############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL tradeSeq ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'tradeSeq' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'tradeSeq' finding HTML links ... done associationTest html celltype html clusterExpressionPatterns html conditionTest html countMatrix html crv html diffEndTest html earlyDETest html evaluateK html fitGAM html gamList html getSmootherPvalues html getSmootherTestStats html nknots html patternTest html plotGeneCount html finding level-2 HTML links ... done plotSmoothers html plot_evalutateK_results html predictCells html predictSmooth html sds html startVsEndTest html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tradeSeq) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'simplifyEnrichment' is missing or broken done