############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf treekoR.buildbin-libdir && mkdir treekoR.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=treekoR.buildbin-libdir treekoR_1.3.1.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'treekoR' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'treekoR' finding HTML links ... done DeBiasi_COVID_CD8_samp html addFreqBars html addHeatMap html addTree html colourTree html findChildren html geometricMean html getCellGMeans html getCellProp html getClusterTree html getParentProp html getTotalProp html getTreeResults html hopachToPhylo html plotInteractiveHeatmap html plotSigScatter html runEdgeRTests html runGLMMTests html runHOPACH html testTree html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'treekoR' as treekoR_1.3.1.zip * DONE (treekoR)