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This page was generated on 2023-04-12 11:05:24 -0400 (Wed, 12 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4502
palomino4Windows Server 2022 Datacenterx644.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle" 4282
lconwaymacOS 12.5.1 Montereyx86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4310
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for ACME on palomino4


To the developers/maintainers of the ACME package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ACME.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 13/2183HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ACME 2.54.0  (landing page)
Sean Davis
Snapshot Date: 2023-04-10 14:00:05 -0400 (Mon, 10 Apr 2023)
git_url: https://git.bioconductor.org/packages/ACME
git_branch: RELEASE_3_16
git_last_commit: 8d39d9d
git_last_commit_date: 2022-11-01 11:03:24 -0400 (Tue, 01 Nov 2022)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.5.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: ACME
Version: 2.54.0
Command: rm -rf ACME.buildbin-libdir && mkdir ACME.buildbin-libdir && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL --build --library=ACME.buildbin-libdir ACME_2.54.0.tar.gz
StartedAt: 2023-04-11 07:31:28 -0400 (Tue, 11 Apr 2023)
EndedAt: 2023-04-11 07:31:52 -0400 (Tue, 11 Apr 2023)
EllapsedTime: 23.6 seconds
RetCode: 0
Status:   OK  
PackageFile: ACME_2.54.0.zip
PackageFileSize: 9.988 MiB

Command output

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###
### Running command:
###
###   rm -rf ACME.buildbin-libdir && mkdir ACME.buildbin-libdir && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL --build --library=ACME.buildbin-libdir ACME_2.54.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'ACME' ...
** using staged installation
** libs
gcc  -I"F:/biocbuild/bbs-3.16-bioc/R/include" -DNDEBUG     -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c windowChisq.c -o windowChisq.o
windowChisq.c: In function 'windowChisq':
windowChisq.c:58:14: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses]
   58 |    firstprobe>0) {
      |    ~~~~~~~~~~^~
windowChisq.c:63:13: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses]
   63 |    lastprobe<(na-1)) {
      |    ~~~~~~~~~^~~~~~~
windowChisq.c:21:11: warning: unused variable 'xa' [-Wunused-variable]
   21 |   double *xa,*xlocations,*xchivals;
      |           ^~
windowChisq.c: At top level:
windowChisq.c:86:20: warning: initialization of 'void * (*)(void)' from incompatible pointer type 'struct SEXPREC * (*)(struct SEXPREC *, struct SEXPREC *, struct SEXPREC *, struct SEXPREC *, struct SEXPREC *)' [-Wincompatible-pointer-types]
   86 |     {"windowChisq",&windowChisq,5},
      |                    ^
windowChisq.c:86:20: note: (near initialization for 'callMethods[0].fun')
gcc -shared -s -static-libgcc -o ACME.dll tmp.def windowChisq.o -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.16-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.16-bioc/meat/ACME.buildbin-libdir/00LOCK-ACME/00new/ACME/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'ACME' as ACME_2.54.0.zip
* DONE (ACME)