############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD INSTALL maanova ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.16-bioc/R/site-library’ * installing *source* package ‘maanova’ ... ** using staged installation ** libs gcc -I"/home/biocbuild/bbs-3.16-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c makeratio.c -o makeratio.o gcc -I"/home/biocbuild/bbs-3.16-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c masvd.c -o masvd.o masvd.c:114:2: warning: "/*" within comment [-Wcomment] 114 | /* work on a copy of x */ | masvd.c:154:1: warning: "/*" within comment [-Wcomment] 154 | /*#ifndef IEEE_754 | masvd.c:161:5: warning: "/*" within comment [-Wcomment] 161 | /* work on a copy of x */ | masvd.c:165:2: warning: "/*" within comment [-Wcomment] 165 | /* ask for optimal size of work array */ | masvd.c:189:2: warning: "/*" within comment [-Wcomment] 189 | /* ask for optimal size of work array */ | gcc -I"/home/biocbuild/bbs-3.16-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c shift.c -o shift.o shift.c: In function ‘shift’: shift.c:27:13: warning: unused variable ‘k’ [-Wunused-variable] 27 | int i, j, k; | ^ gcc -I"/home/biocbuild/bbs-3.16-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c util.c -o util.o gcc -shared -L/home/biocbuild/bbs-3.16-bioc/R/lib -L/usr/local/lib -o maanova.so makeratio.o masvd.o shift.o util.o -L/home/biocbuild/bbs-3.16-bioc/R/lib -lRlapack -L/home/biocbuild/bbs-3.16-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.16-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.16-bioc/R/site-library/00LOCK-maanova/00new/maanova/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (maanova)