Tue, 01 Nov 2022)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.5.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: netresponse
Version: 1.58.0
Command: rm -rf netresponse.buildbin-libdir && mkdir netresponse.buildbin-libdir && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL --build --library=netresponse.buildbin-libdir netresponse_1.58.0.tar.gz
StartedAt: 2023-04-11 08:24:45 -0400 (Tue, 11 Apr 2023)
EndedAt: 2023-04-11 08:25:11 -0400 (Tue, 11 Apr 2023)
EllapsedTime: 26.6 seconds
RetCode: 0
Status:   OK  
PackageFile: netresponse_1.58.0.zip
PackageFileSize: 1.306 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf netresponse.buildbin-libdir && mkdir netresponse.buildbin-libdir && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL --build --library=netresponse.buildbin-libdir netresponse_1.58.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'netresponse' ...
** using staged installation
** libs
gcc  -I"F:/biocbuild/bbs-3.16-bioc/R/include" -DNDEBUG     -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c netresponse.c -o netresponse.o
netresponse.c: In function 'mHPpost':
netresponse.c:264:15: warning: unused variable 'prior_fields' [-Wunused-variable]
  264 |   const char *prior_fields[]={"Mumu","S2mu",
      |               ^~~~~~~~~~~~
netresponse.c: In function 'mLogLambda':
netresponse.c:713:3: warning: 'U_p' may be used uninitialized in this function [-Wmaybe-uninitialized]
  713 |   vdp_mk_log_lambda(Mumu, S2mu, Mubar, Mutilde,
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  714 |       AlphaKsi, BetaKsi, KsiAlpha, KsiBeta,
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  715 |       post_gamma, log_lambda, prior_alpha,
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  716 |       U_p, U_hat,
      |       ~~~~~~~~~~~
  717 |       datalen, dim1, dim2, data1, data2,
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  718 |       Ns, ncentroids, implicitnoisevar);
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
netresponse.c:713:3: warning: 'KsiBeta' may be used uninitialized in this function [-Wmaybe-uninitialized]
netresponse.c:713:3: warning: 'KsiAlpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
netresponse.c:713:3: warning: 'BetaKsi' may be used uninitialized in this function [-Wmaybe-uninitialized]
netresponse.c:713:3: warning: 'AlphaKsi' may be used uninitialized in this function [-Wmaybe-uninitialized]
netresponse.c:713:3: warning: 'Mutilde' may be used uninitialized in this function [-Wmaybe-uninitialized]
netresponse.c:713:3: warning: 'Mubar' may be used uninitialized in this function [-Wmaybe-uninitialized]
netresponse.c:713:3: warning: 'S2mu' may be used uninitialized in this function [-Wmaybe-uninitialized]
netresponse.c:713:3: warning: 'Mumu' may be used uninitialized in this function [-Wmaybe-uninitialized]
gcc -shared -s -static-libgcc -o netresponse.dll tmp.def netresponse.o -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.16-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.16-bioc/meat/netresponse.buildbin-libdir/00LOCK-netresponse/00new/netresponse/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'netresponse' as netresponse_1.58.0.zip
* DONE (netresponse)