############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf trackViewer.buildbin-libdir && mkdir trackViewer.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=trackViewer.buildbin-libdir trackViewer_1.31.2.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'trackViewer' ... ** using staged installation ** libs "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition -c RcppExports.cpp -o RcppExports.o "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition -c hic.cpp -o hic.o hic.cpp: In member function 'void HicFileHead::readHeader(std::ifstream&)': hic.cpp:247:16: warning: unused variable 'nviPosition' [-Wunused-variable] long nviPosition = readLong(ifile); ^~~~~~~~~~~ hic.cpp:248:16: warning: unused variable 'nviLength' [-Wunused-variable] long nviLength = readLong(ifile); ^~~~~~~~~ hic.cpp: In function 'std::vector getByCoor(std::__cxx11::string, int, int, std::__cxx11::string, int, int, int, std::__cxx11::string, std::__cxx11::string, HicFileHead&, HicFileFoot&, std::ifstream&)': hic.cpp:751:19: warning: '*((void*)& bd +8)' may be used uninitialized in this function [-Wmaybe-uninitialized] for(int i=0; i