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### Running command:
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###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL stageR
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'stageR' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'stageR'
    finding HTML links ... done
    adjustedAlphaLevel                      html  
    esetProstate                            html  
    getAdjustedPValues                      html  
    finding level-2 HTML links ... done

Rd warning: D:/biocbuild/bbs-3.15-bioc/meat/stageR/man/getAdjustedPValues.Rd:34: missing link 'stageWiseAdjustment,stageR,character,numeric-method'
    getAlpha                                html  
    getMethod                               html  
    getPConfirmation                        html  
    getPScreen                              html  
    getResults                              html  
    getSignificantGenes                     html  
    getSignificantTx                        html  
    getTx2gene                              html  
    hammer.eset                             html  
    isAdjusted                              html  
    isPScreenAdjusted                       html  
    stageR                                  html  
    stageRClass                             html  
Rd warning: D:/biocbuild/bbs-3.15-bioc/meat/stageR/man/stageRClass.Rd:19: missing link 'getAdjustedPValues,stageR,logical,logical-method'
Rd warning: D:/biocbuild/bbs-3.15-bioc/meat/stageR/man/stageRClass.Rd:19: missing link 'getResults,stageR-method'
    stageRTx                                html  
    stageWiseAdjustment                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (stageR)
Making 'packages.html' ... done