############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf alevinQC.buildbin-libdir && mkdir alevinQC.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh alevinQC_1.13.1.tar.gz /Library/Frameworks/R.framework/Resources/bin/R alevinQC.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=alevinQC.buildbin-libdir alevinQC_1.13.1.tar.gz' >>>>>>> * installing *source* package ‘alevinQC’ ... ** using staged installation ** libs clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c convert_permit_freq.cpp -o convert_permit_freq.o clang++ -arch arm64 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o alevinQC.so RcppExports.o convert_permit_freq.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.16-bioc/meat/alevinQC.buildbin-libdir/00LOCK-alevinQC/00new/alevinQC/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (alevinQC) >>>>>>> >>>>>>> FIXING LINKS FOR alevinQC.buildbin-libdir/alevinQC/libs/alevinQC.so >>>>>>> ERROR: R installation problem: File /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libgcc_s.1.dylib not found!