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### Running command:
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###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL tLOH
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'tLOH' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'tLOH'
    finding HTML links ... done
    aggregateCHRPlot                        html  
    alleleFrequencyPlot                     html  
    humanGBMsampleAC                        html  
    marginalM1Calc                          html  
    marginalM2CalcBHET                      html  
    marginalM2CalcBLOH                      html  
    removeOutlierFromCalc                   html  
    tLOHCalc                                html  
    tLOHDataImport                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (tLOH)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'bnem' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'NanoMethViz' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'nempi' is missing or broken
 done