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### Running command:
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###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL recoup
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'recoup' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'recoup'
    finding HTML links ... done
    buildAnnotationDatabase                 html  
    buildAnnotationStore                    html  
    buildCustomAnnotation                   html  
    calcCoverage                            html  
    coverageRef                             html  
    finding level-2 HTML links ... done

    coverageRnaRef                          html  
    getAnnotation                           html  
    getBiotypes                             html  
    getInstalledAnnotations                 html  
    importCustomAnnotation                  html  
    kmeansDesign                            html  
    loadAnnotation                          html  
    mergeRuns                               html  
    preprocessRanges                        html  
    profileMatrix                           html  
    recoup-defunct                          html  
    recoup-deprecated                       html  
    recoup                                  html  
    recoupCorrelation                       html  
    recoupHeatmap                           html  
    recoupPlot                              html  
    recoupProfile                           html  
    recoup_test_data                        html  
    removeData                              html  
    rpMatrix                                html  
    simpleGetSet                            html  
    sliceObj                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (recoup)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'RJMCMCNucleosomes' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'wavClusteR' is missing or broken
 done