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This page was generated on 2023-04-12 11:06:04 -0400 (Wed, 12 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4502
palomino4Windows Server 2022 Datacenterx644.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle" 4282
lconwaymacOS 12.5.1 Montereyx86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4310
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for ctgGEM on lconway


To the developers/maintainers of the ctgGEM package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ctgGEM.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 452/2183HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ctgGEM 1.10.0  (landing page)
USD Biomedical Engineering
Snapshot Date: 2023-04-10 14:00:05 -0400 (Mon, 10 Apr 2023)
git_url: https://git.bioconductor.org/packages/ctgGEM
git_branch: RELEASE_3_16
git_last_commit: 4e46726
git_last_commit_date: 2022-11-01 11:21:23 -0400 (Tue, 01 Nov 2022)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  ERROR    ERROR  skipped
palomino4Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped
lconwaymacOS 12.5.1 Monterey / x86_64  ERROR    ERROR  skippedskipped

Summary

Package: ctgGEM
Version: 1.10.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL ctgGEM
StartedAt: 2023-04-10 15:20:48 -0400 (Mon, 10 Apr 2023)
EndedAt: 2023-04-10 15:20:49 -0400 (Mon, 10 Apr 2023)
EllapsedTime: 0.5 seconds
RetCode: 1
Status:   ERROR  

Command output

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### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL ctgGEM
###
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library’
* installing *source* package ‘ctgGEM’ ...
** using staged installation
** R
Error in .install_package_code_files(".", instdir) : 
files in 'Collate' field missing from '/Users/biocbuild/bbs-3.16-bioc/meat/ctgGEM/R':
  zzz.R
ERROR: unable to collate and parse R files for package ‘ctgGEM’
* removing ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library/ctgGEM’