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This page was generated on 2022-03-18 11:08:54 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for tRanslatome on riesling1


To the developers/maintainers of the tRanslatome package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/tRanslatome.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1993/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
tRanslatome 1.33.0  (landing page)
Toma Tebaldi , Erik Dassi
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/tRanslatome
git_branch: master
git_last_commit: cdad2f0
git_last_commit_date: 2021-10-26 12:08:16 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    WARNINGS    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  NO, package depends on 'topGO' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: tRanslatome
Version: 1.33.0
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL tRanslatome
StartedAt: 2022-03-17 16:01:22 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 16:02:24 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 62.3 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL tRanslatome
###
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'tRanslatome' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
** help
*** installing help indices
  converting help for package 'tRanslatome'
    finding HTML links ... done
    CVplot                                  html  
    DEGs                                    html  
    DEGs.table                              html  
    EnrichedSets                            html  
    FC.threshold                            html  
    GOComparison                            html  
    GOEnrichment                            html  
    GOsets                                  html  
    GOsims                                  html  
    Heatmap                                 html  
    Histogram                               html  
    IdentityPlot                            html  
    MAplot                                  html  
    Radar                                   html  
    RegulatoryEnrichment                    html  
    SDplot                                  html  
    Scatterplot                             html  
    SimilarityPlot                          html  
    TranslatomeDataset                      html  
    average.similarity.scores               html  
    computeDEGs                             html  
    enriched.table                          html  
    getConditionA                           html  
    getConditionB                           html  
    getConditionC                           html  
    getConditionD                           html  
    getConditionLabels                      html  
    getDEGs                                 html  
    getDEGsMethod                           html  
    getDataType                             html  
    getExprMatrix                           html  
    getLevelLabels                          html  
    identity.matrix                         html  
    label.condition                         html  
    label.level.DEGs                        html  
    label.level.enriched                    html  
    newTranslatomeDataset                   html  
    significance.threshold                  html  
    similarity.matrix                       html  
    tRanslatome-package                     html  
    tRanslatomeSampleData                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
** testing if installed package can be loaded from final location

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
** testing if installed package keeps a record of temporary installation path
* DONE (tRanslatome)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'PAA' is missing or broken
 done