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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data gsean
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* checking for file ‘gsean/DESCRIPTION’ ... OK
* preparing ‘gsean’:
* checking DESCRIPTION meta-information ... OK
* installing the package to process help pages
* saving partial Rd database
* creating vignettes ... ERROR
--- re-building ‘gsean.Rmd’ using rmarkdown
Loading required package: fgsea
Loading required package: PPInfer
Loading required package: biomaRt
Loading required package: kernlab
Loading required package: ggplot2

Attaching package: 'ggplot2'

The following object is masked from 'package:kernlab':

    alpha

Loading required package: igraph

Attaching package: 'igraph'

The following objects are masked from 'package:stats':

    decompose, spectrum

The following object is masked from 'package:base':

    union

Loading required package: STRINGdb
Loading required package: yeastExpData
Loading required package: graph
Loading required package: BiocGenerics

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:igraph':

    normalize, path, union

The following object is masked from 'package:kernlab':

    type

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
    pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
    tapply, union, unique, unsplit, which.max, which.min


Attaching package: 'graph'

The following objects are masked from 'package:igraph':

    degree, edges, intersection

Quitting from lines 92-132 (gsean.Rmd) 
Error: processing vignette 'gsean.Rmd' failed with diagnostics:
there is no package called 'pasilla'
--- failed re-building ‘gsean.Rmd’

SUMMARY: processing the following file failed:
  ‘gsean.Rmd’

Error: Vignette re-building failed.
Execution halted