############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data RcisTarget ### ############################################################################## ############################################################################## * checking for file ‘RcisTarget/DESCRIPTION’ ... OK * preparing ‘RcisTarget’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘RcisTarget_MainTutorial.Rmd’ using rmarkdown --- finished re-building ‘RcisTarget_MainTutorial.Rmd’ --- re-building ‘Tutorial_AnalysisOfGenomicRegions.Rmd’ using rmarkdown trying URL 'https://gbiomed.kuleuven.be/apps/lcb/i-cisTarget/examples/input_files/human/peaks/Encode_GATA1_peaks.bed' Content type 'application/vnd.realvnc.bed' length 23897 bytes (23 KB) ================================================== downloaded 23 KB Quitting from lines 32-35 (Tutorial_AnalysisOfGenomicRegions.Rmd) Error: processing vignette 'Tutorial_AnalysisOfGenomicRegions.Rmd' failed with diagnostics: there is no package called 'rtracklayer' --- failed re-building ‘Tutorial_AnalysisOfGenomicRegions.Rmd’ --- re-building ‘Tutorial_AnalysisWithBackground.Rmd’ using rmarkdown --- finished re-building ‘Tutorial_AnalysisWithBackground.Rmd’ SUMMARY: processing the following file failed: ‘Tutorial_AnalysisOfGenomicRegions.Rmd’ Error: Vignette re-building failed. Execution halted